RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 ASH1LQ9NR48 2969 aaKnown RBP0.64□□□□□ -2.31
RNU6-28P-201ENST00000362378 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
RNU6-28P-201ENST00000362378 TRBV20-1A0A075B6N2 111 aa0.64□□□□□ -2.31
RNU6-28P-201ENST00000362378 IGLC6P0CF74 106 aa0.64□□□□□ -2.31
RNU6-28P-201ENST00000362378 MPC1LP0DKB6 136 aa0.64□□□□□ -2.31
RNU6-28P-201ENST00000362378 RPL37P61927 97 aaKnown RBP0.64□□□□□ -2.31
RNU6-28P-201ENST00000362378 NCS1P62166 190 aa0.64□□□□□ -2.31
RNU6-28P-201ENST00000362378 KLKP1Q107X0 134 aa0.64□□□□□ -2.31
RNU6-28P-201ENST00000362378 DYNLRB2Q8TF09 96 aa0.64□□□□□ -2.31
RNU6-28P-201ENST00000362378 RREB1Q92766 1687 aa0.64□□□□□ -2.31
RNU6-28P-201ENST00000362378 BCORL1Q5H9F3 1711 aa0.64□□□□□ -2.31
RNU6-28P-201ENST00000362378 PRG4Q92954 1404 aaPredicted RBP0.64□□□□□ -2.31
RNU6-28P-201ENST00000362378 ZNF462Q96JM2 2506 aa0.63□□□□□ -2.31
RNU6-28P-201ENST00000362378 TEX49A0A1B0GTD5 131 aa0.63□□□□□ -2.31
RNU6-28P-201ENST00000362378 J3QLW9 94 aa0.63□□□□□ -2.31
RNU6-28P-201ENST00000362378 FXYD1O00168 92 aa0.63□□□□□ -2.31
RNU6-28P-201ENST00000362378 PLXNA2O75051 1894 aa0.63□□□□□ -2.31
RNU6-28P-201ENST00000362378 CASZ1Q86V15 1759 aa0.62□□□□□ -2.31
RNU6-28P-201ENST00000362378 AFDNP55196 1824 aaKnown RBP0.62□□□□□ -2.31
RNU6-28P-201ENST00000362378 NCR2O95944 276 aa0.62□□□□□ -2.31
RNU6-28P-201ENST00000362378 NDUFA11Q86Y39 141 aa0.62□□□□□ -2.31
RNU6-28P-201ENST00000362378 SMIM3Q9BZL3 60 aa0.62□□□□□ -2.31
RNU6-28P-201ENST00000362378 PTPRMP28827 1452 aa0.61□□□□□ -2.31
RNU6-28P-201ENST00000362378 ERCC6Q03468 1493 aa0.61□□□□□ -2.31
RNU6-28P-201ENST00000362378 FAM236AA0A1B0GUQ0 79 aa0.61□□□□□ -2.31
RNU6-28P-201ENST00000362378 FAM236BA0A1B0GV22 79 aa0.61□□□□□ -2.31
RNU6-28P-201ENST00000362378 SMIM21Q3B7S5 101 aa0.61□□□□□ -2.31
RNU6-28P-201ENST00000362378 FAM103A1Q9BTL3 118 aaKnown RBP0.61□□□□□ -2.31
RNU6-28P-201ENST00000362378 SAR1AQ9NR31 198 aa0.61□□□□□ -2.31
RNU6-28P-201ENST00000362378 TMEM14BQ9NUH8 114 aa0.61□□□□□ -2.31
RNU6-28P-201ENST00000362378 COPZ2Q9P299 210 aa0.61□□□□□ -2.31
RNU6-28P-201ENST00000362378 FRAS1Q86XX4 4008 aa0.61□□□□□ -2.31
RNU6-28P-201ENST00000362378 CCDC179H3BU77 68 aa0.6□□□□□ -2.31
RNU6-28P-201ENST00000362378 M0R2Z0 102 aa0.6□□□□□ -2.31
RNU6-28P-201ENST00000362378 APOC1P02654 83 aa0.6□□□□□ -2.31
RNU6-28P-201ENST00000362378 LINC00694P0DN24 101 aa0.6□□□□□ -2.31
RNU6-28P-201ENST00000362378 SLC25A6P12236 298 aa0.6□□□□□ -2.31
RNU6-28P-201ENST00000362378 SMCO1Q147U7 214 aa0.6□□□□□ -2.31
RNU6-28P-201ENST00000362378 CTAGE3PQ8IX95 158 aa0.6□□□□□ -2.31
RNU6-28P-201ENST00000362378 A0A096LNT2 108 aa0.59□□□□□ -2.31
RNU6-28P-201ENST00000362378 J3QR89 54 aa0.59□□□□□ -2.31
RNU6-28P-201ENST00000362378 TFF1P04155 84 aa0.59□□□□□ -2.31
RNU6-28P-201ENST00000362378 SPINK7P58062 85 aa0.59□□□□□ -2.31
RNU6-28P-201ENST00000362378 OR2T2Q6IF00 324 aa0.59□□□□□ -2.31
RNU6-28P-201ENST00000362378 ERG28Q9UKR5 140 aa0.59□□□□□ -2.31
RNU6-28P-201ENST00000362378 ZNF142P52746 1687 aaPredicted RBP0.59□□□□□ -2.32
RNU6-28P-201ENST00000362378 CDK5RAP2Q96SN8 1893 aa0.58□□□□□ -2.32
RNU6-28P-201ENST00000362378 ADGRB1O14514 1584 aa0.58□□□□□ -2.32
RNU6-28P-201ENST00000362378 LOC285556D6RIA3 1793 aa0.58□□□□□ -2.32
RNU6-28P-201ENST00000362378 TRAV12-2A0A075B6T6 113 aa0.58□□□□□ -2.32
RNU6-28P-201ENST00000362378 PYYP10082 97 aa0.58□□□□□ -2.32
RNU6-28P-201ENST00000362378 PLAC8Q9NZF1 115 aa0.58□□□□□ -2.32
RNU6-28P-201ENST00000362378 SPAG17Q6Q759 2223 aa0.58□□□□□ -2.32
RNU6-28P-201ENST00000362378 KNTC1P50748 2209 aa0.57□□□□□ -2.32
RNU6-28P-201ENST00000362378 LINC01545Q5VT33 79 aa0.57□□□□□ -2.32
RNU6-28P-201ENST00000362378 VSTM2AQ8TAG5 236 aa0.57□□□□□ -2.32
RNU6-28P-201ENST00000362378 PPP1R1CQ8WVI7 109 aa0.57□□□□□ -2.32
RNU6-28P-201ENST00000362378 IFI27L1Q96BM0 104 aa0.57□□□□□ -2.32
RNU6-28P-201ENST00000362378 TMEM141Q96I45 108 aa0.57□□□□□ -2.32
RNU6-28P-201ENST00000362378 COA4Q9NYJ1 87 aa0.57□□□□□ -2.32
RNU6-28P-201ENST00000362378 KCPQ6ZWJ8 1503 aa0.57□□□□□ -2.32
RNU6-28P-201ENST00000362378 TCRBV3S1A0A5B6 114 aa0.56□□□□□ -2.32
RNU6-28P-201ENST00000362378 M0R129 80 aa0.56□□□□□ -2.32
RNU6-28P-201ENST00000362378 COX4I1P13073 169 aa0.56□□□□□ -2.32
RNU6-28P-201ENST00000362378 MIC13Q5XKP0 118 aa0.56□□□□□ -2.32
RNU6-28P-201ENST00000362378 TSTD1Q8NFU3 115 aa0.56□□□□□ -2.32
RNU6-28P-201ENST00000362378 BET1LQ9NYM9 111 aa0.56□□□□□ -2.32
RNU6-28P-201ENST00000362378 ESPL1Q14674 2120 aa0.56□□□□□ -2.32
RNU6-28P-201ENST00000362378 TENM3Q9P273 2699 aa0.55□□□□□ -2.32
RNU6-28P-201ENST00000362378 MAP2P11137 1827 aaKnown RBP0.55□□□□□ -2.32
RNU6-28P-201ENST00000362378 VIRMAQ69YN4 1812 aaKnown RBP0.55□□□□□ -2.32
RNU6-28P-201ENST00000362378 ZNF670-ZNF695F2Z2N8 137 aa0.55□□□□□ -2.32
RNU6-28P-201ENST00000362378 NPFFO15130 113 aa0.55□□□□□ -2.32
RNU6-28P-201ENST00000362378 PITX3O75364 302 aa0.55□□□□□ -2.32
RNU6-28P-201ENST00000362378 PRH1P02810 166 aa0.55□□□□□ -2.32
RNU6-28P-201ENST00000362378 ELOF1P60002 83 aaKnown RBP0.55□□□□□ -2.32
RNU6-28P-201ENST00000362378 EMX2Q04743 252 aa0.55□□□□□ -2.32
RNU6-28P-201ENST00000362378 TSKUQ8WUA8 353 aa0.55□□□□□ -2.32
RNU6-28P-201ENST00000362378 DSCR8Q96T75 97 aa0.55□□□□□ -2.32
RNU6-28P-201ENST00000362378 NDUFA12Q9UI09 145 aa0.55□□□□□ -2.32
RNU6-28P-201ENST00000362378 K7ERU9 68 aa0.54□□□□□ -2.32
RNU6-28P-201ENST00000362378 RPS25P62851 125 aaKnown RBP0.54□□□□□ -2.32
RNU6-28P-201ENST00000362378 CYP2G1PQ6ZSU1 146 aa0.54□□□□□ -2.32
RNU6-28P-201ENST00000362378 Q6ZUT4 128 aa0.54□□□□□ -2.32
RNU6-28P-201ENST00000362378 PFDN5Q99471 154 aa0.54□□□□□ -2.32
RNU6-28P-201ENST00000362378 KIF13AQ9H1H9 1805 aa0.53□□□□□ -2.32
RNU6-28P-201ENST00000362378 MCRIP1C9JLW8 97 aa0.53□□□□□ -2.32
RNU6-28P-201ENST00000362378 NPC2P61916 151 aa0.53□□□□□ -2.32
RNU6-28P-201ENST00000362378 SPANXN1Q5VSR9 72 aa0.53□□□□□ -2.32
RNU6-28P-201ENST00000362378 SCIMPQ6UWF3 145 aa0.53□□□□□ -2.32
RNU6-28P-201ENST00000362378 PAIP2BQ9ULR5 123 aaKnown RBP0.53□□□□□ -2.32
RNU6-28P-201ENST00000362378 TMEM2Q9UHN6 1383 aa0.53□□□□□ -2.32
RNU6-28P-201ENST00000362378 MYH13Q9UKX3 1938 aa0.52□□□□□ -2.33
RNU6-28P-201ENST00000362378 TRAV12-3A0A0B4J271 114 aa0.52□□□□□ -2.33
RNU6-28P-201ENST00000362378 PIRTP0C851 137 aa0.52□□□□□ -2.33
RNU6-28P-201ENST00000362378 CCL3L1P16619 93 aa0.52□□□□□ -2.33
RNU6-28P-201ENST00000362378 S100A12P80511 92 aa0.52□□□□□ -2.33
RNU6-28P-201ENST00000362378 SPCS2Q15005 226 aa0.52□□□□□ -2.33
RNU6-28P-201ENST00000362378 SMR3AQ99954 134 aa0.52□□□□□ -2.33
RNU6-28P-201ENST00000362378 TPT1P8Q9HAU6 139 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms