RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 CENPVL3A0A0U1RRI6 287 aa7.1□□□□□ -1.27
SMARCA1-202ENST00000371122 VWC2LB2RUY7 222 aa7.1□□□□□ -1.27
SMARCA1-202ENST00000371122 GP9P14770 177 aa7.1□□□□□ -1.27
SMARCA1-202ENST00000371122 LINC00158P58513 81 aa7.1□□□□□ -1.27
SMARCA1-202ENST00000371122 ETDBQ3ZM63 59 aa7.1□□□□□ -1.27
SMARCA1-202ENST00000371122 MGAM2Q2M2H8 2515 aa7.09□□□□□ -1.27
SMARCA1-202ENST00000371122 IGLV1-47P01700 117 aa7.09□□□□□ -1.27
SMARCA1-202ENST00000371122 PAX2Q02962 417 aa7.09□□□□□ -1.27
SMARCA1-202ENST00000371122 RASL11AQ6T310 242 aa7.09□□□□□ -1.27
SMARCA1-202ENST00000371122 LINC01356Q8N9X3 169 aa7.09□□□□□ -1.27
SMARCA1-202ENST00000371122 IGLV2-23P01705 113 aa7.09□□□□□ -1.27
SMARCA1-202ENST00000371122 UBE2V1Q13404 147 aa7.09□□□□□ -1.27
SMARCA1-202ENST00000371122 ESM1Q9NQ30 184 aa7.09□□□□□ -1.27
SMARCA1-202ENST00000371122 VCYO14598 125 aa7.09□□□□□ -1.27
SMARCA1-202ENST00000371122 CDSNQ15517 529 aa7.09□□□□□ -1.27
SMARCA1-202ENST00000371122 USMG5Q96IX5 58 aa7.09□□□□□ -1.27
SMARCA1-202ENST00000371122 COX11Q9Y6N1 276 aa7.09□□□□□ -1.27
SMARCA1-202ENST00000371122 C19orf84I3L1E1 186 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 LTAP01374 205 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 ESDP10768 282 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 CLPSL2Q6UWE3 100 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 PYGO2Q9BRQ0 406 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 ZNF492Q9P255 531 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 TEX22C9J3V5 150 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 PRSS46E5RG02 174 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 GAGE7O76087 117 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 GAGE12FP0CL80 117 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 GAGE12GP0CL81 117 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 GAGE12IP0CL82 117 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 LOXL1Q08397 574 aaPredicted RBP7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 ANKRD39Q53RE8 183 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 TTC32Q5I0X7 151 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 UNQ9165/PRO28630Q6UXU0 137 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 FAM231DQ6ZW35 169 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 Q8N9W7 124 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 AJUBAQ96IF1 538 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 JPT2Q9H910 190 aa7.08□□□□□ -1.28
SMARCA1-202ENST00000371122 SLURP1P55000 103 aa7.07□□□□□ -1.28
SMARCA1-202ENST00000371122 SEC11AP67812 179 aa7.07□□□□□ -1.28
SMARCA1-202ENST00000371122 IGF2-ASQ6U949 168 aa7.07□□□□□ -1.28
SMARCA1-202ENST00000371122 NCOR1P1Q9H4R4 102 aa7.07□□□□□ -1.28
SMARCA1-202ENST00000371122 TRGV11A0A075B6L2 103 aa7.07□□□□□ -1.28
SMARCA1-202ENST00000371122 IGKV1D-37A0A075B6S9 117 aa7.07□□□□□ -1.28
SMARCA1-202ENST00000371122 A0A087WX48 190 aa7.07□□□□□ -1.28
SMARCA1-202ENST00000371122 ZNRF2Q8NHG8 242 aa7.07□□□□□ -1.28
SMARCA1-202ENST00000371122 ANKRD17O75179 2603 aaKnown RBP7.07□□□□□ -1.28
SMARCA1-202ENST00000371122 CGB3P0DN86 165 aa7.07□□□□□ -1.28
SMARCA1-202ENST00000371122 CGB7P0DN87 165 aa7.07□□□□□ -1.28
SMARCA1-202ENST00000371122 LINC01549A6NIU2 74 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 H3BRM9 83 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 TSPAN13O95857 204 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 PLNP26678 52 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 TEX43Q6ZNM6 134 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 ZNF747Q9BV97 191 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 ERG28Q9UKR5 140 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 FAM223BA6NKX1 122 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 CCL25O15444 150 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 PAX4O43316 350 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 PFN2P35080 140 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 FAM223AQ8IWN6 122 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 OR9G4Q8NGQ1 327 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 PRADC1Q9BSG0 188 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 IGF1P05019 195 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 P0C879 139 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 MALP21145 153 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 FANCD2OSQ96PS1 177 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 GFRA4Q9GZZ7 299 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 IGLV11-55A0A075B6I3 123 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 H3BMG7 143 aa7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 RPL36AP83881 106 aaKnown RBP7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 RPL36ALQ969Q0 106 aaKnown RBP7.06□□□□□ -1.28
SMARCA1-202ENST00000371122 TRAV8-3A0A0A6YYJ7 113 aa7.05□□□□□ -1.28
SMARCA1-202ENST00000371122 HLA-DRB4P13762 266 aa7.05□□□□□ -1.28
SMARCA1-202ENST00000371122 DEFB121Q5J5C9 76 aa7.05□□□□□ -1.28
SMARCA1-202ENST00000371122 GDF5OSQ5U4N7 250 aa7.05□□□□□ -1.28
SMARCA1-202ENST00000371122 PRIMA1Q86XR5 153 aa7.05□□□□□ -1.28
SMARCA1-202ENST00000371122 HLA-DRB4X5D2U9 266 aa7.05□□□□□ -1.28
SMARCA1-202ENST00000371122 BUB3O43684 328 aa7.05□□□□□ -1.28
SMARCA1-202ENST00000371122 NXPH4O95158 308 aa7.05□□□□□ -1.28
SMARCA1-202ENST00000371122 HOXD3P31249 432 aaPredicted RBP7.05□□□□□ -1.28
SMARCA1-202ENST00000371122 ZNF80P51504 273 aaPredicted RBP7.05□□□□□ -1.28
SMARCA1-202ENST00000371122 C10orf99Q6UWK7 81 aa7.05□□□□□ -1.28
SMARCA1-202ENST00000371122 OR11H6Q8NGC7 330 aa7.05□□□□□ -1.28
SMARCA1-202ENST00000371122 TMEM14CQ9P0S9 112 aa7.05□□□□□ -1.28
SMARCA1-202ENST00000371122 ADAMTSL5Q6ZMM2 481 aa7.05□□□□□ -1.28
SMARCA1-202ENST00000371122 GATD1Q8NB37 220 aa7.05□□□□□ -1.28
SMARCA1-202ENST00000371122 IGF2BP2-AS1Q96M15 143 aa7.05□□□□□ -1.28
SMARCA1-202ENST00000371122 SMIM2Q9BVW6 85 aa7.05□□□□□ -1.28
SMARCA1-202ENST00000371122 C9JAW5 83 aa7.04□□□□□ -1.28
SMARCA1-202ENST00000371122 CDKN1BP46527 198 aa7.04□□□□□ -1.28
SMARCA1-202ENST00000371122 RPL39P62891 51 aaKnown RBP7.04□□□□□ -1.28
SMARCA1-202ENST00000371122 BVES-AS1Q5T3Y7 98 aa7.04□□□□□ -1.28
SMARCA1-202ENST00000371122 MUC4Q99102 2169 aa7.04□□□□□ -1.28
SMARCA1-202ENST00000371122 IGHV1OR15-1A0A075B7D0 117 aa7.04□□□□□ -1.28
SMARCA1-202ENST00000371122 SRSF2Q01130 221 aaKnown RBP7.04□□□□□ -1.28
SMARCA1-202ENST00000371122 CT83Q5H943 113 aa7.04□□□□□ -1.28
SMARCA1-202ENST00000371122 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.04□□□□□ -1.28
SMARCA1-202ENST00000371122 IGHV7-4-1A0A0J9YVY3 117 aa7.04□□□□□ -1.28
SMARCA1-202ENST00000371122 IGKV2-29A2NJV5 120 aaPredicted RBP7.04□□□□□ -1.28
SMARCA1-202ENST00000371122 K7EP13 123 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms