RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 TEX48A0A1B0GUV7 120 aa18.49■□□□□ 0.55
CPNE1-202ENST00000352393 GNRH2O43555 120 aa18.47■□□□□ 0.55
CPNE1-202ENST00000352393 PPP1R17O96001 155 aa18.47■□□□□ 0.55
CPNE1-202ENST00000352393 IGHV3-11P01762 117 aa18.47■□□□□ 0.55
CPNE1-202ENST00000352393 IGHG2P01859 326 aa18.47■□□□□ 0.55
CPNE1-202ENST00000352393 LGALS1P09382 135 aaKnown RBP18.46■□□□□ 0.55
CPNE1-202ENST00000352393 RPL24P83731 157 aaKnown RBP18.46■□□□□ 0.55
CPNE1-202ENST00000352393 C19orf84I3L1E1 186 aa18.46■□□□□ 0.55
CPNE1-202ENST00000352393 RRN3P1Q2M238 152 aa18.46■□□□□ 0.55
CPNE1-202ENST00000352393 PRSS29PA6NIE9 313 aa18.45■□□□□ 0.54
CPNE1-202ENST00000352393 RPL11P62913 178 aaKnown RBP18.45■□□□□ 0.54
CPNE1-202ENST00000352393 KIF25-AS1Q9Y6Z4 181 aa18.45■□□□□ 0.54
CPNE1-202ENST00000352393 MUC4Q99102 2169 aa18.45■□□□□ 0.54
CPNE1-202ENST00000352393 PRADC1Q9BSG0 188 aa18.44■□□□□ 0.54
CPNE1-202ENST00000352393 AKAP6Q13023 2319 aa18.44■□□□□ 0.54
CPNE1-202ENST00000352393 F8W1H4 67 aa18.44■□□□□ 0.54
CPNE1-202ENST00000352393 LINC00315P59091 139 aa18.44■□□□□ 0.54
CPNE1-202ENST00000352393 LY6EQ16553 131 aa18.44■□□□□ 0.54
CPNE1-202ENST00000352393 RHPN1-AS1Q9BWJ2 59 aa18.44■□□□□ 0.54
CPNE1-202ENST00000352393 RPL32P62910 135 aaKnown RBP18.43■□□□□ 0.54
CPNE1-202ENST00000352393 A6NDX4 124 aa18.43■□□□□ 0.54
CPNE1-202ENST00000352393 SPANXB1Q9NS25 103 aaPredicted RBP18.43■□□□□ 0.54
CPNE1-202ENST00000352393 KLLNB2CW77 178 aa18.42■□□□□ 0.54
CPNE1-202ENST00000352393 IGHV4-38-2P0DP08 117 aa18.42■□□□□ 0.54
CPNE1-202ENST00000352393 PF4V1P10720 104 aa18.42■□□□□ 0.54
CPNE1-202ENST00000352393 IGKV3-7A0A075B6H7 116 aa18.41■□□□□ 0.54
CPNE1-202ENST00000352393 IGHV4OR15-8A0A075B7B6 117 aa18.41■□□□□ 0.54
CPNE1-202ENST00000352393 A0A087WW49 117 aa18.41■□□□□ 0.54
CPNE1-202ENST00000352393 IGHV4-61A0A0C4DH41 118 aa18.41■□□□□ 0.54
CPNE1-202ENST00000352393 DUSP14O95147 198 aaKnown RBP18.41■□□□□ 0.54
CPNE1-202ENST00000352393 COX6B1P14854 86 aa18.41■□□□□ 0.54
CPNE1-202ENST00000352393 WFDC2Q14508 124 aa18.41■□□□□ 0.54
CPNE1-202ENST00000352393 CYSLTR1Q9Y271 337 aa18.41■□□□□ 0.54
CPNE1-202ENST00000352393 H3BUX3 64 aa18.4■□□□□ 0.54
CPNE1-202ENST00000352393 DAZ1Q9NQZ3 744 aaKnown RBP18.4■□□□□ 0.54
CPNE1-202ENST00000352393 H3BMG7 143 aa18.4■□□□□ 0.54
CPNE1-202ENST00000352393 CRYGDP07320 174 aa18.4■□□□□ 0.54
CPNE1-202ENST00000352393 IGLV1-40P01703 118 aa18.39■□□□□ 0.53
CPNE1-202ENST00000352393 LY6DQ14210 128 aa18.39■□□□□ 0.53
CPNE1-202ENST00000352393 MORN3Q6PF18 240 aaPredicted RBP18.39■□□□□ 0.53
CPNE1-202ENST00000352393 ZNF815PA8K554 130 aa18.38■□□□□ 0.53
CPNE1-202ENST00000352393 TSHBP01222 138 aa18.38■□□□□ 0.53
CPNE1-202ENST00000352393 LCNL1Q6ZST4 164 aa18.38■□□□□ 0.53
CPNE1-202ENST00000352393 PIMREGQ9BSJ6 248 aa18.38■□□□□ 0.53
CPNE1-202ENST00000352393 ZFHX3Q15911 3703 aa18.37■□□□□ 0.53
CPNE1-202ENST00000352393 IGLV4-69A0A075B6H9 119 aa18.37■□□□□ 0.53
CPNE1-202ENST00000352393 TMEM238C9JI98 176 aa18.37■□□□□ 0.53
CPNE1-202ENST00000352393 BLCAPP62952 87 aa18.37■□□□□ 0.53
CPNE1-202ENST00000352393 AMTNQ6UX39 209 aa18.37■□□□□ 0.53
CPNE1-202ENST00000352393 Q6ZS46 218 aa18.37■□□□□ 0.53
CPNE1-202ENST00000352393 PRO0461Q9UI25 63 aa18.37■□□□□ 0.53
CPNE1-202ENST00000352393 SPTBN4Q9H254 2564 aa18.37■□□□□ 0.53
CPNE1-202ENST00000352393 POLR2KP53803 58 aaKnown RBP18.37■□□□□ 0.53
CPNE1-202ENST00000352393 PRORYQ9H606 182 aa18.37■□□□□ 0.53
CPNE1-202ENST00000352393 TP53TG1Q9Y2A0 90 aa18.37■□□□□ 0.53
CPNE1-202ENST00000352393 IGIPA6NJ69 53 aa18.36■□□□□ 0.53
CPNE1-202ENST00000352393 SUMO4Q6EEV6 95 aa18.36■□□□□ 0.53
CPNE1-202ENST00000352393 PLEKHB2Q96CS7 222 aa18.36■□□□□ 0.53
CPNE1-202ENST00000352393 LINC01549A6NIU2 74 aa18.35■□□□□ 0.53
CPNE1-202ENST00000352393 CFHR3Q02985 330 aa18.35■□□□□ 0.53
CPNE1-202ENST00000352393 SCGB2A2Q13296 93 aa18.35■□□□□ 0.53
CPNE1-202ENST00000352393 ZFP2Q6ZN57 461 aa18.35■□□□□ 0.53
CPNE1-202ENST00000352393 C11orf86A6NJI1 115 aa18.35■□□□□ 0.53
CPNE1-202ENST00000352393 EDN2P20800 178 aa18.35■□□□□ 0.53
CPNE1-202ENST00000352393 FAM159AQ6UWV7 190 aa18.35■□□□□ 0.53
CPNE1-202ENST00000352393 JPT2Q9H910 190 aa18.35■□□□□ 0.53
CPNE1-202ENST00000352393 HOXA3O43365 443 aaPredicted RBP18.34■□□□□ 0.53
CPNE1-202ENST00000352393 SRD5A1P18405 259 aa18.34■□□□□ 0.53
CPNE1-202ENST00000352393 C10orf105Q8TEF2 133 aa18.34■□□□□ 0.53
CPNE1-202ENST00000352393 DCANP1Q8TF63 244 aa18.34■□□□□ 0.53
CPNE1-202ENST00000352393 K7EMT4 169 aa18.33■□□□□ 0.52
CPNE1-202ENST00000352393 GAGE13Q4V321 117 aa18.33■□□□□ 0.52
CPNE1-202ENST00000352393 PAPPA-AS1Q5QFB9 102 aa18.33■□□□□ 0.52
CPNE1-202ENST00000352393 UBE2D1P51668 147 aa18.32■□□□□ 0.52
CPNE1-202ENST00000352393 SCGB1D4Q6XE38 83 aa18.32■□□□□ 0.52
CPNE1-202ENST00000352393 TMEM238LA0A1B0GVL6 79 aa18.32■□□□□ 0.52
CPNE1-202ENST00000352393 A6NJY4 79 aa18.32■□□□□ 0.52
CPNE1-202ENST00000352393 ID1P41134 155 aa18.32■□□□□ 0.52
CPNE1-202ENST00000352393 PMVKQ15126 192 aa18.32■□□□□ 0.52
CPNE1-202ENST00000352393 CD300EQ496F6 205 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-202ENST00000352393 PGPEP1Q9NXJ5 209 aa18.32■□□□□ 0.52
CPNE1-202ENST00000352393 SAMD13Q5VXD3 122 aa18.31■□□□□ 0.52
CPNE1-202ENST00000352393 TMEM141Q96I45 108 aa18.31■□□□□ 0.52
CPNE1-202ENST00000352393 SPTAN1Q13813 2472 aaKnown RBP18.31■□□□□ 0.52
CPNE1-202ENST00000352393 VCYO14598 125 aa18.31■□□□□ 0.52
CPNE1-202ENST00000352393 ETDBQ3ZM63 59 aa18.31■□□□□ 0.52
CPNE1-202ENST00000352393 SH2D6Q7Z4S9 175 aa18.31■□□□□ 0.52
CPNE1-202ENST00000352393 TIMM17AQ99595 171 aa18.31■□□□□ 0.52
CPNE1-202ENST00000352393 A0A087WWL8 130 aa18.3■□□□□ 0.52
CPNE1-202ENST00000352393 HERVK_113P61574 105 aa18.3■□□□□ 0.52
CPNE1-202ENST00000352393 KLHL30-AS1Q8NEE0 82 aa18.3■□□□□ 0.52
CPNE1-202ENST00000352393 J3QR89 54 aa18.29■□□□□ 0.52
CPNE1-202ENST00000352393 LGALS9O00182 355 aa18.29■□□□□ 0.52
CPNE1-202ENST00000352393 CD7P09564 240 aa18.29■□□□□ 0.52
CPNE1-202ENST00000352393 RPL39P62891 51 aaKnown RBP18.29■□□□□ 0.52
CPNE1-202ENST00000352393 KIR2DL4Q99706 377 aa18.29■□□□□ 0.52
CPNE1-202ENST00000352393 TRBV6-5A0A0K0K1A5 114 aa18.29■□□□□ 0.52
CPNE1-202ENST00000352393 TRAV12-3A0A0B4J271 114 aa18.28■□□□□ 0.52
CPNE1-202ENST00000352393 SDHAF1A6NFY7 115 aa18.28■□□□□ 0.52
CPNE1-202ENST00000352393 GNLYP22749 145 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms