RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 RHPN1-AS1Q9BWJ2 59 aa11.7□□□□□ -0.54
CCDC40-202ENST00000374876 DAZ1Q9NQZ3 744 aaKnown RBP11.7□□□□□ -0.54
CCDC40-202ENST00000374876 TNFRSF6BO95407 300 aa11.7□□□□□ -0.54
CCDC40-202ENST00000374876 TM4SF20Q53R12 229 aa11.7□□□□□ -0.54
CCDC40-202ENST00000374876 TCTEX1D4Q5JR98 221 aa11.7□□□□□ -0.54
CCDC40-202ENST00000374876 Q6ZQT7 251 aa11.7□□□□□ -0.54
CCDC40-202ENST00000374876 IGKV3-7A0A075B6H7 116 aa11.69□□□□□ -0.54
CCDC40-202ENST00000374876 J3KRW8 73 aa11.69□□□□□ -0.54
CCDC40-202ENST00000374876 EVI2AP22794 236 aa11.69□□□□□ -0.54
CCDC40-202ENST00000374876 PRR9Q5T870 116 aa11.69□□□□□ -0.54
CCDC40-202ENST00000374876 SPANXN1Q5VSR9 72 aa11.69□□□□□ -0.54
CCDC40-202ENST00000374876 CITED2Q99967 270 aaPredicted RBP11.69□□□□□ -0.54
CCDC40-202ENST00000374876 SCRT2Q9NQ03 307 aa11.69□□□□□ -0.54
CCDC40-202ENST00000374876 PEF1Q9UBV8 284 aaKnown RBP11.69□□□□□ -0.54
CCDC40-202ENST00000374876 GAS8-AS1O95177 125 aa11.69□□□□□ -0.54
CCDC40-202ENST00000374876 CACNG7P62955 275 aa11.69□□□□□ -0.54
CCDC40-202ENST00000374876 TMEM208Q9BTX3 173 aa11.69□□□□□ -0.54
CCDC40-202ENST00000374876 NXT2Q9NPJ8 142 aaKnown RBP11.69□□□□□ -0.54
CCDC40-202ENST00000374876 ZNF580Q9UK33 172 aa11.69□□□□□ -0.54
CCDC40-202ENST00000374876 GOLT1BQ9Y3E0 138 aa11.69□□□□□ -0.54
CCDC40-202ENST00000374876 ANK2Q01484 3957 aa11.69□□□□□ -0.54
CCDC40-202ENST00000374876 TP73-AS1Q9UF72 201 aa11.68□□□□□ -0.54
CCDC40-202ENST00000374876 UFC1Q9Y3C8 167 aa11.68□□□□□ -0.54
CCDC40-202ENST00000374876 TRAV21A0A0B4J279 112 aa11.67□□□□□ -0.54
CCDC40-202ENST00000374876 H3BVH4 76 aa11.67□□□□□ -0.54
CCDC40-202ENST00000374876 SNAI2O43623 268 aa11.67□□□□□ -0.54
CCDC40-202ENST00000374876 ZFAND2AQ8N6M9 145 aa11.67□□□□□ -0.54
CCDC40-202ENST00000374876 IFI27L1Q96BM0 104 aa11.67□□□□□ -0.54
CCDC40-202ENST00000374876 TRRAPQ9Y4A5 3859 aa11.67□□□□□ -0.54
CCDC40-202ENST00000374876 IGHV4-4A0A075B6R2 117 aa11.67□□□□□ -0.54
CCDC40-202ENST00000374876 A0A1W2PRX2 142 aa11.67□□□□□ -0.54
CCDC40-202ENST00000374876 GATA1P15976 413 aaPredicted RBP11.67□□□□□ -0.54
CCDC40-202ENST00000374876 DEFB1P60022 68 aa11.67□□□□□ -0.54
CCDC40-202ENST00000374876 LGALS9BQ3B8N2 356 aa11.67□□□□□ -0.54
CCDC40-202ENST00000374876 LGALS9CQ6DKI2 356 aa11.67□□□□□ -0.54
CCDC40-202ENST00000374876 SMPXQ9UHP9 88 aa11.67□□□□□ -0.54
CCDC40-202ENST00000374876 LINC01546A6NGU7 62 aa11.66□□□□□ -0.54
CCDC40-202ENST00000374876 PSMB8P28062 276 aa11.66□□□□□ -0.54
CCDC40-202ENST00000374876 NSUN5P1Q3KNT7 163 aa11.66□□□□□ -0.54
CCDC40-202ENST00000374876 OR2K2Q8NGT1 345 aa11.66□□□□□ -0.54
CCDC40-202ENST00000374876 K7EMT4 169 aa11.65□□□□□ -0.54
CCDC40-202ENST00000374876 DLEU1O43261 78 aa11.65□□□□□ -0.54
CCDC40-202ENST00000374876 LEPP41159 167 aa11.65□□□□□ -0.54
CCDC40-202ENST00000374876 KHDC1LQ5JSQ8 128 aa11.65□□□□□ -0.54
CCDC40-202ENST00000374876 SELENOKQ9Y6D0 94 aa11.65□□□□□ -0.54
CCDC40-202ENST00000374876 F6UB75 175 aa11.65□□□□□ -0.54
CCDC40-202ENST00000374876 S100A4P26447 101 aaKnown RBP11.64□□□□□ -0.55
CCDC40-202ENST00000374876 FCER1GP30273 86 aa11.64□□□□□ -0.55
CCDC40-202ENST00000374876 RNASE4P34096 147 aaKnown RBP11.64□□□□□ -0.55
CCDC40-202ENST00000374876 GAGE1Q13065 139 aa11.64□□□□□ -0.55
CCDC40-202ENST00000374876 C18orf65Q6ZTR6 163 aa11.64□□□□□ -0.55
CCDC40-202ENST00000374876 Q8N8P6 123 aa11.64□□□□□ -0.55
CCDC40-202ENST00000374876 ADARB2-AS1A8MUL3 147 aa11.64□□□□□ -0.55
CCDC40-202ENST00000374876 ASIPP42127 132 aa11.64□□□□□ -0.55
CCDC40-202ENST00000374876 WFDC3Q8IUB2 231 aa11.64□□□□□ -0.55
CCDC40-202ENST00000374876 FAM19A4Q96LR4 140 aa11.64□□□□□ -0.55
CCDC40-202ENST00000374876 C18orf15Q96N68 181 aa11.64□□□□□ -0.55
CCDC40-202ENST00000374876 TRAV26-2A0A0B4J265 109 aa11.63□□□□□ -0.55
CCDC40-202ENST00000374876 COX8AP10176 69 aa11.63□□□□□ -0.55
CCDC40-202ENST00000374876 ID1P41134 155 aa11.63□□□□□ -0.55
CCDC40-202ENST00000374876 MPV17L2Q567V2 206 aa11.63□□□□□ -0.55
CCDC40-202ENST00000374876 SAMD13Q5VXD3 122 aa11.63□□□□□ -0.55
CCDC40-202ENST00000374876 DPF1Q92782 380 aa11.63□□□□□ -0.55
CCDC40-202ENST00000374876 TSSC4Q9Y5U2 329 aaPredicted RBP11.63□□□□□ -0.55
CCDC40-202ENST00000374876 TRBV7-9A0A0J9YWB2 115 aa11.62□□□□□ -0.55
CCDC40-202ENST00000374876 EDN2P20800 178 aa11.62□□□□□ -0.55
CCDC40-202ENST00000374876 NRACQ8N912 160 aa11.62□□□□□ -0.55
CCDC40-202ENST00000374876 M0R381 172 aa11.62□□□□□ -0.55
CCDC40-202ENST00000374876 NUDT3O95989 172 aa11.62□□□□□ -0.55
CCDC40-202ENST00000374876 ELANEP08246 267 aa11.62□□□□□ -0.55
CCDC40-202ENST00000374876 ANXA2RQ3ZCQ2 193 aa11.62□□□□□ -0.55
CCDC40-202ENST00000374876 NDUFA11Q86Y39 141 aa11.62□□□□□ -0.55
CCDC40-202ENST00000374876 APRG1Q8IVJ8 170 aa11.62□□□□□ -0.55
CCDC40-202ENST00000374876 PHLDA3Q9Y5J5 127 aa11.62□□□□□ -0.55
CCDC40-202ENST00000374876 OR1N2Q8NGR9 330 aa11.61□□□□□ -0.55
CCDC40-202ENST00000374876 MRAP2Q96G30 205 aa11.61□□□□□ -0.55
CCDC40-202ENST00000374876 WNK1Q9H4A3 2382 aa11.61□□□□□ -0.55
CCDC40-202ENST00000374876 IGLV2-18A0A075B6J9 118 aa11.6□□□□□ -0.55
CCDC40-202ENST00000374876 PRSS47A8MTI9 375 aa11.6□□□□□ -0.55
CCDC40-202ENST00000374876 ANKRD39Q53RE8 183 aa11.6□□□□□ -0.55
CCDC40-202ENST00000374876 RNF152Q8N8N0 203 aa11.6□□□□□ -0.55
CCDC40-202ENST00000374876 NPSP0C0P6 89 aa11.6□□□□□ -0.55
CCDC40-202ENST00000374876 KIR3DS1Q14943 382 aa11.6□□□□□ -0.55
CCDC40-202ENST00000374876 DEFB125Q8N687 156 aa11.6□□□□□ -0.55
CCDC40-202ENST00000374876 DCANP1Q8TF63 244 aa11.6□□□□□ -0.55
CCDC40-202ENST00000374876 MED14OSP0DP75 135 aa11.59□□□□□ -0.55
CCDC40-202ENST00000374876 LAGE3Q14657 143 aa11.59□□□□□ -0.55
CCDC40-202ENST00000374876 KLHL30-AS1Q8NEE0 82 aa11.59□□□□□ -0.55
CCDC40-202ENST00000374876 DKK2Q9UBU2 259 aa11.59□□□□□ -0.55
CCDC40-202ENST00000374876 SPRY2O43597 315 aa11.59□□□□□ -0.55
CCDC40-202ENST00000374876 PRSS1P07477 247 aa11.59□□□□□ -0.55
CCDC40-202ENST00000374876 BVES-AS1Q5T3Y7 98 aa11.59□□□□□ -0.55
CCDC40-202ENST00000374876 ORAOV1Q8WV07 137 aa11.59□□□□□ -0.55
CCDC40-202ENST00000374876 VWFP04275 2813 aa11.58□□□□□ -0.56
CCDC40-202ENST00000374876 GNRH2O43555 120 aa11.58□□□□□ -0.56
CCDC40-202ENST00000374876 DUX3Q96PT4 197 aa11.58□□□□□ -0.56
CCDC40-202ENST00000374876 DPH3P1Q9H4G8 78 aa11.58□□□□□ -0.56
CCDC40-202ENST00000374876 COX11Q9Y6N1 276 aa11.58□□□□□ -0.56
CCDC40-202ENST00000374876 SMIM17P0DL12 118 aa11.57□□□□□ -0.56
CCDC40-202ENST00000374876 DEFB136Q30KP8 78 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms