RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 TRAV12-2A0A075B6T6 113 aa11.9□□□□□ -0.51
VARS2-201ENST00000321897 IGKV2D-26A0A0A0MRZ7 120 aa11.9□□□□□ -0.51
VARS2-201ENST00000321897 H3BRN7 92 aa11.9□□□□□ -0.51
VARS2-201ENST00000321897 PRB1P04280 392 aa11.9□□□□□ -0.51
VARS2-201ENST00000321897 FOXE3Q13461 319 aa11.9□□□□□ -0.51
VARS2-201ENST00000321897 SLC50A1Q9BRV3 221 aa11.9□□□□□ -0.51
VARS2-201ENST00000321897 MOB4Q9Y3A3 225 aa11.9□□□□□ -0.51
VARS2-201ENST00000321897 FLNBO75369 2602 aaKnown RBP11.89□□□□□ -0.51
VARS2-201ENST00000321897 BLCAPP62952 87 aa11.89□□□□□ -0.51
VARS2-201ENST00000321897 C2orf66Q6UXQ4 117 aa11.89□□□□□ -0.51
VARS2-201ENST00000321897 SMIM20Q8N5G0 67 aa11.89□□□□□ -0.51
VARS2-201ENST00000321897 KNCNA6PVL3 124 aa11.89□□□□□ -0.51
VARS2-201ENST00000321897 SNRPD3P62318 126 aaKnown RBP11.89□□□□□ -0.51
VARS2-201ENST00000321897 TACC2O95359 2948 aa11.89□□□□□ -0.51
VARS2-201ENST00000321897 RNASE1P07998 156 aaKnown RBP11.89□□□□□ -0.51
VARS2-201ENST00000321897 CR1LQ2VPA4 569 aa11.89□□□□□ -0.51
VARS2-201ENST00000321897 URB1-AS1Q96HZ7 61 aa11.89□□□□□ -0.51
VARS2-201ENST00000321897 MYMXA0A1B0GTQ4 84 aa11.88□□□□□ -0.51
VARS2-201ENST00000321897 MEIG1Q5JSS6 88 aa11.88□□□□□ -0.51
VARS2-201ENST00000321897 FGF6P10767 208 aa11.88□□□□□ -0.51
VARS2-201ENST00000321897 NBL1P41271 181 aa11.88□□□□□ -0.51
VARS2-201ENST00000321897 SYNJ2BPP57105 145 aa11.88□□□□□ -0.51
VARS2-201ENST00000321897 PPDPFLQ8WWR9 84 aa11.88□□□□□ -0.51
VARS2-201ENST00000321897 DUX3Q96PT4 197 aa11.88□□□□□ -0.51
VARS2-201ENST00000321897 RNF5Q99942 180 aa11.88□□□□□ -0.51
VARS2-201ENST00000321897 ADAMTS20P59510 1910 aa11.88□□□□□ -0.51
VARS2-201ENST00000321897 MINOS1Q5TGZ0 78 aa11.87□□□□□ -0.51
VARS2-201ENST00000321897 MINOS1-NBL1R4GNA1 71 aa11.87□□□□□ -0.51
VARS2-201ENST00000321897 IGHV7-81A0A0B4J1V7 117 aa11.87□□□□□ -0.51
VARS2-201ENST00000321897 SIVA1O15304 175 aa11.87□□□□□ -0.51
VARS2-201ENST00000321897 C8orf86Q6ZUL3 223 aa11.87□□□□□ -0.51
VARS2-201ENST00000321897 DCHS1Q96JQ0 3298 aa11.87□□□□□ -0.51
VARS2-201ENST00000321897 ADARB2-AS1A8MUL3 147 aa11.86□□□□□ -0.51
VARS2-201ENST00000321897 INSL3P51460 131 aa11.86□□□□□ -0.51
VARS2-201ENST00000321897 C2orf82Q6UX34 121 aa11.86□□□□□ -0.51
VARS2-201ENST00000321897 AGRNO00468 2067 aa11.86□□□□□ -0.51
VARS2-201ENST00000321897 C19orf71A6NCJ1 209 aa11.86□□□□□ -0.51
VARS2-201ENST00000321897 HIST2H2BDQ6DRA6 164 aa11.86□□□□□ -0.51
VARS2-201ENST00000321897 Q8N8P6 123 aa11.86□□□□□ -0.51
VARS2-201ENST00000321897 VCX2Q9H322 139 aa11.86□□□□□ -0.51
VARS2-201ENST00000321897 TRAV21A0A0B4J279 112 aa11.86□□□□□ -0.51
VARS2-201ENST00000321897 RNF223E7ERA6 249 aa11.86□□□□□ -0.51
VARS2-201ENST00000321897 F8VRH5 84 aa11.86□□□□□ -0.51
VARS2-201ENST00000321897 SCGB1A1P11684 91 aa11.86□□□□□ -0.51
VARS2-201ENST00000321897 UBE2E1P51965 193 aa11.86□□□□□ -0.51
VARS2-201ENST00000321897 LYPD1Q8N2G4 141 aa11.86□□□□□ -0.51
VARS2-201ENST00000321897 KLF12Q9Y4X4 402 aa11.86□□□□□ -0.51
VARS2-201ENST00000321897 CTSGP08311 255 aa11.85□□□□□ -0.51
VARS2-201ENST00000321897 NTN5Q8WTR8 489 aaPredicted RBP11.85□□□□□ -0.51
VARS2-201ENST00000321897 DMXL1Q9Y485 3027 aa11.85□□□□□ -0.51
VARS2-201ENST00000321897 IGHV4-61A0A0C4DH41 118 aa11.85□□□□□ -0.51
VARS2-201ENST00000321897 IGHV4-38-2P0DP08 117 aa11.85□□□□□ -0.51
VARS2-201ENST00000321897 AGPAT4-IT1Q9H0P7 198 aa11.85□□□□□ -0.51
VARS2-201ENST00000321897 KLK9Q9UKQ9 250 aa11.85□□□□□ -0.51
VARS2-201ENST00000321897 TRAV8-3A0A0A6YYJ7 113 aa11.85□□□□□ -0.51
VARS2-201ENST00000321897 SUMO2P61956 95 aaKnown RBP11.84□□□□□ -0.51
VARS2-201ENST00000321897 MT-ATP8P03928 68 aa11.84□□□□□ -0.51
VARS2-201ENST00000321897 HOXB4P17483 251 aaPredicted RBP11.84□□□□□ -0.51
VARS2-201ENST00000321897 SPINK13Q1W4C9 94 aa11.84□□□□□ -0.51
VARS2-201ENST00000321897 TP53TG1Q9Y2A0 90 aa11.84□□□□□ -0.51
VARS2-201ENST00000321897 SPXQ9BT56 116 aa11.84□□□□□ -0.51
VARS2-201ENST00000321897 C1QTNF4Q9BXJ3 329 aa11.84□□□□□ -0.51
VARS2-201ENST00000321897 ODF1Q14990 250 aa11.83□□□□□ -0.52
VARS2-201ENST00000321897 OR11H6Q8NGC7 330 aa11.83□□□□□ -0.52
VARS2-201ENST00000321897 ZNF625Q96I27 306 aaPredicted RBP11.83□□□□□ -0.52
VARS2-201ENST00000321897 ANKRD17O75179 2603 aaKnown RBP11.83□□□□□ -0.52
VARS2-201ENST00000321897 RNF183Q96D59 192 aa11.83□□□□□ -0.52
VARS2-201ENST00000321897 PRSS22Q9GZN4 317 aa11.83□□□□□ -0.52
VARS2-201ENST00000321897 CFHR4Q92496 578 aa11.83□□□□□ -0.52
VARS2-201ENST00000321897 FANCD2OSQ96PS1 177 aa11.83□□□□□ -0.52
VARS2-201ENST00000321897 MLST8Q9BVC4 326 aa11.83□□□□□ -0.52
VARS2-201ENST00000321897 RS1O15537 224 aa11.82□□□□□ -0.52
VARS2-201ENST00000321897 GNRH2O43555 120 aa11.82□□□□□ -0.52
VARS2-201ENST00000321897 SLC25A20O43772 301 aa11.82□□□□□ -0.52
VARS2-201ENST00000321897 LINC01587Q99440 93 aa11.82□□□□□ -0.52
VARS2-201ENST00000321897 TRBV12-3P01733 135 aa11.81□□□□□ -0.52
VARS2-201ENST00000321897 IGHV3-53P01767 116 aa11.81□□□□□ -0.52
VARS2-201ENST00000321897 FAM110DQ8TAY7 271 aaPredicted RBP11.81□□□□□ -0.52
VARS2-201ENST00000321897 UBE2E2Q96LR5 201 aa11.81□□□□□ -0.52
VARS2-201ENST00000321897 FOXI1Q12951 378 aa11.81□□□□□ -0.52
VARS2-201ENST00000321897 PDE6HQ13956 83 aa11.81□□□□□ -0.52
VARS2-201ENST00000321897 DEFB136Q30KP8 78 aa11.81□□□□□ -0.52
VARS2-201ENST00000321897 SMIM2Q9BVW6 85 aa11.81□□□□□ -0.52
VARS2-201ENST00000321897 A0A087WX48 190 aa11.81□□□□□ -0.52
VARS2-201ENST00000321897 PIP4P2Q8N4L2 257 aa11.81□□□□□ -0.52
VARS2-201ENST00000321897 Q8N9W7 124 aa11.81□□□□□ -0.52
VARS2-201ENST00000321897 DPH3P1Q9H4G8 78 aa11.81□□□□□ -0.52
VARS2-201ENST00000321897 RPL39LQ96EH5 51 aaKnown RBP11.8□□□□□ -0.52
VARS2-201ENST00000321897 COL5A1P20908 1838 aaPredicted RBP11.8□□□□□ -0.52
VARS2-201ENST00000321897 IGHV1-69DA0A0B4J2H0 117 aa11.8□□□□□ -0.52
VARS2-201ENST00000321897 IGHV1-69P01742 117 aa11.8□□□□□ -0.52
VARS2-201ENST00000321897 TMEM14CQ9P0S9 112 aa11.8□□□□□ -0.52
VARS2-201ENST00000321897 IGLV11-55A0A075B6I3 123 aa11.8□□□□□ -0.52
VARS2-201ENST00000321897 CD28P10747 220 aa11.8□□□□□ -0.52
VARS2-201ENST00000321897 ZNF80P51504 273 aaPredicted RBP11.8□□□□□ -0.52
VARS2-201ENST00000321897 PAPPA-AS1Q5QFB9 102 aa11.8□□□□□ -0.52
VARS2-201ENST00000321897 SPANXB1Q9NS25 103 aaPredicted RBP11.8□□□□□ -0.52
VARS2-201ENST00000321897 DMDP11532 3685 aa11.79□□□□□ -0.52
VARS2-201ENST00000321897 C19orf84I3L1E1 186 aa11.79□□□□□ -0.52
VARS2-201ENST00000321897 GAGE5Q13069 117 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms