RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 WFDC1Q9HC57 220 aa15.34■□□□□ 0.05
U2AF1-202ENST00000380276 SERTM2A0A1B0GWG4 89 aa15.33■□□□□ 0.04
U2AF1-202ENST00000380276 C1QBP02746 253 aa15.33■□□□□ 0.04
U2AF1-202ENST00000380276 ARL14EPLP0DKL9 152 aa15.33■□□□□ 0.04
U2AF1-202ENST00000380276 C9orf85Q96MD7 179 aa15.33■□□□□ 0.04
U2AF1-202ENST00000380276 PSG8Q9UQ74 426 aa15.33■□□□□ 0.04
U2AF1-202ENST00000380276 UPK1BO75841 260 aa15.32■□□□□ 0.04
U2AF1-202ENST00000380276 CDC34P49427 236 aaPredicted RBP15.32■□□□□ 0.04
U2AF1-202ENST00000380276 PRNTQ86SH4 94 aa15.32■□□□□ 0.04
U2AF1-202ENST00000380276 DNAH8Q96JB1 4490 aa15.31■□□□□ 0.04
U2AF1-202ENST00000380276 TRAV8-3A0A0A6YYJ7 113 aa15.31■□□□□ 0.04
U2AF1-202ENST00000380276 TCRAP04437 139 aa15.31■□□□□ 0.04
U2AF1-202ENST00000380276 SMUG1Q53HV7 270 aa15.31■□□□□ 0.04
U2AF1-202ENST00000380276 C5orf17Q8NAS9 161 aa15.31■□□□□ 0.04
U2AF1-202ENST00000380276 S100A4P26447 101 aaKnown RBP15.3■□□□□ 0.04
U2AF1-202ENST00000380276 LGALSLQ3ZCW2 172 aaPredicted RBP15.3■□□□□ 0.04
U2AF1-202ENST00000380276 DAZ4Q86SG3 579 aaKnown RBP15.3■□□□□ 0.04
U2AF1-202ENST00000380276 SH3BGRL3Q9H299 93 aa15.3■□□□□ 0.04
U2AF1-202ENST00000380276 DAZ3Q9NR90 486 aaKnown RBP15.3■□□□□ 0.04
U2AF1-202ENST00000380276 GGTLC3B5MD39 225 aa15.29■□□□□ 0.04
U2AF1-202ENST00000380276 TOR2AQ5JU69 321 aa15.29■□□□□ 0.04
U2AF1-202ENST00000380276 BAALCQ8WXS3 180 aa15.29■□□□□ 0.04
U2AF1-202ENST00000380276 RNASE3P12724 160 aaKnown RBP15.28■□□□□ 0.04
U2AF1-202ENST00000380276 FLI1Q01543 452 aaPredicted RBP15.28■□□□□ 0.04
U2AF1-202ENST00000380276 LINC01620Q4KN68 170 aa15.28■□□□□ 0.04
U2AF1-202ENST00000380276 OR2T35Q8NGX2 323 aa15.28■□□□□ 0.04
U2AF1-202ENST00000380276 PARLQ9H300 379 aa15.28■□□□□ 0.04
U2AF1-202ENST00000380276 SUMO1P63165 101 aaKnown RBP15.27■□□□□ 0.04
U2AF1-202ENST00000380276 Q6ZSA8 131 aa15.27■□□□□ 0.04
U2AF1-202ENST00000380276 LINC00299Q6ZSB3 139 aa15.27■□□□□ 0.04
U2AF1-202ENST00000380276 HSD17B11Q8NBQ5 300 aa15.27■□□□□ 0.04
U2AF1-202ENST00000380276 DEFB104AQ8WTQ1 72 aa15.27■□□□□ 0.04
U2AF1-202ENST00000380276 PTH2Q96A98 100 aa15.27■□□□□ 0.04
U2AF1-202ENST00000380276 RBFOX3A6NFN3 312 aa15.26■□□□□ 0.03
U2AF1-202ENST00000380276 STAG3L2P0CL84 134 aa15.26■□□□□ 0.03
U2AF1-202ENST00000380276 STAG3L3P0CL85 134 aa15.26■□□□□ 0.03
U2AF1-202ENST00000380276 GCHFRP30047 84 aa15.26■□□□□ 0.03
U2AF1-202ENST00000380276 URGCP-MRPS24S4R325 110 aa15.26■□□□□ 0.03
U2AF1-202ENST00000380276 A8MWV9 139 aa15.25■□□□□ 0.03
U2AF1-202ENST00000380276 IFITM3Q01628 133 aa15.25■□□□□ 0.03
U2AF1-202ENST00000380276 CYB561D1Q8N8Q1 229 aa15.25■□□□□ 0.03
U2AF1-202ENST00000380276 MARVELD1Q9BSK0 173 aa15.25■□□□□ 0.03
U2AF1-202ENST00000380276 EPDR1Q9UM22 224 aa15.25■□□□□ 0.03
U2AF1-202ENST00000380276 KRTAP29-1A8MX34 341 aaPredicted RBP15.24■□□□□ 0.03
U2AF1-202ENST00000380276 ASIPP42127 132 aa15.24■□□□□ 0.03
U2AF1-202ENST00000380276 RAB24Q969Q5 203 aa15.24■□□□□ 0.03
U2AF1-202ENST00000380276 RMI2Q96E14 147 aa15.24■□□□□ 0.03
U2AF1-202ENST00000380276 IGKV2D-24A0A075B6R9 120 aa15.23■□□□□ 0.03
U2AF1-202ENST00000380276 IGLV2-11P01706 119 aa15.23■□□□□ 0.03
U2AF1-202ENST00000380276 SAPCD1Q5SSQ6 148 aa15.23■□□□□ 0.03
U2AF1-202ENST00000380276 ZFP2Q6ZN57 461 aa15.23■□□□□ 0.03
U2AF1-202ENST00000380276 SCXQ7RTU7 201 aa15.23■□□□□ 0.03
U2AF1-202ENST00000380276 SAMD10Q9BYL1 202 aa15.23■□□□□ 0.03
U2AF1-202ENST00000380276 JPT2Q9H910 190 aa15.23■□□□□ 0.03
U2AF1-202ENST00000380276 COX11Q9Y6N1 276 aa15.23■□□□□ 0.03
U2AF1-202ENST00000380276 A0A087WWC5 75 aa15.22■□□□□ 0.03
U2AF1-202ENST00000380276 FGF8P55075 233 aaPredicted RBP15.22■□□□□ 0.03
U2AF1-202ENST00000380276 C14orf178Q8N769 122 aaPredicted RBP15.22■□□□□ 0.03
U2AF1-202ENST00000380276 TMEM167BQ9NRX6 74 aa15.22■□□□□ 0.03
U2AF1-202ENST00000380276 TRAV34A0A0B4J273 112 aa15.21■□□□□ 0.03
U2AF1-202ENST00000380276 LINC00694P0DN24 101 aa15.21■□□□□ 0.03
U2AF1-202ENST00000380276 Q9UF83 564 aa15.21■□□□□ 0.03
U2AF1-202ENST00000380276 IGKV3D-20A0A0C4DH25 116 aa15.2■□□□□ 0.02
U2AF1-202ENST00000380276 CXorf1O96002 111 aa15.2■□□□□ 0.02
U2AF1-202ENST00000380276 OR2G3Q8NGZ4 309 aa15.2■□□□□ 0.02
U2AF1-202ENST00000380276 H3BVH4 76 aa15.19■□□□□ 0.02
U2AF1-202ENST00000380276 DEFA1P59665 94 aa15.19■□□□□ 0.02
U2AF1-202ENST00000380276 DEFA3P59666 94 aa15.19■□□□□ 0.02
U2AF1-202ENST00000380276 FAM74A4Q5TZK3 123 aa15.19■□□□□ 0.02
U2AF1-202ENST00000380276 Q8N976 141 aa15.19■□□□□ 0.02
U2AF1-202ENST00000380276 SYT8Q8NBV8 401 aa15.19■□□□□ 0.02
U2AF1-202ENST00000380276 SUN5Q8TC36 379 aa15.19■□□□□ 0.02
U2AF1-202ENST00000380276 DNAJC30Q96LL9 226 aa15.19■□□□□ 0.02
U2AF1-202ENST00000380276 LINC00479Q96M42 142 aa15.19■□□□□ 0.02
U2AF1-202ENST00000380276 KLK12Q9UKR0 248 aa15.19■□□□□ 0.02
U2AF1-202ENST00000380276 FABP5P3A8MUU1 101 aa15.18■□□□□ 0.02
U2AF1-202ENST00000380276 B4DEV8 164 aa15.18■□□□□ 0.02
U2AF1-202ENST00000380276 IFNA7P01567 189 aa15.18■□□□□ 0.02
U2AF1-202ENST00000380276 MBP02144 154 aa15.18■□□□□ 0.02
U2AF1-202ENST00000380276 SEC11BP0C7V7 166 aa15.18■□□□□ 0.02
U2AF1-202ENST00000380276 ATP6V0CP27449 155 aa15.18■□□□□ 0.02
U2AF1-202ENST00000380276 KCNIP4Q6PIL6 250 aa15.18■□□□□ 0.02
U2AF1-202ENST00000380276 UBE2WQ96B02 151 aa15.18■□□□□ 0.02
U2AF1-202ENST00000380276 ACTR3CQ9C0K3 210 aaPredicted RBP15.18■□□□□ 0.02
U2AF1-202ENST00000380276 ARL2-SNX15V9GYD0 113 aa15.18■□□□□ 0.02
U2AF1-202ENST00000380276 PSMG3Q9BT73 122 aaPredicted RBP15.17■□□□□ 0.02
U2AF1-202ENST00000380276 A0A087WX48 190 aa15.16■□□□□ 0.02
U2AF1-202ENST00000380276 M0R036 132 aa15.16■□□□□ 0.02
U2AF1-202ENST00000380276 RHODO00212 210 aa15.16■□□□□ 0.02
U2AF1-202ENST00000380276 PIK3CD-AS1Q5SR53 167 aa15.16■□□□□ 0.02
U2AF1-202ENST00000380276 NIT1Q86X76 327 aa15.16■□□□□ 0.02
U2AF1-202ENST00000380276 IL36BQ9NZH7 164 aa15.16■□□□□ 0.02
U2AF1-202ENST00000380276 GRIFINA4D1Z8 144 aa15.15■□□□□ 0.02
U2AF1-202ENST00000380276 UBE2G2P60604 165 aa15.15■□□□□ 0.02
U2AF1-202ENST00000380276 OR11H4Q8NGC9 324 aa15.15■□□□□ 0.02
U2AF1-202ENST00000380276 CHAC1Q9BUX1 264 aa15.15■□□□□ 0.02
U2AF1-202ENST00000380276 A0A087WWL8 130 aa15.14■□□□□ 0.01
U2AF1-202ENST00000380276 ARMS2P0C7Q2 107 aa15.14■□□□□ 0.01
U2AF1-202ENST00000380276 SERF2P84101 59 aa15.14■□□□□ 0.01
U2AF1-202ENST00000380276 UFSP1Q6NVU6 142 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms