RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SPHARQ15513 63 aa6.13□□□□□ -1.43
ATXN3-201ENST00000340660 KRTAP13-2Q52LG2 175 aa6.13□□□□□ -1.43
ATXN3-201ENST00000340660 ZNF506Q5JVG8 444 aa6.13□□□□□ -1.43
ATXN3-201ENST00000340660 FP248Q71RG6 208 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-201ENST00000340660 LINC00305Q7Z4B0 112 aa6.13□□□□□ -1.43
ATXN3-201ENST00000340660 KCNS1Q96KK3 526 aa6.13□□□□□ -1.43
ATXN3-201ENST00000340660 MIXL1Q9H2W2 232 aa6.13□□□□□ -1.43
ATXN3-201ENST00000340660 PGPEP1LA6NFU8 196 aa6.12□□□□□ -1.43
ATXN3-201ENST00000340660 GZMBP10144 247 aa6.12□□□□□ -1.43
ATXN3-201ENST00000340660 AKR1C1Q04828 323 aa6.12□□□□□ -1.43
ATXN3-201ENST00000340660 ZFP2Q6ZN57 461 aa6.12□□□□□ -1.43
ATXN3-201ENST00000340660 MND1Q9BWT6 205 aa6.12□□□□□ -1.43
ATXN3-201ENST00000340660 IGLV8-61A0A075B6I0 122 aa6.11□□□□□ -1.43
ATXN3-201ENST00000340660 TRBV7-9A0A0J9YWB2 115 aa6.11□□□□□ -1.43
ATXN3-201ENST00000340660 CDS2O95674 445 aa6.11□□□□□ -1.43
ATXN3-201ENST00000340660 RAB2AP61019 212 aa6.11□□□□□ -1.43
ATXN3-201ENST00000340660 GAGE2BQ13066 116 aa6.11□□□□□ -1.43
ATXN3-201ENST00000340660 TRAM1Q15629 374 aa6.11□□□□□ -1.43
ATXN3-201ENST00000340660 LAIR2Q6ISS4 152 aa6.11□□□□□ -1.43
ATXN3-201ENST00000340660 UFSP1Q6NVU6 142 aa6.11□□□□□ -1.43
ATXN3-201ENST00000340660 COX6B2Q6YFQ2 88 aa6.11□□□□□ -1.43
ATXN3-201ENST00000340660 S100A7AQ86SG5 101 aa6.11□□□□□ -1.43
ATXN3-201ENST00000340660 CHCHD5Q9BSY4 110 aa6.11□□□□□ -1.43
ATXN3-201ENST00000340660 RNF24Q9Y225 148 aa6.11□□□□□ -1.43
ATXN3-201ENST00000340660 PKIGQ9Y2B9 76 aa6.11□□□□□ -1.43
ATXN3-201ENST00000340660 GVQW2A0A096LPI5 108 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-201ENST00000340660 TRAV8-4A0A0B4J246 113 aa6.1□□□□□ -1.43
ATXN3-201ENST00000340660 NDUFB4O95168 129 aa6.1□□□□□ -1.43
ATXN3-201ENST00000340660 P01737 135 aa6.1□□□□□ -1.43
ATXN3-201ENST00000340660 ZNF674Q2M3X9 581 aa6.1□□□□□ -1.43
ATXN3-201ENST00000340660 CFAP161Q6P656 301 aa6.1□□□□□ -1.43
ATXN3-201ENST00000340660 SELENOHQ8IZQ5 122 aaKnown RBP6.1□□□□□ -1.43
ATXN3-201ENST00000340660 EXOC3-AS1Q8N2X6 119 aa6.1□□□□□ -1.43
ATXN3-201ENST00000340660 ATP5SQ99766 215 aa6.1□□□□□ -1.43
ATXN3-201ENST00000340660 OPRPNQ99935 248 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-201ENST00000340660 PAIP2BQ9ULR5 123 aaKnown RBP6.1□□□□□ -1.43
ATXN3-201ENST00000340660 IFITM10A6NMD0 228 aa6.09□□□□□ -1.43
ATXN3-201ENST00000340660 GYG2O15488 501 aa6.09□□□□□ -1.43
ATXN3-201ENST00000340660 PTTG1O95997 202 aa6.09□□□□□ -1.43
ATXN3-201ENST00000340660 HIST1H1EP10412 219 aaKnown RBP6.09□□□□□ -1.43
ATXN3-201ENST00000340660 CAV2P51636 162 aa6.09□□□□□ -1.43
ATXN3-201ENST00000340660 UBE2D3P61077 147 aa6.09□□□□□ -1.43
ATXN3-201ENST00000340660 RAB11AP62491 216 aa6.09□□□□□ -1.43
ATXN3-201ENST00000340660 UBE2D2P62837 147 aa6.09□□□□□ -1.43
ATXN3-201ENST00000340660 TRBV19A0A075B6N1 114 aa6.08□□□□□ -1.44
ATXN3-201ENST00000340660 RHODO00212 210 aa6.08□□□□□ -1.44
ATXN3-201ENST00000340660 SULT1A3P0DMM9 295 aa6.08□□□□□ -1.44
ATXN3-201ENST00000340660 SULT1A4P0DMN0 295 aa6.08□□□□□ -1.44
ATXN3-201ENST00000340660 RCVRNP35243 200 aa6.08□□□□□ -1.44
ATXN3-201ENST00000340660 OR5H6Q8NGV6 325 aa6.08□□□□□ -1.44
ATXN3-201ENST00000340660 RAB2BQ8WUD1 216 aa6.08□□□□□ -1.44
ATXN3-201ENST00000340660 ZNF486Q96H40 463 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-201ENST00000340660 FKBP14Q9NWM8 211 aa6.08□□□□□ -1.44
ATXN3-201ENST00000340660 PRELID1Q9Y255 219 aa6.08□□□□□ -1.44
ATXN3-201ENST00000340660 PKIAP61925 76 aa6.07□□□□□ -1.44
ATXN3-201ENST00000340660 GAGE6Q13070 117 aa6.07□□□□□ -1.44
ATXN3-201ENST00000340660 GLYATL2Q8WU03 294 aa6.07□□□□□ -1.44
ATXN3-201ENST00000340660 LINC00526Q96FQ7 95 aa6.07□□□□□ -1.44
ATXN3-201ENST00000340660 CARD19Q96LW7 228 aa6.07□□□□□ -1.44
ATXN3-201ENST00000340660 JPT2Q9H910 190 aa6.07□□□□□ -1.44
ATXN3-201ENST00000340660 WFDC1Q9HC57 220 aa6.07□□□□□ -1.44
ATXN3-201ENST00000340660 ACOT13Q9NPJ3 140 aa6.07□□□□□ -1.44
ATXN3-201ENST00000340660 ANAPC11Q9NYG5 84 aa6.07□□□□□ -1.44
ATXN3-201ENST00000340660 CACFD1Q9UGQ2 172 aa6.07□□□□□ -1.44
ATXN3-201ENST00000340660 IAPPP10997 89 aa6.06□□□□□ -1.44
ATXN3-201ENST00000340660 MYL9P24844 172 aa6.06□□□□□ -1.44
ATXN3-201ENST00000340660 SELENOTP62341 195 aa6.06□□□□□ -1.44
ATXN3-201ENST00000340660 PCOTHQ58A44 107 aa6.06□□□□□ -1.44
ATXN3-201ENST00000340660 PRSS48Q7RTY5 328 aa6.06□□□□□ -1.44
ATXN3-201ENST00000340660 PTH2Q96A98 100 aa6.06□□□□□ -1.44
ATXN3-201ENST00000340660 A0A0A6YYH2 397 aa6.05□□□□□ -1.44
ATXN3-201ENST00000340660 A6NJ64 397 aa6.05□□□□□ -1.44
ATXN3-201ENST00000340660 CTAG1AP78358 180 aa6.05□□□□□ -1.44
ATXN3-201ENST00000340660 TMEM268Q5VZI3 342 aa6.05□□□□□ -1.44
ATXN3-201ENST00000340660 IZUMO2Q6UXV1 221 aa6.05□□□□□ -1.44
ATXN3-201ENST00000340660 C20orf203Q8NBC4 194 aa6.05□□□□□ -1.44
ATXN3-201ENST00000340660 URB1-AS1Q96HZ7 61 aa6.05□□□□□ -1.44
ATXN3-201ENST00000340660 A0A1B0GVG6 124 aa6.04□□□□□ -1.44
ATXN3-201ENST00000340660 SMCO3A2RU48 225 aa6.04□□□□□ -1.44
ATXN3-201ENST00000340660 ZNF861PO60384 105 aa6.04□□□□□ -1.44
ATXN3-201ENST00000340660 B3GALNT1O75752 331 aa6.04□□□□□ -1.44
ATXN3-201ENST00000340660 MT2AP02795 61 aa6.04□□□□□ -1.44
ATXN3-201ENST00000340660 ASB13Q8WXK3 278 aa6.04□□□□□ -1.44
ATXN3-201ENST00000340660 COPZ2Q9P299 210 aa6.04□□□□□ -1.44
ATXN3-201ENST00000340660 COMMD3Q9UBI1 195 aa6.04□□□□□ -1.44
ATXN3-201ENST00000340660 LOC107984640A0A0U1RRK4 108 aa6.03□□□□□ -1.44
ATXN3-201ENST00000340660 A8MWV9 139 aa6.03□□□□□ -1.44
ATXN3-201ENST00000340660 TNFRSF6BO95407 300 aa6.03□□□□□ -1.44
ATXN3-201ENST00000340660 EIF5AL1Q6IS14 154 aaKnown RBP6.03□□□□□ -1.44
ATXN3-201ENST00000340660 NTM-AS1Q6ZSK4 140 aa6.03□□□□□ -1.44
ATXN3-201ENST00000340660 TRBV7-3A0A075B6L6 115 aa6.02□□□□□ -1.45
ATXN3-201ENST00000340660 TRAV6A0A075B6T7 132 aa6.02□□□□□ -1.45
ATXN3-201ENST00000340660 AGPAT2O15120 278 aa6.02□□□□□ -1.45
ATXN3-201ENST00000340660 SLC38A11Q08AI6 406 aa6.02□□□□□ -1.45
ATXN3-201ENST00000340660 DNAL1Q4LDG9 190 aa6.02□□□□□ -1.45
ATXN3-201ENST00000340660 LHFPL1Q86WI0 220 aa6.02□□□□□ -1.45
ATXN3-201ENST00000340660 SOSTQ9BQB4 213 aa6.02□□□□□ -1.45
ATXN3-201ENST00000340660 RBAKDNA6NC62 111 aa6.01□□□□□ -1.45
ATXN3-201ENST00000340660 K7EPK0 472 aa6.01□□□□□ -1.45
ATXN3-201ENST00000340660 COX7A2P2O60397 106 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms