RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 LINC00173Q6ZV60 143 aa6.66□□□□□ -1.34
SKAP2-201ENST00000345317 C14orf178Q8N769 122 aaPredicted RBP6.66□□□□□ -1.34
SKAP2-201ENST00000345317 IGF2BP2-AS1Q96M15 143 aa6.66□□□□□ -1.34
SKAP2-201ENST00000345317 LINC01587Q99440 93 aa6.66□□□□□ -1.34
SKAP2-201ENST00000345317 IGHV4OR15-8A0A075B7B6 117 aa6.66□□□□□ -1.34
SKAP2-201ENST00000345317 A0A087WW49 117 aa6.66□□□□□ -1.34
SKAP2-201ENST00000345317 LTAP01374 205 aa6.66□□□□□ -1.34
SKAP2-201ENST00000345317 ORMDL3Q8N138 153 aa6.66□□□□□ -1.34
SKAP2-201ENST00000345317 MSRB1Q9NZV6 116 aa6.66□□□□□ -1.34
SKAP2-201ENST00000345317 PEMTQ9UBM1 199 aa6.66□□□□□ -1.34
SKAP2-201ENST00000345317 ATRQ13535 2644 aa6.66□□□□□ -1.34
SKAP2-201ENST00000345317 HRNRQ86YZ3 2850 aaPredicted RBP6.66□□□□□ -1.34
SKAP2-201ENST00000345317 TRAV21A0A0B4J279 112 aa6.66□□□□□ -1.34
SKAP2-201ENST00000345317 LOXL1Q08397 574 aaPredicted RBP6.66□□□□□ -1.34
SKAP2-201ENST00000345317 RAX2Q96IS3 184 aa6.66□□□□□ -1.34
SKAP2-201ENST00000345317 MAP1LC3AQ9H492 121 aa6.66□□□□□ -1.34
SKAP2-201ENST00000345317 CYSLTR1Q9Y271 337 aa6.66□□□□□ -1.34
SKAP2-201ENST00000345317 CELSR2Q9HCU4 2923 aa6.66□□□□□ -1.34
SKAP2-201ENST00000345317 GCN1Q92616 2671 aaKnown RBP6.65□□□□□ -1.34
SKAP2-201ENST00000345317 IGHV7-4-1A0A0J9YVY3 117 aa6.65□□□□□ -1.34
SKAP2-201ENST00000345317 A0A1B0GW15 77 aa6.65□□□□□ -1.34
SKAP2-201ENST00000345317 ZNF256Q9Y2P7 627 aaPredicted RBP6.65□□□□□ -1.34
SKAP2-201ENST00000345317 A0A087WWL8 130 aa6.65□□□□□ -1.35
SKAP2-201ENST00000345317 OVOL1O14753 267 aa6.65□□□□□ -1.35
SKAP2-201ENST00000345317 IGLV2-8P01709 118 aa6.65□□□□□ -1.35
SKAP2-201ENST00000345317 COX8AP10176 69 aa6.65□□□□□ -1.35
SKAP2-201ENST00000345317 PLA2G2AP14555 144 aa6.65□□□□□ -1.35
SKAP2-201ENST00000345317 EDN2P20800 178 aa6.65□□□□□ -1.35
SKAP2-201ENST00000345317 TRAV26-2A0A0B4J265 109 aa6.65□□□□□ -1.35
SKAP2-201ENST00000345317 RPL35AP18077 110 aaKnown RBP6.65□□□□□ -1.35
SKAP2-201ENST00000345317 GTSF1Q8WW33 167 aa6.65□□□□□ -1.35
SKAP2-201ENST00000345317 MRPL16Q9NX20 251 aaKnown RBP6.65□□□□□ -1.35
SKAP2-201ENST00000345317 SMPXQ9UHP9 88 aa6.65□□□□□ -1.35
SKAP2-201ENST00000345317 ITPR2Q14571 2701 aa6.64□□□□□ -1.35
SKAP2-201ENST00000345317 SMIM27A0A1W2PRY6 76 aa6.64□□□□□ -1.35
SKAP2-201ENST00000345317 APOMO95445 188 aa6.64□□□□□ -1.35
SKAP2-201ENST00000345317 CHCHD1Q96BP2 118 aaKnown RBP6.64□□□□□ -1.35
SKAP2-201ENST00000345317 LOC107984156A0A0G2JMH3 177 aa6.64□□□□□ -1.35
SKAP2-201ENST00000345317 IGF1P05019 195 aa6.64□□□□□ -1.35
SKAP2-201ENST00000345317 C18orf65Q6ZTR6 163 aa6.64□□□□□ -1.35
SKAP2-201ENST00000345317 SPATA12Q7Z6I5 190 aa6.64□□□□□ -1.35
SKAP2-201ENST00000345317 ARL17AQ8IVW1 177 aa6.64□□□□□ -1.35
SKAP2-201ENST00000345317 ZNF479Q96JC4 524 aa6.64□□□□□ -1.35
SKAP2-201ENST00000345317 B5MCH6 92 aa6.64□□□□□ -1.35
SKAP2-201ENST00000345317 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.64□□□□□ -1.35
SKAP2-201ENST00000345317 CACNG7P62955 275 aa6.64□□□□□ -1.35
SKAP2-201ENST00000345317 GAGE13Q4V321 117 aa6.64□□□□□ -1.35
SKAP2-201ENST00000345317 SH2D6Q7Z4S9 175 aa6.64□□□□□ -1.35
SKAP2-201ENST00000345317 STHQ8IWL8 128 aa6.64□□□□□ -1.35
SKAP2-201ENST00000345317 PIFOQ8TCI5 191 aa6.64□□□□□ -1.35
SKAP2-201ENST00000345317 XCL2Q9UBD3 114 aa6.64□□□□□ -1.35
SKAP2-201ENST00000345317 IGHV1-24A0A0C4DH33 117 aa6.63□□□□□ -1.35
SKAP2-201ENST00000345317 C2orf70A6NJV1 201 aa6.63□□□□□ -1.35
SKAP2-201ENST00000345317 GNRH2O43555 120 aa6.63□□□□□ -1.35
SKAP2-201ENST00000345317 APRG1Q8IVJ8 170 aa6.63□□□□□ -1.35
SKAP2-201ENST00000345317 IFI27P40305 119 aaPredicted RBP6.63□□□□□ -1.35
SKAP2-201ENST00000345317 SRSF1Q07955 248 aaKnown RBP eCLIP6.63□□□□□ -1.35
SKAP2-201ENST00000345317 TTC32Q5I0X7 151 aa6.63□□□□□ -1.35
SKAP2-201ENST00000345317 Q6AWC8 147 aa6.63□□□□□ -1.35
SKAP2-201ENST00000345317 PRSS57Q6UWY2 283 aa6.63□□□□□ -1.35
SKAP2-201ENST00000345317 SMIM20Q8N5G0 67 aa6.63□□□□□ -1.35
SKAP2-201ENST00000345317 OR9G4Q8NGQ1 327 aa6.63□□□□□ -1.35
SKAP2-201ENST00000345317 TMEM190Q8WZ59 177 aa6.63□□□□□ -1.35
SKAP2-201ENST00000345317 LINC01619G3V211 115 aa6.63□□□□□ -1.35
SKAP2-201ENST00000345317 ZNF80P51504 273 aaPredicted RBP6.63□□□□□ -1.35
SKAP2-201ENST00000345317 ANXA2RQ3ZCQ2 193 aa6.63□□□□□ -1.35
SKAP2-201ENST00000345317 SFTA2Q6UW10 78 aa6.63□□□□□ -1.35
SKAP2-201ENST00000345317 FAM231DQ6ZW35 169 aa6.63□□□□□ -1.35
SKAP2-201ENST00000345317 SCRT2Q9NQ03 307 aa6.63□□□□□ -1.35
SKAP2-201ENST00000345317 SMAD5-AS1Q9Y6J3 95 aa6.63□□□□□ -1.35
SKAP2-201ENST00000345317 VWC2LB2RUY7 222 aa6.62□□□□□ -1.35
SKAP2-201ENST00000345317 GATA1P15976 413 aaPredicted RBP6.62□□□□□ -1.35
SKAP2-201ENST00000345317 MYOZ3Q8TDC0 251 aa6.62□□□□□ -1.35
SKAP2-201ENST00000345317 JMJD8Q96S16 334 aa6.62□□□□□ -1.35
SKAP2-201ENST00000345317 CITED1Q99966 193 aa6.62□□□□□ -1.35
SKAP2-201ENST00000345317 ELANEP08246 267 aa6.62□□□□□ -1.35
SKAP2-201ENST00000345317 WFDC2Q14508 124 aa6.62□□□□□ -1.35
SKAP2-201ENST00000345317 ATP5L2Q7Z4Y8 100 aa6.62□□□□□ -1.35
SKAP2-201ENST00000345317 UNC79Q9P2D8 2635 aa6.62□□□□□ -1.35
SKAP2-201ENST00000345317 DNAJC9-AS1A6NH13 148 aa6.62□□□□□ -1.35
SKAP2-201ENST00000345317 F8W735 103 aaPredicted RBP6.62□□□□□ -1.35
SKAP2-201ENST00000345317 IGHV3-53P01767 116 aa6.62□□□□□ -1.35
SKAP2-201ENST00000345317 SYT8Q8NBV8 401 aa6.62□□□□□ -1.35
SKAP2-201ENST00000345317 ZFAND3Q9H8U3 227 aa6.62□□□□□ -1.35
SKAP2-201ENST00000345317 ZNF492Q9P255 531 aa6.62□□□□□ -1.35
SKAP2-201ENST00000345317 LGALS1P09382 135 aaKnown RBP6.61□□□□□ -1.35
SKAP2-201ENST00000345317 SCGB1C2P0DMR2 95 aa6.61□□□□□ -1.35
SKAP2-201ENST00000345317 HERV-K104P63124 156 aa6.61□□□□□ -1.35
SKAP2-201ENST00000345317 RASL11AQ6T310 242 aa6.61□□□□□ -1.35
SKAP2-201ENST00000345317 HIST1H4GQ99525 98 aa6.61□□□□□ -1.35
SKAP2-201ENST00000345317 H3BMG7 143 aa6.61□□□□□ -1.35
SKAP2-201ENST00000345317 LEPP41159 167 aa6.61□□□□□ -1.35
SKAP2-201ENST00000345317 DGAT2L7PQ6IED9 249 aa6.61□□□□□ -1.35
SKAP2-201ENST00000345317 AMTNQ6UX39 209 aa6.61□□□□□ -1.35
SKAP2-201ENST00000345317 Q6ZQT7 251 aa6.61□□□□□ -1.35
SKAP2-201ENST00000345317 K7ERJ3 54 aa6.61□□□□□ -1.35
SKAP2-201ENST00000345317 NEGR1Q7Z3B1 354 aa6.61□□□□□ -1.35
SKAP2-201ENST00000345317 AGRNO00468 2067 aa6.61□□□□□ -1.35
SKAP2-201ENST00000345317 Q6YL49 198 aa6.6□□□□□ -1.35
SKAP2-201ENST00000345317 CITED2Q99967 270 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms