RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 IGLV2-8P01709 118 aa4.81□□□□□ -1.64
VPS13B-203ENST00000358544 ATP5EP2Q5VTU8 51 aa4.81□□□□□ -1.64
VPS13B-203ENST00000358544 PIFOQ8TCI5 191 aa4.81□□□□□ -1.64
VPS13B-203ENST00000358544 IGHV3OR16-10A0A075B7F0 116 aa4.81□□□□□ -1.64
VPS13B-203ENST00000358544 CHCHD5Q9BSY4 110 aa4.81□□□□□ -1.64
VPS13B-203ENST00000358544 LINC00643Q86TS7 51 aa4.81□□□□□ -1.64
VPS13B-203ENST00000358544 Q8TCH9 128 aa4.81□□□□□ -1.64
VPS13B-203ENST00000358544 F5H768 121 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 I3L3M4 83 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 K7EM74 188 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 P0C879 139 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 UBR5O95071 2799 aaPredicted RBP4.8□□□□□ -1.64
VPS13B-203ENST00000358544 GATA4P43694 442 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 WDR86Q86TI4 376 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 V9GYY9 64 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 KIAA1671Q9BY89 1806 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 ORMDL1Q9P0S3 153 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 TEX49A0A1B0GTD5 131 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 hADV29S1A0JD25 119 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 F8WEM9 126 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 ATP5EP56381 51 aaPredicted RBP4.8□□□□□ -1.64
VPS13B-203ENST00000358544 CFHR1Q03591 330 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 CLEC2BQ92478 149 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 RSPO1Q2MKA7 263 aaPredicted RBP4.8□□□□□ -1.64
VPS13B-203ENST00000358544 LINC00477Q96M19 166 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 MRPL55Q7Z7F7 128 aaKnown RBP4.8□□□□□ -1.64
VPS13B-203ENST00000358544 SMIM9A6NGZ8 99 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 PATE2Q6UY27 113 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 ITLN2Q8WWU7 325 aaPredicted RBP4.8□□□□□ -1.64
VPS13B-203ENST00000358544 TRANK1O15050 2925 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 LOXL1Q08397 574 aaPredicted RBP4.8□□□□□ -1.64
VPS13B-203ENST00000358544 PATE3B3GLJ2 98 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 XGP55808 180 aa4.8□□□□□ -1.64
VPS13B-203ENST00000358544 IGFBPL1Q8WX77 278 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 RAI1Q7Z5J4 1906 aaPredicted RBP4.79□□□□□ -1.64
VPS13B-203ENST00000358544 C17orf100A8MU93 164 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 F6UB75 175 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 DYNAPQ8N1N2 210 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 TRGV2A0A075B6R0 118 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 RHODO00212 210 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 MBD6Q96DN6 1003 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 FAM167A-AS1Q96KT0 104 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 IGHV1-18A0A0C4DH31 117 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 UQCRQO14949 82 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 DKK1O94907 266 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 MUSTN1Q8IVN3 82 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 C19orf71A6NCJ1 209 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 C2orf91Q6ZV80 131 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 MRPL53Q96EL3 112 aaKnown RBP4.79□□□□□ -1.64
VPS13B-203ENST00000358544 ODF3L1Q8IXM7 274 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 LINC01560Q8TB33 94 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 PDE6GP18545 87 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 CPAMD8Q8IZJ3 1885 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 CMC4P56277 68 aaPredicted RBP4.79□□□□□ -1.64
VPS13B-203ENST00000358544 RPL36AP83881 106 aaKnown RBP4.79□□□□□ -1.64
VPS13B-203ENST00000358544 RPL36ALQ969Q0 106 aaKnown RBP4.79□□□□□ -1.64
VPS13B-203ENST00000358544 EPOPA6NHQ4 379 aa4.79□□□□□ -1.64
VPS13B-203ENST00000358544 ZNF71Q9NQZ8 489 aaPredicted RBP4.79□□□□□ -1.64
VPS13B-203ENST00000358544 CENPFP49454 3210 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 IGHG2P01859 326 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 ZNF134P52741 427 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 Q9H8V8 135 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 CCL21O00585 134 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 FAM110DQ8TAY7 271 aaPredicted RBP4.78□□□□□ -1.64
VPS13B-203ENST00000358544 SPRR3Q9UBC9 169 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 TRBV7-1A0A0A6YYK4 115 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 TRBV6-1A0A0K0K1D8 114 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 FAM236DA0A1B0GTK5 79 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 FAM236CP0DP71 79 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 NDPQ00604 133 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 Q6ZS92 163 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 ZNF503Q96F45 646 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 CSDC2Q9Y534 153 aaKnown RBP4.78□□□□□ -1.64
VPS13B-203ENST00000358544 C1orf210Q8IVY1 113 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 BRK1Q8WUW1 75 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 LGALS9O00182 355 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 CFHR4Q92496 578 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 TMEM219Q86XT9 240 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 Q8N976 141 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 ZNF295-AS1Q8N0V1 137 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 PRB1P04280 392 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 MSRB1Q9NZV6 116 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 TMEM178BH3BS89 294 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 DEFB124Q8NES8 71 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 COL11A2P13942 1736 aaPredicted RBP4.78□□□□□ -1.64
VPS13B-203ENST00000358544 CHD9Q3L8U1 2897 aa4.78□□□□□ -1.64
VPS13B-203ENST00000358544 FAM223BA6NKX1 122 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 INS-IGF2F8WCM5 200 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 INSP01308 110 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 THBDP07204 575 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 FAM223AQ8IWN6 122 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 TRGV4A0A0C4DH28 118 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 IGLC6P0CF74 106 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 VSIG2Q96IQ7 327 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 FGF23Q9GZV9 251 aaPredicted RBP4.77□□□□□ -1.65
VPS13B-203ENST00000358544 TPSG1Q9NRR2 321 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 IGHG3P01860 377 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 NBL1P41271 181 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 C10orf105Q8TEF2 133 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 H0YGX0 51 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms