RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 ZNF138P52744 262 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 TMEM258P61165 79 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 PIP4P2Q8N4L2 257 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 TRGV11A0A075B6L2 103 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 CDSNQ15517 529 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 FAM120AOSQ5T036 256 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 TEN1Q86WV5 123 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 RNF152Q8N8N0 203 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 FXYD5Q96DB9 178 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 DNAH7Q8WXX0 4024 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 A0A1B0GUT8 65 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 M0R3E3 92 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 IGHG4P01861 327 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 PFN2P35080 140 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 KLK9Q2XQG4 91 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 C4orf48Q5BLP8 95 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 SPATA12Q7Z6I5 190 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 ZNF295-AS1Q8N0V1 137 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 PYGO2Q9BRQ0 406 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 SCRT1Q9BWW7 348 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 KLK9Q9UKQ9 250 aa4.68□□□□□ -1.66
SEC22A-201ENST00000309934 IGHV7-4-1A0A0J9YVY3 117 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 LGALS9O00182 355 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 RHODO00212 210 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 C6orf226Q5I0X4 101 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 YLPM1P49750 1951 aaKnown RBP4.67□□□□□ -1.66
SEC22A-201ENST00000309934 IGHV4-38-2P0DP08 117 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 PYYP10082 97 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 Q86TA4 180 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 C11orf44Q8N8P7 122 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 CHAC1Q9BUX1 264 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 JPT2Q9H910 190 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 CEND1Q8N111 149 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 OCC1Q8TAD7 63 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 ABCA2Q9BZC7 2435 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 TANC2Q9HCD6 1990 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 IGKV1-17P01599 117 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 CD7P09564 240 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 CTRLP40313 264 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 SYNJ2BPP57105 145 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 C4orf26Q17RF5 130 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 C3orf22Q8N5N4 141 aa4.67□□□□□ -1.66
SEC22A-201ENST00000309934 RANBP2P49792 3224 aaKnown RBP4.66□□□□□ -1.66
SEC22A-201ENST00000309934 PRB4P10163 310 aaPredicted RBP4.66□□□□□ -1.66
SEC22A-201ENST00000309934 GP9P14770 177 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 DLX1P56177 255 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 SPANXN1Q5VSR9 72 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 FANCD2OSQ96PS1 177 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 RHPN1-AS1Q9BWJ2 59 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 ZFYVE26Q68DK2 2539 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 KNCNA6PVL3 124 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 IGHV3-48P01763 117 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 APOHP02749 345 aaPredicted RBP4.66□□□□□ -1.66
SEC22A-201ENST00000309934 CTSGP08311 255 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 TWIST1Q15672 202 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 C4orf3Q8WVX3 66 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 CSMD3Q7Z407 3707 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 RTTNQ86VV8 2226 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 A0A087WX48 190 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 INSL3P51460 131 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 C2orf82Q6UX34 121 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 NUP35Q8NFH5 326 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 ODF3Q96PU9 254 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 PSMG3-AS1Q96PY0 264 aa4.66□□□□□ -1.66
SEC22A-201ENST00000309934 CRLF1O75462 422 aa4.65□□□□□ -1.66
SEC22A-201ENST00000309934 TIRAPP58753 221 aa4.65□□□□□ -1.66
SEC22A-201ENST00000309934 TMEM170BQ5T4T1 132 aa4.65□□□□□ -1.66
SEC22A-201ENST00000309934 C1orf229Q6ZS94 237 aaPredicted RBP4.65□□□□□ -1.66
SEC22A-201ENST00000309934 ATP6V0E2Q8NHE4 81 aa4.65□□□□□ -1.66
SEC22A-201ENST00000309934 MYOZ3Q8TDC0 251 aa4.65□□□□□ -1.66
SEC22A-201ENST00000309934 CHCHD1Q96BP2 118 aaKnown RBP4.65□□□□□ -1.66
SEC22A-201ENST00000309934 SHANK1Q9Y566 2161 aa4.65□□□□□ -1.66
SEC22A-201ENST00000309934 LTAP01374 205 aa4.65□□□□□ -1.66
SEC22A-201ENST00000309934 IGHV3-23P01764 117 aa4.65□□□□□ -1.66
SEC22A-201ENST00000309934 IGHV4-59P01825 116 aa4.65□□□□□ -1.66
SEC22A-201ENST00000309934 MYCNOSP40205 109 aa4.65□□□□□ -1.66
SEC22A-201ENST00000309934 UFSP1Q6NVU6 142 aa4.65□□□□□ -1.66
SEC22A-201ENST00000309934 NTN5Q8WTR8 489 aaPredicted RBP4.65□□□□□ -1.66
SEC22A-201ENST00000309934 FAM167A-AS1Q96KT0 104 aa4.65□□□□□ -1.66
SEC22A-201ENST00000309934 IGLL5B9A064 214 aa4.65□□□□□ -1.67
SEC22A-201ENST00000309934 IGHV3-11P01762 117 aa4.65□□□□□ -1.67
SEC22A-201ENST00000309934 IL17DQ8TAD2 202 aa4.65□□□□□ -1.67
SEC22A-201ENST00000309934 WIPF2Q8TF74 440 aaPredicted RBP4.65□□□□□ -1.67
SEC22A-201ENST00000309934 RITA1Q96K30 269 aa4.65□□□□□ -1.67
SEC22A-201ENST00000309934 TMEM243Q9BU79 118 aa4.65□□□□□ -1.67
SEC22A-201ENST00000309934 PHLDA3Q9Y5J5 127 aa4.65□□□□□ -1.67
SEC22A-201ENST00000309934 ANKHD1Q8IWZ3 2542 aaKnown RBP4.65□□□□□ -1.67
SEC22A-201ENST00000309934 IGKV1D-37A0A075B6S9 117 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 hADV29S1A0JD25 119 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 G3V318 75 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 H3BMM0 161 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 SLC25A20O43772 301 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 MED14OSP0DP75 135 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 LGALS3P17931 250 aaKnown RBP4.64□□□□□ -1.67
SEC22A-201ENST00000309934 PRB3Q04118 309 aaPredicted RBP4.64□□□□□ -1.67
SEC22A-201ENST00000309934 MLANAQ16655 118 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 UBE2WQ96B02 151 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 CUBNO60494 3623 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 HIST1H4AP62805 103 aaKnown RBP4.64□□□□□ -1.67
SEC22A-201ENST00000309934 PAPPA-AS1Q5QFB9 102 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms