RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 TMEM213A2RRL7 107 aa9.6□□□□□ -0.87
PCF11-201ENST00000298281 Q8TCH9 128 aa9.6□□□□□ -0.87
PCF11-201ENST00000298281 H3BMG7 143 aa9.6□□□□□ -0.87
PCF11-201ENST00000298281 NAV3Q8IVL0 2385 aa9.6□□□□□ -0.87
PCF11-201ENST00000298281 IGKV1-16P04430 117 aa9.6□□□□□ -0.87
PCF11-201ENST00000298281 NPSP0C0P6 89 aa9.6□□□□□ -0.87
PCF11-201ENST00000298281 Q8N8P6 123 aa9.6□□□□□ -0.87
PCF11-201ENST00000298281 TRBV12-3P01733 135 aa9.6□□□□□ -0.87
PCF11-201ENST00000298281 PLA2G1BP04054 148 aaKnown RBP9.6□□□□□ -0.87
PCF11-201ENST00000298281 TEX36Q5VZQ5 186 aa9.6□□□□□ -0.87
PCF11-201ENST00000298281 FAM110AQ9BQ89 295 aa9.6□□□□□ -0.87
PCF11-201ENST00000298281 PLXNA2O75051 1894 aa9.6□□□□□ -0.87
PCF11-201ENST00000298281 TAX1BP3O14907 124 aa9.59□□□□□ -0.87
PCF11-201ENST00000298281 GP9P14770 177 aa9.59□□□□□ -0.87
PCF11-201ENST00000298281 HGFACQ04756 655 aa9.59□□□□□ -0.87
PCF11-201ENST00000298281 IL17DQ8TAD2 202 aa9.59□□□□□ -0.87
PCF11-201ENST00000298281 OPRPNQ99935 248 aaPredicted RBP9.59□□□□□ -0.87
PCF11-201ENST00000298281 KLF2Q9Y5W3 355 aaPredicted RBP9.59□□□□□ -0.87
PCF11-201ENST00000298281 IGKV2-24A0A0C4DH68 120 aa9.59□□□□□ -0.87
PCF11-201ENST00000298281 IGLV3-9A0A075B6K5 115 aa9.59□□□□□ -0.87
PCF11-201ENST00000298281 PRR20EP86478 221 aa9.59□□□□□ -0.87
PCF11-201ENST00000298281 PRR20CP86479 221 aa9.59□□□□□ -0.87
PCF11-201ENST00000298281 PRR20DP86480 221 aa9.59□□□□□ -0.87
PCF11-201ENST00000298281 PRR20BP86481 221 aa9.59□□□□□ -0.87
PCF11-201ENST00000298281 PRR20AP86496 221 aa9.59□□□□□ -0.87
PCF11-201ENST00000298281 TRBV10-2A0A0K0K1G8 114 aa9.58□□□□□ -0.88
PCF11-201ENST00000298281 K7ENP7 123 aa9.58□□□□□ -0.88
PCF11-201ENST00000298281 NDUFA4L2Q9NRX3 87 aa9.58□□□□□ -0.88
PCF11-201ENST00000298281 IGHV4-30-4P0DP06 118 aa9.58□□□□□ -0.88
PCF11-201ENST00000298281 IGHV4-31P0DP07 118 aa9.58□□□□□ -0.88
PCF11-201ENST00000298281 IGKV1-6A0A0C4DH72 117 aa9.58□□□□□ -0.88
PCF11-201ENST00000298281 G3V318 75 aa9.58□□□□□ -0.88
PCF11-201ENST00000298281 CFPP27918 469 aa9.58□□□□□ -0.88
PCF11-201ENST00000298281 SH2D6Q7Z4S9 175 aa9.58□□□□□ -0.88
PCF11-201ENST00000298281 LINC00311Q8N616 119 aa9.58□□□□□ -0.88
PCF11-201ENST00000298281 IGHV2-70DA0A0C4DH43 119 aa9.58□□□□□ -0.88
PCF11-201ENST00000298281 RETNQ9HD89 108 aa9.58□□□□□ -0.88
PCF11-201ENST00000298281 DEFB136Q30KP8 78 aa9.57□□□□□ -0.88
PCF11-201ENST00000298281 TMEM14CQ9P0S9 112 aa9.57□□□□□ -0.88
PCF11-201ENST00000298281 TRBV19A0A075B6N1 114 aa9.57□□□□□ -0.88
PCF11-201ENST00000298281 C9orf118A6NHY6 69 aa9.57□□□□□ -0.88
PCF11-201ENST00000298281 LINC01620Q4KN68 170 aa9.57□□□□□ -0.88
PCF11-201ENST00000298281 ZNF833PQ6ZTB9 187 aa9.57□□□□□ -0.88
PCF11-201ENST00000298281 PCP2Q8IVA1 136 aa9.57□□□□□ -0.88
PCF11-201ENST00000298281 K7ERJ3 54 aa9.57□□□□□ -0.88
PCF11-201ENST00000298281 TMEM61Q8N0U2 210 aa9.57□□□□□ -0.88
PCF11-201ENST00000298281 APRG1Q8IVJ8 170 aa9.56□□□□□ -0.88
PCF11-201ENST00000298281 LINC00479Q96M42 142 aa9.56□□□□□ -0.88
PCF11-201ENST00000298281 WFDC10BQ8IUB3 73 aa9.56□□□□□ -0.88
PCF11-201ENST00000298281 ZNF106Q9H2Y7 1883 aaKnown RBP9.56□□□□□ -0.88
PCF11-201ENST00000298281 A0A087WZ39 114 aa9.56□□□□□ -0.88
PCF11-201ENST00000298281 J3QQQ9 107 aa9.56□□□□□ -0.88
PCF11-201ENST00000298281 NDUFA1O15239 70 aa9.56□□□□□ -0.88
PCF11-201ENST00000298281 IGFL3Q6UXB1 125 aa9.56□□□□□ -0.88
PCF11-201ENST00000298281 GPR179Q6PRD1 2367 aa9.56□□□□□ -0.88
PCF11-201ENST00000298281 PLXNA3P51805 1871 aa9.56□□□□□ -0.88
PCF11-201ENST00000298281 ELANEP08246 267 aa9.56□□□□□ -0.88
PCF11-201ENST00000298281 FAM231DQ6ZW35 169 aa9.56□□□□□ -0.88
PCF11-201ENST00000298281 HHLA3Q9XRX5 114 aa9.56□□□□□ -0.88
PCF11-201ENST00000298281 SIPA1L1O43166 1804 aa9.56□□□□□ -0.88
PCF11-201ENST00000298281 X6R8D5 127 aa9.55□□□□□ -0.88
PCF11-201ENST00000298281 FAM208BQ5VWN6 2430 aa9.55□□□□□ -0.88
PCF11-201ENST00000298281 FAM236DA0A1B0GTK5 79 aa9.55□□□□□ -0.88
PCF11-201ENST00000298281 B5MCH6 92 aa9.55□□□□□ -0.88
PCF11-201ENST00000298281 FAM236CP0DP71 79 aa9.55□□□□□ -0.88
PCF11-201ENST00000298281 MRPL51Q4U2R6 128 aaKnown RBP9.55□□□□□ -0.88
PCF11-201ENST00000298281 ATP6V0E2Q8NHE4 81 aa9.55□□□□□ -0.88
PCF11-201ENST00000298281 TEX49A0A1B0GTD5 131 aa9.55□□□□□ -0.88
PCF11-201ENST00000298281 H3BUA1 57 aa9.55□□□□□ -0.88
PCF11-201ENST00000298281 C14orf177Q52M58 125 aa9.55□□□□□ -0.88
PCF11-201ENST00000298281 REG4Q9BYZ8 158 aa9.55□□□□□ -0.88
PCF11-201ENST00000298281 SND1-IT1Q9HBX3 110 aa9.55□□□□□ -0.88
PCF11-201ENST00000298281 K7EMI3 77 aa9.55□□□□□ -0.88
PCF11-201ENST00000298281 FOXI1Q12951 378 aa9.55□□□□□ -0.88
PCF11-201ENST00000298281 C7orf33Q8WU49 177 aa9.55□□□□□ -0.88
PCF11-201ENST00000298281 C20orf144Q9BQM9 153 aa9.55□□□□□ -0.88
PCF11-201ENST00000298281 JMJD7-PLA2G4BH0Y9G9 81 aa9.55□□□□□ -0.88
PCF11-201ENST00000298281 HRCT1Q6UXD1 115 aa9.55□□□□□ -0.88
PCF11-201ENST00000298281 C16orf74Q96GX8 76 aa9.55□□□□□ -0.88
PCF11-201ENST00000298281 Q6ZRM9 215 aa9.54□□□□□ -0.88
PCF11-201ENST00000298281 WDR86Q86TI4 376 aa9.54□□□□□ -0.88
PCF11-201ENST00000298281 A0A0U1RQV1 116 aa9.54□□□□□ -0.88
PCF11-201ENST00000298281 IGHV2-70P01814 119 aa9.54□□□□□ -0.88
PCF11-201ENST00000298281 DIRC1Q969H9 104 aa9.54□□□□□ -0.88
PCF11-201ENST00000298281 DUX4L9Q6RFH8 374 aaPredicted RBP9.54□□□□□ -0.88
PCF11-201ENST00000298281 PYY3Q5JQD4 70 aa9.54□□□□□ -0.88
PCF11-201ENST00000298281 C18orf32Q8TCD1 76 aa9.54□□□□□ -0.88
PCF11-201ENST00000298281 FNDC1Q4ZHG4 1894 aaPredicted RBP9.54□□□□□ -0.88
PCF11-201ENST00000298281 IGHV4-30-2A0A087WSY4 118 aa9.54□□□□□ -0.88
PCF11-201ENST00000298281 A0A0B4J2C4 111 aa9.54□□□□□ -0.88
PCF11-201ENST00000298281 PRR25Q96S07 402 aa9.54□□□□□ -0.88
PCF11-201ENST00000298281 SIGLEC8Q9NYZ4 499 aa9.54□□□□□ -0.88
PCF11-201ENST00000298281 LGALS9BQ3B8N2 356 aa9.53□□□□□ -0.88
PCF11-201ENST00000298281 LGALS9CQ6DKI2 356 aa9.53□□□□□ -0.88
PCF11-201ENST00000298281 C20orf78Q9BR46 151 aa9.53□□□□□ -0.88
PCF11-201ENST00000298281 PYGO2Q9BRQ0 406 aa9.53□□□□□ -0.88
PCF11-201ENST00000298281 UPK3BQ9BT76 320 aa9.53□□□□□ -0.88
PCF11-201ENST00000298281 NLRC5Q86WI3 1866 aa9.53□□□□□ -0.88
PCF11-201ENST00000298281 A0A0G2JRQ6 117 aa9.53□□□□□ -0.88
PCF11-201ENST00000298281 Q8NFD4 153 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms