RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ACTR3CQ9C0K3 210 aaPredicted RBP10.51□□□□□ -0.73
DDX55-202ENST00000354291 TAAR5O14804 337 aa10.5□□□□□ -0.73
DDX55-202ENST00000354291 Q5BKY6 102 aa10.5□□□□□ -0.73
DDX55-202ENST00000354291 SH2D6Q7Z4S9 175 aa10.5□□□□□ -0.73
DDX55-202ENST00000354291 EPDR1Q9UM22 224 aa10.5□□□□□ -0.73
DDX55-202ENST00000354291 BORCS7-ASMTA0A0B4J1R7 106 aa10.49□□□□□ -0.73
DDX55-202ENST00000354291 IGHV3-38A0A0C4DH36 116 aa10.49□□□□□ -0.73
DDX55-202ENST00000354291 FBLL1A6NHQ2 334 aaKnown RBP10.49□□□□□ -0.73
DDX55-202ENST00000354291 IBA57-AS1B1ANH7 110 aa10.49□□□□□ -0.73
DDX55-202ENST00000354291 CIDEAO60543 219 aa10.49□□□□□ -0.73
DDX55-202ENST00000354291 SH3BGRL3Q9H299 93 aa10.49□□□□□ -0.73
DDX55-202ENST00000354291 PSG8Q9UQ74 426 aa10.49□□□□□ -0.73
DDX55-202ENST00000354291 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.48□□□□□ -0.73
DDX55-202ENST00000354291 RS1O15537 224 aa10.48□□□□□ -0.73
DDX55-202ENST00000354291 PFN1P07737 140 aaKnown RBP10.48□□□□□ -0.73
DDX55-202ENST00000354291 FLI1Q01543 452 aaPredicted RBP10.48□□□□□ -0.73
DDX55-202ENST00000354291 WFDC2Q14508 124 aa10.48□□□□□ -0.73
DDX55-202ENST00000354291 ZNF876PQ49A33 203 aa10.48□□□□□ -0.73
DDX55-202ENST00000354291 ZFP69Q49AA0 526 aa10.48□□□□□ -0.73
DDX55-202ENST00000354291 SMUG1Q53HV7 270 aa10.48□□□□□ -0.73
DDX55-202ENST00000354291 SAPCD1Q5SSQ6 148 aa10.48□□□□□ -0.73
DDX55-202ENST00000354291 CYB561D1Q8N8Q1 229 aa10.48□□□□□ -0.73
DDX55-202ENST00000354291 FXYD6-FXYD2A0A087WZ82 144 aa10.47□□□□□ -0.73
DDX55-202ENST00000354291 A0A1W2PRE2 83 aa10.47□□□□□ -0.73
DDX55-202ENST00000354291 GGTLC3B5MD39 225 aa10.47□□□□□ -0.73
DDX55-202ENST00000354291 LECT2O14960 151 aa10.47□□□□□ -0.73
DDX55-202ENST00000354291 GCGP01275 180 aa10.47□□□□□ -0.73
DDX55-202ENST00000354291 IGLV2-11P01706 119 aa10.47□□□□□ -0.73
DDX55-202ENST00000354291 GATA1P15976 413 aaPredicted RBP10.47□□□□□ -0.73
DDX55-202ENST00000354291 ZNF80P51504 273 aaPredicted RBP10.47□□□□□ -0.73
DDX55-202ENST00000354291 RPL7L1Q6DKI1 246 aaKnown RBP10.47□□□□□ -0.73
DDX55-202ENST00000354291 PRNTQ86SH4 94 aa10.47□□□□□ -0.73
DDX55-202ENST00000354291 TMEM75Q8N9X5 138 aa10.47□□□□□ -0.73
DDX55-202ENST00000354291 CHAC1Q9BUX1 264 aa10.47□□□□□ -0.73
DDX55-202ENST00000354291 RNF222A6NCQ9 220 aa10.46□□□□□ -0.73
DDX55-202ENST00000354291 ASIPP42127 132 aa10.46□□□□□ -0.73
DDX55-202ENST00000354291 OR2T35Q8NGX2 323 aa10.46□□□□□ -0.73
DDX55-202ENST00000354291 C11orf21Q9P2W6 132 aa10.46□□□□□ -0.73
DDX55-202ENST00000354291 IGLV2-8P01709 118 aa10.45□□□□□ -0.74
DDX55-202ENST00000354291 IGHV3-30P01768 117 aa10.45□□□□□ -0.74
DDX55-202ENST00000354291 IGHV3-33P01772 117 aa10.45□□□□□ -0.74
DDX55-202ENST00000354291 IGHV3-30-3P0DP02 117 aa10.45□□□□□ -0.74
DDX55-202ENST00000354291 IGHV3-30-5P0DP03 117 aa10.45□□□□□ -0.74
DDX55-202ENST00000354291 TIRAPP58753 221 aa10.45□□□□□ -0.74
DDX55-202ENST00000354291 LINC01556Q5JQF7 62 aa10.45□□□□□ -0.74
DDX55-202ENST00000354291 NHLRC2Q8NBF2 726 aa10.45□□□□□ -0.74
DDX55-202ENST00000354291 CIRBP-AS1Q8TBR5 109 aa10.45□□□□□ -0.74
DDX55-202ENST00000354291 PTH2Q96A98 100 aa10.45□□□□□ -0.74
DDX55-202ENST00000354291 NKX6-2Q9C056 277 aaPredicted RBP10.45□□□□□ -0.74
DDX55-202ENST00000354291 BOLA1Q9Y3E2 137 aa10.45□□□□□ -0.74
DDX55-202ENST00000354291 TNXBP22105 4242 aa10.44□□□□□ -0.74
DDX55-202ENST00000354291 LOC100131303A0A0U1RQF7 123 aa10.44□□□□□ -0.74
DDX55-202ENST00000354291 CTXND1A0A1B0GTU2 59 aa10.44□□□□□ -0.74
DDX55-202ENST00000354291 IFNA7P01567 189 aa10.44□□□□□ -0.74
DDX55-202ENST00000354291 PPT1P50897 306 aa10.44□□□□□ -0.74
DDX55-202ENST00000354291 CFAP126Q5VTH2 177 aa10.44□□□□□ -0.74
DDX55-202ENST00000354291 C9orf85Q96MD7 179 aa10.44□□□□□ -0.74
DDX55-202ENST00000354291 PRADC1Q9BSG0 188 aa10.44□□□□□ -0.74
DDX55-202ENST00000354291 TM2D2Q9BX73 214 aa10.44□□□□□ -0.74
DDX55-202ENST00000354291 TRBV6-4A0A1B0GX49 114 aa10.43□□□□□ -0.74
DDX55-202ENST00000354291 ZNF726P1Q15940 193 aa10.43□□□□□ -0.74
DDX55-202ENST00000354291 AKR1C8PQ5T2L2 129 aa10.43□□□□□ -0.74
DDX55-202ENST00000354291 SLC25A29Q8N8R3 303 aa10.43□□□□□ -0.74
DDX55-202ENST00000354291 RBFOX3A6NFN3 312 aa10.42□□□□□ -0.74
DDX55-202ENST00000354291 PGPEP1LA6NFU8 196 aa10.42□□□□□ -0.74
DDX55-202ENST00000354291 FABP5P3A8MUU1 101 aa10.42□□□□□ -0.74
DDX55-202ENST00000354291 MT1HL1P0DM35 61 aa10.42□□□□□ -0.74
DDX55-202ENST00000354291 RNASE3P12724 160 aaKnown RBP10.42□□□□□ -0.74
DDX55-202ENST00000354291 HNRNPA3P51991 378 aaKnown RBP10.42□□□□□ -0.74
DDX55-202ENST00000354291 RPL37AP61513 92 aaKnown RBP10.42□□□□□ -0.74
DDX55-202ENST00000354291 RHOHQ15669 191 aa10.42□□□□□ -0.74
DDX55-202ENST00000354291 ZNF506Q5JVG8 444 aa10.42□□□□□ -0.74
DDX55-202ENST00000354291 DPPA3Q6W0C5 159 aa10.42□□□□□ -0.74
DDX55-202ENST00000354291 LINC00479Q96M42 142 aa10.42□□□□□ -0.74
DDX55-202ENST00000354291 TRAV8-6A0A0B4J262 113 aa10.41□□□□□ -0.74
DDX55-202ENST00000354291 TRAV34A0A0B4J273 112 aa10.41□□□□□ -0.74
DDX55-202ENST00000354291 MGST1P10620 155 aaKnown RBP10.41□□□□□ -0.74
DDX55-202ENST00000354291 S100A4P26447 101 aaKnown RBP10.41□□□□□ -0.74
DDX55-202ENST00000354291 UBE2G2P60604 165 aa10.41□□□□□ -0.74
DDX55-202ENST00000354291 RGS21Q2M5E4 152 aa10.41□□□□□ -0.74
DDX55-202ENST00000354291 OR10J3Q5JRS4 329 aa10.41□□□□□ -0.74
DDX55-202ENST00000354291 HIST1H2BAQ96A08 127 aa10.41□□□□□ -0.74
DDX55-202ENST00000354291 DAZAP1Q96EP5 407 aaKnown RBP10.41□□□□□ -0.74
DDX55-202ENST00000354291 ARL2-SNX15V9GYD0 113 aa10.41□□□□□ -0.74
DDX55-202ENST00000354291 IGHV3-73A0A0B4J1V6 119 aa10.4□□□□□ -0.74
DDX55-202ENST00000354291 PEX7O00628 323 aa10.4□□□□□ -0.74
DDX55-202ENST00000354291 PIK3CD-AS1Q5SR53 167 aa10.4□□□□□ -0.74
DDX55-202ENST00000354291 IGKV3D-20A0A0C4DH25 116 aa10.39□□□□□ -0.75
DDX55-202ENST00000354291 FAM74A7A6NL05 159 aa10.39□□□□□ -0.75
DDX55-202ENST00000354291 A8MWV9 139 aa10.39□□□□□ -0.75
DDX55-202ENST00000354291 FGF8P55075 233 aaPredicted RBP10.39□□□□□ -0.75
DDX55-202ENST00000354291 ZFP2Q6ZN57 461 aa10.39□□□□□ -0.75
DDX55-202ENST00000354291 BAALCQ8WXS3 180 aa10.39□□□□□ -0.75
DDX55-202ENST00000354291 ZFP30Q9Y2G7 519 aa10.39□□□□□ -0.75
DDX55-202ENST00000354291 ARPC5O15511 151 aa10.38□□□□□ -0.75
DDX55-202ENST00000354291 ATP6V0E2Q8NHE4 81 aa10.38□□□□□ -0.75
DDX55-202ENST00000354291 GTSF1LQ9H1H1 148 aa10.38□□□□□ -0.75
DDX55-202ENST00000354291 IL36BQ9NZH7 164 aa10.38□□□□□ -0.75
DDX55-202ENST00000354291 MAP1LC3B2A6NCE7 125 aa10.37□□□□□ -0.75
DDX55-202ENST00000354291 B4DEV8 164 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms