RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 ATP6V0E1O15342 81 aa11.18□□□□□ -0.62
COL6A2-202ENST00000310645 PRTN3P24158 256 aa11.18□□□□□ -0.62
COL6A2-202ENST00000310645 TEN1Q86WV5 123 aa11.18□□□□□ -0.62
COL6A2-202ENST00000310645 LINC00527Q9UJ94 153 aa11.18□□□□□ -0.62
COL6A2-202ENST00000310645 RPL11P62913 178 aaKnown RBP11.17□□□□□ -0.62
COL6A2-202ENST00000310645 NDUFA11Q86Y39 141 aa11.17□□□□□ -0.62
COL6A2-202ENST00000310645 ATP6V0E2Q8NHE4 81 aa11.17□□□□□ -0.62
COL6A2-202ENST00000310645 ANXA2RQ3ZCQ2 193 aa11.17□□□□□ -0.62
COL6A2-202ENST00000310645 ANAPC13Q9BS18 74 aa11.17□□□□□ -0.62
COL6A2-202ENST00000310645 DPH3P1Q9H4G8 78 aa11.17□□□□□ -0.62
COL6A2-202ENST00000310645 LINC01619G3V211 115 aa11.16□□□□□ -0.62
COL6A2-202ENST00000310645 GNRH2O43555 120 aa11.16□□□□□ -0.62
COL6A2-202ENST00000310645 CD7P09564 240 aa11.16□□□□□ -0.62
COL6A2-202ENST00000310645 SVIPQ8NHG7 77 aa11.16□□□□□ -0.62
COL6A2-202ENST00000310645 CCDC140Q96MF4 163 aa11.16□□□□□ -0.62
COL6A2-202ENST00000310645 MUC6Q6W4X9 2439 aa11.16□□□□□ -0.62
COL6A2-202ENST00000310645 ANKRD29Q8N6D5 301 aa11.16□□□□□ -0.62
COL6A2-202ENST00000310645 TIMD4Q96H15 378 aa11.16□□□□□ -0.62
COL6A2-202ENST00000310645 RNASE4P34096 147 aaKnown RBP11.16□□□□□ -0.62
COL6A2-202ENST00000310645 RPL39P62891 51 aaKnown RBP11.16□□□□□ -0.62
COL6A2-202ENST00000310645 Q8N9W7 124 aa11.16□□□□□ -0.62
COL6A2-202ENST00000310645 SS18L2Q9UHA2 77 aa11.16□□□□□ -0.62
COL6A2-202ENST00000310645 ODF3BA8MYP8 253 aa11.15□□□□□ -0.62
COL6A2-202ENST00000310645 LYRM7Q5U5X0 104 aa11.15□□□□□ -0.62
COL6A2-202ENST00000310645 TP53TG1Q9Y2A0 90 aa11.15□□□□□ -0.62
COL6A2-202ENST00000310645 ASIPP42127 132 aa11.15□□□□□ -0.62
COL6A2-202ENST00000310645 UBE2D3P61077 147 aa11.15□□□□□ -0.62
COL6A2-202ENST00000310645 UBE2D2P62837 147 aa11.15□□□□□ -0.62
COL6A2-202ENST00000310645 C20orf173Q96LM9 149 aa11.15□□□□□ -0.62
COL6A2-202ENST00000310645 IGHV4-4A0A075B6R2 117 aa11.15□□□□□ -0.63
COL6A2-202ENST00000310645 A0A0J9YY99 117 aa11.15□□□□□ -0.63
COL6A2-202ENST00000310645 F6UB75 175 aa11.15□□□□□ -0.63
COL6A2-202ENST00000310645 CFC1BP0CG36 223 aa11.15□□□□□ -0.63
COL6A2-202ENST00000310645 CFC1P0CG37 223 aa11.15□□□□□ -0.63
COL6A2-202ENST00000310645 COX6B1P14854 86 aa11.15□□□□□ -0.63
COL6A2-202ENST00000310645 HERVK_113P61574 105 aa11.15□□□□□ -0.63
COL6A2-202ENST00000310645 C9orf47Q6ZRZ4 202 aa11.15□□□□□ -0.63
COL6A2-202ENST00000310645 F5H697 171 aa11.14□□□□□ -0.63
COL6A2-202ENST00000310645 ZNF688P0C7X2 276 aa11.14□□□□□ -0.63
COL6A2-202ENST00000310645 IGHV3-64A0A075B6Q5 118 aa11.13□□□□□ -0.63
COL6A2-202ENST00000310645 C9JAW5 83 aa11.13□□□□□ -0.63
COL6A2-202ENST00000310645 CRYGDP07320 174 aa11.13□□□□□ -0.63
COL6A2-202ENST00000310645 FAM110DQ8TAY7 271 aaPredicted RBP11.13□□□□□ -0.63
COL6A2-202ENST00000310645 TSPEAR-AS2P59090 65 aa11.13□□□□□ -0.63
COL6A2-202ENST00000310645 TRPT1Q86TN4 253 aaKnown RBP11.13□□□□□ -0.63
COL6A2-202ENST00000310645 JPT2Q9H910 190 aa11.13□□□□□ -0.63
COL6A2-202ENST00000310645 Q8N6K4 173 aa11.13□□□□□ -0.63
COL6A2-202ENST00000310645 CRIP2P52943 208 aaPredicted RBP11.12□□□□□ -0.63
COL6A2-202ENST00000310645 TEX29Q8N6K0 151 aa11.12□□□□□ -0.63
COL6A2-202ENST00000310645 ZFAND6Q6FIF0 208 aa11.12□□□□□ -0.63
COL6A2-202ENST00000310645 OR10J6PQ8NGY7 276 aa11.12□□□□□ -0.63
COL6A2-202ENST00000310645 BEX4Q9NWD9 120 aaPredicted RBP11.12□□□□□ -0.63
COL6A2-202ENST00000310645 TRAV21A0A0B4J279 112 aa11.12□□□□□ -0.63
COL6A2-202ENST00000310645 M0R1W7 72 aa11.12□□□□□ -0.63
COL6A2-202ENST00000310645 EEF1AKMT3Q96AZ1 226 aa11.12□□□□□ -0.63
COL6A2-202ENST00000310645 ERG28Q9UKR5 140 aa11.12□□□□□ -0.63
COL6A2-202ENST00000310645 A0A087WWL8 130 aa11.11□□□□□ -0.63
COL6A2-202ENST00000310645 TSHBP01222 138 aa11.11□□□□□ -0.63
COL6A2-202ENST00000310645 Q1RN00 199 aa11.11□□□□□ -0.63
COL6A2-202ENST00000310645 C10orf126Q8N4M7 172 aa11.11□□□□□ -0.63
COL6A2-202ENST00000310645 PRO1854Q9UHT4 67 aa11.11□□□□□ -0.63
COL6A2-202ENST00000310645 B5MCH6 92 aa11.11□□□□□ -0.63
COL6A2-202ENST00000310645 RNF223E7ERA6 249 aa11.11□□□□□ -0.63
COL6A2-202ENST00000310645 IGLV4-69A0A075B6H9 119 aa11.1□□□□□ -0.63
COL6A2-202ENST00000310645 ZFAND2AQ8N6M9 145 aa11.1□□□□□ -0.63
COL6A2-202ENST00000310645 Q8NA96 180 aa11.1□□□□□ -0.63
COL6A2-202ENST00000310645 BSNQ9UPA5 3926 aa11.1□□□□□ -0.63
COL6A2-202ENST00000310645 TRBV20-1A0A075B6N2 111 aa11.1□□□□□ -0.63
COL6A2-202ENST00000310645 TRAV2A0A0B4J234 112 aa11.1□□□□□ -0.63
COL6A2-202ENST00000310645 SLC25A20O43772 301 aa11.1□□□□□ -0.63
COL6A2-202ENST00000310645 IGHV3-30P01768 117 aa11.1□□□□□ -0.63
COL6A2-202ENST00000310645 IGHV3-30-5P0DP03 117 aa11.1□□□□□ -0.63
COL6A2-202ENST00000310645 ZFP36P26651 326 aaKnown RBP11.1□□□□□ -0.63
COL6A2-202ENST00000310645 OPRPNQ99935 248 aaPredicted RBP11.1□□□□□ -0.63
COL6A2-202ENST00000310645 SORL1Q92673 2214 aa11.09□□□□□ -0.63
COL6A2-202ENST00000310645 MUC4Q99102 2169 aa11.09□□□□□ -0.63
COL6A2-202ENST00000310645 LGALS3P17931 250 aaKnown RBP11.09□□□□□ -0.63
COL6A2-202ENST00000310645 PMVKQ15126 192 aa11.09□□□□□ -0.63
COL6A2-202ENST00000310645 FAM74A4Q5TZK3 123 aa11.09□□□□□ -0.63
COL6A2-202ENST00000310645 TMEM219Q86XT9 240 aa11.09□□□□□ -0.63
COL6A2-202ENST00000310645 ZNF256Q9Y2P7 627 aaPredicted RBP11.09□□□□□ -0.63
COL6A2-202ENST00000310645 A4D1N5 150 aa11.09□□□□□ -0.63
COL6A2-202ENST00000310645 SRD5A1P18405 259 aa11.09□□□□□ -0.63
COL6A2-202ENST00000310645 GPHB5Q86YW7 130 aa11.09□□□□□ -0.63
COL6A2-202ENST00000310645 IGHV4-39P01824 125 aa11.08□□□□□ -0.64
COL6A2-202ENST00000310645 ATRXP46100 2492 aa11.08□□□□□ -0.64
COL6A2-202ENST00000310645 J3QQQ9 107 aa11.07□□□□□ -0.64
COL6A2-202ENST00000310645 UNQ9165/PRO28630Q6UXU0 137 aa11.07□□□□□ -0.64
COL6A2-202ENST00000310645 SLC25A29Q8N8R3 303 aa11.07□□□□□ -0.64
COL6A2-202ENST00000310645 ZNRF2Q8NHG8 242 aa11.07□□□□□ -0.64
COL6A2-202ENST00000310645 MRPL53Q96EL3 112 aaKnown RBP11.07□□□□□ -0.64
COL6A2-202ENST00000310645 LINC00477Q96M19 166 aa11.07□□□□□ -0.64
COL6A2-202ENST00000310645 EBI3Q14213 229 aa11.07□□□□□ -0.64
COL6A2-202ENST00000310645 C1orf122Q6ZSJ8 110 aa11.07□□□□□ -0.64
COL6A2-202ENST00000310645 C9orf139Q6ZV77 190 aa11.07□□□□□ -0.64
COL6A2-202ENST00000310645 NTN5Q8WTR8 489 aaPredicted RBP11.07□□□□□ -0.64
COL6A2-202ENST00000310645 IGHV3OR16-10A0A075B7F0 116 aa11.06□□□□□ -0.64
COL6A2-202ENST00000310645 TRBV12-3P01733 135 aa11.06□□□□□ -0.64
COL6A2-202ENST00000310645 RNASE3P12724 160 aaKnown RBP11.06□□□□□ -0.64
COL6A2-202ENST00000310645 IGHV3-11P01762 117 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms