RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 KRBOX1C9JBD0 128 aa10.5□□□□□ -0.73
SS18L1-202ENST00000370848 TEX46H3BTG2 121 aa10.5□□□□□ -0.73
SS18L1-202ENST00000370848 ORM1P02763 201 aa10.5□□□□□ -0.73
SS18L1-202ENST00000370848 BCL2P10415 239 aa10.5□□□□□ -0.73
SS18L1-202ENST00000370848 RPL35P42766 123 aaKnown RBP10.5□□□□□ -0.73
SS18L1-202ENST00000370848 ZNF674Q2M3X9 581 aa10.5□□□□□ -0.73
SS18L1-202ENST00000370848 FAM162BQ5T6X4 162 aa10.5□□□□□ -0.73
SS18L1-202ENST00000370848 ZNF575Q86XF7 245 aa10.5□□□□□ -0.73
SS18L1-202ENST00000370848 BAGE2Q86Y30 109 aa10.5□□□□□ -0.73
SS18L1-202ENST00000370848 ZNRF2Q8NHG8 242 aa10.5□□□□□ -0.73
SS18L1-202ENST00000370848 PGPEP1LA6NFU8 196 aa10.49□□□□□ -0.73
SS18L1-202ENST00000370848 MLST8Q9BVC4 326 aa10.49□□□□□ -0.73
SS18L1-202ENST00000370848 LINC00588Q9Y4M8 146 aa10.49□□□□□ -0.73
SS18L1-202ENST00000370848 DNAH5Q8TE73 4624 aa10.48□□□□□ -0.73
SS18L1-202ENST00000370848 A0A096LPF7 62 aa10.48□□□□□ -0.73
SS18L1-202ENST00000370848 TRAV4A0A0B4J268 109 aa10.48□□□□□ -0.73
SS18L1-202ENST00000370848 H3BVH4 76 aa10.48□□□□□ -0.73
SS18L1-202ENST00000370848 PAX4O43316 350 aa10.48□□□□□ -0.73
SS18L1-202ENST00000370848 IFNA1P01562 189 aa10.48□□□□□ -0.73
SS18L1-202ENST00000370848 S100A9P06702 114 aaKnown RBP10.48□□□□□ -0.73
SS18L1-202ENST00000370848 ASIPP42127 132 aa10.48□□□□□ -0.73
SS18L1-202ENST00000370848 CRYBA4P53673 196 aa10.48□□□□□ -0.73
SS18L1-202ENST00000370848 RPL19P84098 196 aaKnown RBP10.48□□□□□ -0.73
SS18L1-202ENST00000370848 MEF2BQ02080 365 aaPredicted RBP10.48□□□□□ -0.73
SS18L1-202ENST00000370848 ZNF876PQ49A33 203 aa10.48□□□□□ -0.73
SS18L1-202ENST00000370848 ZNF506Q5JVG8 444 aa10.48□□□□□ -0.73
SS18L1-202ENST00000370848 OR4C5Q8NGB2 326 aa10.48□□□□□ -0.73
SS18L1-202ENST00000370848 TRGV4A0A0C4DH28 118 aa10.47□□□□□ -0.73
SS18L1-202ENST00000370848 NBDYA0A0U1RRE5 68 aa10.47□□□□□ -0.73
SS18L1-202ENST00000370848 RAB19A4D1S5 217 aa10.47□□□□□ -0.73
SS18L1-202ENST00000370848 S100A4P26447 101 aaKnown RBP10.47□□□□□ -0.73
SS18L1-202ENST00000370848 LINC01559Q495D7 138 aa10.47□□□□□ -0.73
SS18L1-202ENST00000370848 CENPWQ5EE01 88 aa10.47□□□□□ -0.73
SS18L1-202ENST00000370848 PRR27Q6MZM9 219 aa10.47□□□□□ -0.73
SS18L1-202ENST00000370848 PRO0255Q9UI72 69 aa10.47□□□□□ -0.73
SS18L1-202ENST00000370848 HHLA3Q9XRX5 114 aa10.47□□□□□ -0.73
SS18L1-202ENST00000370848 H3BNG1 76 aa10.46□□□□□ -0.73
SS18L1-202ENST00000370848 CDK2AP2O75956 126 aa10.46□□□□□ -0.73
SS18L1-202ENST00000370848 IGLV2-8P01709 118 aa10.46□□□□□ -0.73
SS18L1-202ENST00000370848 BLOC1S1P78537 153 aa10.46□□□□□ -0.73
SS18L1-202ENST00000370848 ESRGQ1W209 222 aa10.46□□□□□ -0.73
SS18L1-202ENST00000370848 CFAP126Q5VTH2 177 aa10.46□□□□□ -0.73
SS18L1-202ENST00000370848 TXNDC17Q9BRA2 123 aa10.46□□□□□ -0.73
SS18L1-202ENST00000370848 MED9Q9NWA0 146 aa10.46□□□□□ -0.73
SS18L1-202ENST00000370848 VAX2Q9UIW0 290 aa10.46□□□□□ -0.73
SS18L1-202ENST00000370848 TRBV20OR9-2A0A075B6H5 130 aa10.45□□□□□ -0.74
SS18L1-202ENST00000370848 IGHV3-73A0A0B4J1V6 119 aa10.45□□□□□ -0.74
SS18L1-202ENST00000370848 LOC100131303A0A0U1RQF7 123 aa10.45□□□□□ -0.74
SS18L1-202ENST00000370848 RS1O15537 224 aa10.45□□□□□ -0.74
SS18L1-202ENST00000370848 ARMS2P0C7Q2 107 aa10.45□□□□□ -0.74
SS18L1-202ENST00000370848 LYPD6BQ8NI32 183 aa10.45□□□□□ -0.74
SS18L1-202ENST00000370848 PCNPQ8WW12 178 aaKnown RBP10.45□□□□□ -0.74
SS18L1-202ENST00000370848 JPT2Q9H910 190 aa10.45□□□□□ -0.74
SS18L1-202ENST00000370848 PDE6DO43924 150 aa10.44□□□□□ -0.74
SS18L1-202ENST00000370848 CCL18P55774 89 aa10.44□□□□□ -0.74
SS18L1-202ENST00000370848 TNP2Q05952 138 aa10.44□□□□□ -0.74
SS18L1-202ENST00000370848 DNLZQ5SXM8 178 aa10.44□□□□□ -0.74
SS18L1-202ENST00000370848 C6orf223Q8N319 242 aa10.44□□□□□ -0.74
SS18L1-202ENST00000370848 IL36BQ9NZH7 164 aa10.44□□□□□ -0.74
SS18L1-202ENST00000370848 ICOSQ9Y6W8 199 aa10.44□□□□□ -0.74
SS18L1-202ENST00000370848 MGST1P10620 155 aaKnown RBP10.43□□□□□ -0.74
SS18L1-202ENST00000370848 GYPEP15421 78 aa10.43□□□□□ -0.74
SS18L1-202ENST00000370848 GATA1P15976 413 aaPredicted RBP10.43□□□□□ -0.74
SS18L1-202ENST00000370848 DMRTA1Q5VZB9 504 aa10.43□□□□□ -0.74
SS18L1-202ENST00000370848 PTH2Q96A98 100 aa10.43□□□□□ -0.74
SS18L1-202ENST00000370848 UPK3BQ9BT76 320 aa10.43□□□□□ -0.74
SS18L1-202ENST00000370848 KRTAP4-5Q9BYR2 181 aa10.43□□□□□ -0.74
SS18L1-202ENST00000370848 RBFOX3A6NFN3 312 aa10.42□□□□□ -0.74
SS18L1-202ENST00000370848 K7EQD1 137 aa10.42□□□□□ -0.74
SS18L1-202ENST00000370848 BTF3P20290 206 aaKnown RBP10.42□□□□□ -0.74
SS18L1-202ENST00000370848 GNG4P50150 75 aa10.42□□□□□ -0.74
SS18L1-202ENST00000370848 SLAQ13239 276 aa10.42□□□□□ -0.74
SS18L1-202ENST00000370848 SAMD10Q9BYL1 202 aa10.42□□□□□ -0.74
SS18L1-202ENST00000370848 PARLQ9H300 379 aa10.42□□□□□ -0.74
SS18L1-202ENST00000370848 SCRT2Q9NQ03 307 aa10.42□□□□□ -0.74
SS18L1-202ENST00000370848 TAGLN2P37802 199 aaKnown RBP10.41□□□□□ -0.74
SS18L1-202ENST00000370848 TOR2AQ5JU69 321 aa10.41□□□□□ -0.74
SS18L1-202ENST00000370848 Q6ZSN1 163 aa10.41□□□□□ -0.74
SS18L1-202ENST00000370848 MUC21A0A0G2JKD1 596 aa10.4□□□□□ -0.74
SS18L1-202ENST00000370848 MUC21A0A140T8X8 626 aa10.4□□□□□ -0.74
SS18L1-202ENST00000370848 M0R381 172 aa10.4□□□□□ -0.74
SS18L1-202ENST00000370848 MRPL23Q16540 153 aaKnown RBP10.4□□□□□ -0.74
SS18L1-202ENST00000370848 UFSP1Q6NVU6 142 aa10.4□□□□□ -0.74
SS18L1-202ENST00000370848 SLC25A29Q8N8R3 303 aa10.4□□□□□ -0.74
SS18L1-202ENST00000370848 MRPS16Q9Y3D3 137 aaKnown RBP10.4□□□□□ -0.74
SS18L1-202ENST00000370848 PHLDA3Q9Y5J5 127 aa10.4□□□□□ -0.74
SS18L1-202ENST00000370848 A0A1W2PPQ1 181 aa10.39□□□□□ -0.75
SS18L1-202ENST00000370848 C19orf71A6NCJ1 209 aa10.39□□□□□ -0.75
SS18L1-202ENST00000370848 GZMBP10144 247 aa10.39□□□□□ -0.75
SS18L1-202ENST00000370848 SRIP30626 198 aa10.39□□□□□ -0.75
SS18L1-202ENST00000370848 OR10AG1Q8NH19 301 aa10.39□□□□□ -0.75
SS18L1-202ENST00000370848 A0A087WWL8 130 aa10.38□□□□□ -0.75
SS18L1-202ENST00000370848 A8MWV9 139 aa10.38□□□□□ -0.75
SS18L1-202ENST00000370848 K7EN84 100 aa10.38□□□□□ -0.75
SS18L1-202ENST00000370848 CXCL1P09341 107 aa10.38□□□□□ -0.75
SS18L1-202ENST00000370848 CEBPGP53567 150 aa10.38□□□□□ -0.75
SS18L1-202ENST00000370848 TTC32Q5I0X7 151 aa10.38□□□□□ -0.75
SS18L1-202ENST00000370848 TEX261Q6UWH6 196 aa10.38□□□□□ -0.75
SS18L1-202ENST00000370848 LYPD5Q6UWN5 251 aa10.38□□□□□ -0.75
SS18L1-202ENST00000370848 NEGR1Q7Z3B1 354 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms