RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 PPP1R17O96001 155 aa6.56□□□□□ -1.36
CLK1-201ENST00000321356 RNASE4P34096 147 aaKnown RBP6.56□□□□□ -1.36
CLK1-201ENST00000321356 LINC00315P59091 139 aa6.56□□□□□ -1.36
CLK1-201ENST00000321356 RPL32P62910 135 aaKnown RBP6.56□□□□□ -1.36
CLK1-201ENST00000321356 C2orf66Q6UXQ4 117 aa6.56□□□□□ -1.36
CLK1-201ENST00000321356 FOXI2Q6ZQN5 318 aa6.56□□□□□ -1.36
CLK1-201ENST00000321356 OR11H1Q8NG94 326 aa6.56□□□□□ -1.36
CLK1-201ENST00000321356 OR11H2Q8NH07 326 aa6.56□□□□□ -1.36
CLK1-201ENST00000321356 BAALCQ8WXS3 180 aa6.56□□□□□ -1.36
CLK1-201ENST00000321356 KIF25-AS1Q9Y6Z4 181 aa6.56□□□□□ -1.36
CLK1-201ENST00000321356 MUC4Q99102 2169 aa6.55□□□□□ -1.36
CLK1-201ENST00000321356 NCOR2Q9Y618 2525 aa6.55□□□□□ -1.36
CLK1-201ENST00000321356 A6NDX4 124 aa6.55□□□□□ -1.36
CLK1-201ENST00000321356 F6UB75 175 aa6.55□□□□□ -1.36
CLK1-201ENST00000321356 C19orf84I3L1E1 186 aa6.55□□□□□ -1.36
CLK1-201ENST00000321356 GNRH2O43555 120 aa6.55□□□□□ -1.36
CLK1-201ENST00000321356 IGLV1-40P01703 118 aa6.55□□□□□ -1.36
CLK1-201ENST00000321356 ZNF479Q96JC4 524 aa6.55□□□□□ -1.36
CLK1-201ENST00000321356 HIST1H4GQ99525 98 aa6.55□□□□□ -1.36
CLK1-201ENST00000321356 KLK15Q9H2R5 256 aa6.55□□□□□ -1.36
CLK1-201ENST00000321356 IGHV4-61A0A0C4DH41 118 aa6.54□□□□□ -1.36
CLK1-201ENST00000321356 PRSS29PA6NIE9 313 aa6.54□□□□□ -1.36
CLK1-201ENST00000321356 KLLNB2CW77 178 aa6.54□□□□□ -1.36
CLK1-201ENST00000321356 LGALS1P09382 135 aaKnown RBP6.54□□□□□ -1.36
CLK1-201ENST00000321356 IGHV4-38-2P0DP08 117 aa6.54□□□□□ -1.36
CLK1-201ENST00000321356 RIPPLY3P57055 190 aa6.54□□□□□ -1.36
CLK1-201ENST00000321356 RRN3P1Q2M238 152 aa6.54□□□□□ -1.36
CLK1-201ENST00000321356 RHPN1-AS1Q9BWJ2 59 aa6.54□□□□□ -1.36
CLK1-201ENST00000321356 ZFHX3Q15911 3703 aa6.54□□□□□ -1.36
CLK1-201ENST00000321356 TEX48A0A1B0GUV7 120 aa6.53□□□□□ -1.36
CLK1-201ENST00000321356 F8W1H4 67 aa6.53□□□□□ -1.36
CLK1-201ENST00000321356 IGHV3-11P01762 117 aa6.53□□□□□ -1.36
CLK1-201ENST00000321356 MGPP08493 103 aa6.53□□□□□ -1.36
CLK1-201ENST00000321356 COX6B1P14854 86 aa6.53□□□□□ -1.36
CLK1-201ENST00000321356 DAZ1Q9NQZ3 744 aaKnown RBP6.53□□□□□ -1.36
CLK1-201ENST00000321356 LINC01549A6NIU2 74 aa6.53□□□□□ -1.36
CLK1-201ENST00000321356 PF4V1P10720 104 aa6.53□□□□□ -1.36
CLK1-201ENST00000321356 POLR2KP53803 58 aaKnown RBP6.53□□□□□ -1.36
CLK1-201ENST00000321356 CFHR3Q02985 330 aa6.53□□□□□ -1.36
CLK1-201ENST00000321356 LY6EQ16553 131 aa6.53□□□□□ -1.36
CLK1-201ENST00000321356 C10orf105Q8TEF2 133 aa6.53□□□□□ -1.36
CLK1-201ENST00000321356 PRADC1Q9BSG0 188 aa6.53□□□□□ -1.36
CLK1-201ENST00000321356 IGIPA6NJ69 53 aa6.52□□□□□ -1.37
CLK1-201ENST00000321356 H3BUX3 64 aa6.52□□□□□ -1.37
CLK1-201ENST00000321356 K7EMT4 169 aa6.52□□□□□ -1.37
CLK1-201ENST00000321356 DUSP14O95147 198 aaKnown RBP6.52□□□□□ -1.37
CLK1-201ENST00000321356 TSHBP01222 138 aa6.52□□□□□ -1.37
CLK1-201ENST00000321356 CRYGDP07320 174 aa6.52□□□□□ -1.37
CLK1-201ENST00000321356 RPL11P62913 178 aaKnown RBP6.52□□□□□ -1.37
CLK1-201ENST00000321356 LY6DQ14210 128 aa6.52□□□□□ -1.37
CLK1-201ENST00000321356 Q6ZS46 218 aa6.52□□□□□ -1.37
CLK1-201ENST00000321356 LCNL1Q6ZST4 164 aa6.52□□□□□ -1.37
CLK1-201ENST00000321356 PIMREGQ9BSJ6 248 aa6.52□□□□□ -1.37
CLK1-201ENST00000321356 SPANXB1Q9NS25 103 aaPredicted RBP6.52□□□□□ -1.37
CLK1-201ENST00000321356 CYSLTR1Q9Y271 337 aa6.52□□□□□ -1.37
CLK1-201ENST00000321356 IGLV4-69A0A075B6H9 119 aa6.51□□□□□ -1.37
CLK1-201ENST00000321356 BLCAPP62952 87 aa6.51□□□□□ -1.37
CLK1-201ENST00000321356 RPL24P83731 157 aaKnown RBP6.51□□□□□ -1.37
CLK1-201ENST00000321356 SAMD13Q5VXD3 122 aa6.51□□□□□ -1.37
CLK1-201ENST00000321356 MORN3Q6PF18 240 aaPredicted RBP6.51□□□□□ -1.37
CLK1-201ENST00000321356 DCANP1Q8TF63 244 aa6.51□□□□□ -1.37
CLK1-201ENST00000321356 PRO0461Q9UI25 63 aa6.51□□□□□ -1.37
CLK1-201ENST00000321356 ZNF580Q9UK33 172 aa6.51□□□□□ -1.37
CLK1-201ENST00000321356 MAP1AP78559 2803 aaPredicted RBP6.51□□□□□ -1.37
CLK1-201ENST00000321356 CELSR2Q9HCU4 2923 aa6.51□□□□□ -1.37
CLK1-201ENST00000321356 VPS13CQ709C8 3753 aa6.51□□□□□ -1.37
CLK1-201ENST00000321356 NDUFS8O00217 210 aa6.51□□□□□ -1.37
CLK1-201ENST00000321356 WFDC2Q14508 124 aa6.51□□□□□ -1.37
CLK1-201ENST00000321356 SUMO4Q6EEV6 95 aa6.51□□□□□ -1.37
CLK1-201ENST00000321356 ZFP2Q6ZN57 461 aa6.51□□□□□ -1.37
CLK1-201ENST00000321356 CFAP46Q8IYW2 2715 aa6.5□□□□□ -1.37
CLK1-201ENST00000321356 IGKV3-7A0A075B6H7 116 aa6.5□□□□□ -1.37
CLK1-201ENST00000321356 TRBV6-5A0A0K0K1A5 114 aa6.5□□□□□ -1.37
CLK1-201ENST00000321356 C11orf86A6NJI1 115 aa6.5□□□□□ -1.37
CLK1-201ENST00000321356 ZNF815PA8K554 130 aa6.5□□□□□ -1.37
CLK1-201ENST00000321356 H3BMG7 143 aa6.5□□□□□ -1.37
CLK1-201ENST00000321356 LGALS9O00182 355 aa6.5□□□□□ -1.37
CLK1-201ENST00000321356 EDN2P20800 178 aa6.5□□□□□ -1.37
CLK1-201ENST00000321356 ID1P41134 155 aa6.5□□□□□ -1.37
CLK1-201ENST00000321356 UBE2D1P51668 147 aa6.5□□□□□ -1.37
CLK1-201ENST00000321356 PAPPA-AS1Q5QFB9 102 aa6.5□□□□□ -1.37
CLK1-201ENST00000321356 FAM159AQ6UWV7 190 aa6.5□□□□□ -1.37
CLK1-201ENST00000321356 TMEM141Q96I45 108 aa6.5□□□□□ -1.37
CLK1-201ENST00000321356 ODF3Q96PU9 254 aa6.5□□□□□ -1.37
CLK1-201ENST00000321356 TIMM17AQ99595 171 aa6.5□□□□□ -1.37
CLK1-201ENST00000321356 TP53TG1Q9Y2A0 90 aa6.5□□□□□ -1.37
CLK1-201ENST00000321356 TRBV27A0A0K0K1C4 114 aa6.49□□□□□ -1.37
CLK1-201ENST00000321356 VCYO14598 125 aa6.49□□□□□ -1.37
CLK1-201ENST00000321356 PMVKQ15126 192 aa6.49□□□□□ -1.37
CLK1-201ENST00000321356 PLEKHB2Q96CS7 222 aa6.49□□□□□ -1.37
CLK1-201ENST00000321356 JPT2Q9H910 190 aa6.49□□□□□ -1.37
CLK1-201ENST00000321356 TMEM238LA0A1B0GVL6 79 aa6.49□□□□□ -1.37
CLK1-201ENST00000321356 A6NJY4 79 aa6.49□□□□□ -1.37
CLK1-201ENST00000321356 TMEM238C9JI98 176 aa6.49□□□□□ -1.37
CLK1-201ENST00000321356 HOXA3O43365 443 aaPredicted RBP6.49□□□□□ -1.37
CLK1-201ENST00000321356 SRD5A1P18405 259 aa6.49□□□□□ -1.37
CLK1-201ENST00000321356 GNLYP22749 145 aa6.49□□□□□ -1.37
CLK1-201ENST00000321356 GAGE13Q4V321 117 aa6.49□□□□□ -1.37
CLK1-201ENST00000321356 AMTNQ6UX39 209 aa6.49□□□□□ -1.37
CLK1-201ENST00000321356 C9orf85Q96MD7 179 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms