RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 SMPXQ9UHP9 88 aa11.39□□□□□ -0.59
TFE3-201ENST00000315869 PRR9Q5T870 116 aa11.38□□□□□ -0.59
TFE3-201ENST00000315869 CHTOPQ9Y3Y2 248 aaKnown RBP11.38□□□□□ -0.59
TFE3-201ENST00000315869 G3V4G9 280 aa11.38□□□□□ -0.59
TFE3-201ENST00000315869 TRBV12-3P01733 135 aa11.38□□□□□ -0.59
TFE3-201ENST00000315869 UBE2E1P51965 193 aa11.38□□□□□ -0.59
TFE3-201ENST00000315869 WFDC2Q14508 124 aa11.38□□□□□ -0.59
TFE3-201ENST00000315869 ETDBQ3ZM63 59 aa11.38□□□□□ -0.59
TFE3-201ENST00000315869 NF1P21359 2839 aa11.38□□□□□ -0.59
TFE3-201ENST00000315869 TRAV41A0A0B4J266 112 aa11.37□□□□□ -0.59
TFE3-201ENST00000315869 IGKV3-20P01619 116 aa11.37□□□□□ -0.59
TFE3-201ENST00000315869 IGHV4-39P01824 125 aa11.37□□□□□ -0.59
TFE3-201ENST00000315869 SMIM2Q9BVW6 85 aa11.37□□□□□ -0.59
TFE3-201ENST00000315869 SIRPDQ9H106 197 aa11.37□□□□□ -0.59
TFE3-201ENST00000315869 CD300EQ496F6 205 aaPredicted RBP11.37□□□□□ -0.59
TFE3-201ENST00000315869 COX8CQ7Z4L0 72 aa11.37□□□□□ -0.59
TFE3-201ENST00000315869 SH2D6Q7Z4S9 175 aa11.37□□□□□ -0.59
TFE3-201ENST00000315869 CNFNQ9BYD5 112 aa11.37□□□□□ -0.59
TFE3-201ENST00000315869 FLNAP21333 2647 aaKnown RBP11.37□□□□□ -0.59
TFE3-201ENST00000315869 A0A087WX48 190 aa11.37□□□□□ -0.59
TFE3-201ENST00000315869 IGHV7-4-1A0A0J9YVY3 117 aa11.37□□□□□ -0.59
TFE3-201ENST00000315869 NPFFO15130 113 aa11.37□□□□□ -0.59
TFE3-201ENST00000315869 ASIPP42127 132 aa11.37□□□□□ -0.59
TFE3-201ENST00000315869 SMAGPQ0VAQ4 97 aa11.37□□□□□ -0.59
TFE3-201ENST00000315869 UNQ9165/PRO28630Q6UXU0 137 aa11.37□□□□□ -0.59
TFE3-201ENST00000315869 ITPR3Q14573 2671 aa11.36□□□□□ -0.59
TFE3-201ENST00000315869 LOC107984156A0A0G2JMH3 177 aa11.36□□□□□ -0.59
TFE3-201ENST00000315869 CENPVL3A0A0U1RRI6 287 aa11.36□□□□□ -0.59
TFE3-201ENST00000315869 GNRH2O43555 120 aa11.36□□□□□ -0.59
TFE3-201ENST00000315869 SUMO2P61956 95 aaKnown RBP11.36□□□□□ -0.59
TFE3-201ENST00000315869 ARL17AQ8IVW1 177 aa11.36□□□□□ -0.59
TFE3-201ENST00000315869 NRACQ8N912 160 aa11.36□□□□□ -0.59
TFE3-201ENST00000315869 EBI3Q14213 229 aa11.36□□□□□ -0.59
TFE3-201ENST00000315869 ANXA2RQ3ZCQ2 193 aa11.36□□□□□ -0.59
TFE3-201ENST00000315869 TEP1Q99973 2627 aaKnown RBP11.36□□□□□ -0.59
TFE3-201ENST00000315869 GCN1Q92616 2671 aaKnown RBP11.36□□□□□ -0.59
TFE3-201ENST00000315869 TRBV7-1A0A0A6YYK4 115 aa11.35□□□□□ -0.59
TFE3-201ENST00000315869 H7C1H1 209 aa11.35□□□□□ -0.59
TFE3-201ENST00000315869 C12orf74Q32Q52 190 aa11.35□□□□□ -0.59
TFE3-201ENST00000315869 Q5PR19 223 aa11.35□□□□□ -0.59
TFE3-201ENST00000315869 FAM74A4Q5TZK3 123 aa11.35□□□□□ -0.59
TFE3-201ENST00000315869 C1orf122Q6ZSJ8 110 aa11.35□□□□□ -0.59
TFE3-201ENST00000315869 C20orf173Q96LM9 149 aa11.35□□□□□ -0.59
TFE3-201ENST00000315869 RBAKDNA6NC62 111 aa11.35□□□□□ -0.59
TFE3-201ENST00000315869 IGLL5B9A064 214 aa11.35□□□□□ -0.59
TFE3-201ENST00000315869 APOMO95445 188 aa11.35□□□□□ -0.59
TFE3-201ENST00000315869 HIGD1BQ9P298 99 aa11.35□□□□□ -0.59
TFE3-201ENST00000315869 TRAV21A0A0B4J279 112 aa11.34□□□□□ -0.59
TFE3-201ENST00000315869 F8VRH5 84 aa11.34□□□□□ -0.59
TFE3-201ENST00000315869 PLNP26678 52 aa11.34□□□□□ -0.59
TFE3-201ENST00000315869 C2orf66Q6UXQ4 117 aa11.34□□□□□ -0.59
TFE3-201ENST00000315869 ZNF815PA8K554 130 aa11.34□□□□□ -0.59
TFE3-201ENST00000315869 TGFAP01135 160 aa11.34□□□□□ -0.59
TFE3-201ENST00000315869 ATP5J2P56134 94 aa11.34□□□□□ -0.59
TFE3-201ENST00000315869 CCL19Q99731 98 aa11.34□□□□□ -0.59
TFE3-201ENST00000315869 IGLV2-18A0A075B6J9 118 aa11.33□□□□□ -0.6
TFE3-201ENST00000315869 TMEM238C9JI98 176 aa11.33□□□□□ -0.6
TFE3-201ENST00000315869 ORMDL2Q53FV1 153 aa11.33□□□□□ -0.6
TFE3-201ENST00000315869 PSMG4Q5JS54 123 aa11.33□□□□□ -0.6
TFE3-201ENST00000315869 ZMAT4Q9H898 229 aa11.33□□□□□ -0.6
TFE3-201ENST00000315869 MRPL16Q9NX20 251 aaKnown RBP11.33□□□□□ -0.6
TFE3-201ENST00000315869 A0A1B0GWB2 263 aa11.33□□□□□ -0.6
TFE3-201ENST00000315869 J3QR89 54 aa11.33□□□□□ -0.6
TFE3-201ENST00000315869 SRSF2Q01130 221 aaKnown RBP11.33□□□□□ -0.6
TFE3-201ENST00000315869 C9orf139Q6ZV77 190 aa11.33□□□□□ -0.6
TFE3-201ENST00000315869 DPH3P1Q9H4G8 78 aa11.33□□□□□ -0.6
TFE3-201ENST00000315869 A0A087WWL8 130 aa11.32□□□□□ -0.6
TFE3-201ENST00000315869 IGHV4-61A0A0C4DH41 118 aa11.32□□□□□ -0.6
TFE3-201ENST00000315869 DUX5Q96PT3 197 aa11.32□□□□□ -0.6
TFE3-201ENST00000315869 TSSC4Q9Y5U2 329 aaPredicted RBP11.32□□□□□ -0.6
TFE3-201ENST00000315869 C9orf47Q6ZRZ4 202 aa11.32□□□□□ -0.6
TFE3-201ENST00000315869 KLHL30-AS1Q8NEE0 82 aa11.32□□□□□ -0.6
TFE3-201ENST00000315869 PRADC1Q9BSG0 188 aa11.32□□□□□ -0.6
TFE3-201ENST00000315869 SLC25A16P16260 332 aa11.31□□□□□ -0.6
TFE3-201ENST00000315869 SAMD13Q5VXD3 122 aa11.31□□□□□ -0.6
TFE3-201ENST00000315869 C5orf56Q8N8D9 126 aa11.31□□□□□ -0.6
TFE3-201ENST00000315869 PRSS29PA6NIE9 313 aa11.31□□□□□ -0.6
TFE3-201ENST00000315869 LMO4P61968 165 aa11.31□□□□□ -0.6
TFE3-201ENST00000315869 SPOCK3Q9BQ16 436 aa11.31□□□□□ -0.6
TFE3-201ENST00000315869 JPT2Q9H910 190 aa11.31□□□□□ -0.6
TFE3-201ENST00000315869 PGPEP1Q9NXJ5 209 aa11.31□□□□□ -0.6
TFE3-201ENST00000315869 NACAE9PAV3 2078 aa11.31□□□□□ -0.6
TFE3-201ENST00000315869 GAGE13Q4V321 117 aa11.31□□□□□ -0.6
TFE3-201ENST00000315869 TMEM170BQ5T4T1 132 aa11.31□□□□□ -0.6
TFE3-201ENST00000315869 ZNF418Q8TF45 676 aaPredicted RBP11.31□□□□□ -0.6
TFE3-201ENST00000315869 RASL10AQ92737 203 aa11.31□□□□□ -0.6
TFE3-201ENST00000315869 MRAP2Q96G30 205 aa11.31□□□□□ -0.6
TFE3-201ENST00000315869 ZNF256Q9Y2P7 627 aaPredicted RBP11.31□□□□□ -0.6
TFE3-201ENST00000315869 MOB4Q9Y3A3 225 aa11.31□□□□□ -0.6
TFE3-201ENST00000315869 MYMXA0A1B0GTQ4 84 aa11.3□□□□□ -0.6
TFE3-201ENST00000315869 HTN1P15515 57 aa11.3□□□□□ -0.6
TFE3-201ENST00000315869 LINC00477Q96M19 166 aa11.3□□□□□ -0.6
TFE3-201ENST00000315869 IGHV4-30-2A0A087WSY4 118 aa11.3□□□□□ -0.6
TFE3-201ENST00000315869 HOXA3O43365 443 aaPredicted RBP11.3□□□□□ -0.6
TFE3-201ENST00000315869 HLA-DRB4P13762 266 aa11.3□□□□□ -0.6
TFE3-201ENST00000315869 FOXI2Q6ZQN5 318 aa11.3□□□□□ -0.6
TFE3-201ENST00000315869 TM2D2Q9BX73 214 aa11.3□□□□□ -0.6
TFE3-201ENST00000315869 HLA-DRB4X5D2U9 266 aa11.3□□□□□ -0.6
TFE3-201ENST00000315869 DUSP14O95147 198 aaKnown RBP11.29□□□□□ -0.6
TFE3-201ENST00000315869 FAM159AQ6UWV7 190 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms