RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 GTSF1LQ9H1H1 148 aa13.32□□□□□ -0.28
CDCP1-201ENST00000296129 FGF6P10767 208 aa13.32□□□□□ -0.28
CDCP1-201ENST00000296129 C11orf1Q9H5F2 150 aa13.31□□□□□ -0.28
CDCP1-201ENST00000296129 H3BMM0 161 aa13.31□□□□□ -0.28
CDCP1-201ENST00000296129 Q6ZQT7 251 aa13.31□□□□□ -0.28
CDCP1-201ENST00000296129 UBE2WQ96B02 151 aa13.31□□□□□ -0.28
CDCP1-201ENST00000296129 C2orf70A6NJV1 201 aa13.31□□□□□ -0.28
CDCP1-201ENST00000296129 K7EMI3 77 aa13.31□□□□□ -0.28
CDCP1-201ENST00000296129 XCL1P47992 114 aa13.3□□□□□ -0.28
CDCP1-201ENST00000296129 GTSF1Q8WW33 167 aa13.3□□□□□ -0.28
CDCP1-201ENST00000296129 CDPF1Q6NVV7 123 aa13.3□□□□□ -0.28
CDCP1-201ENST00000296129 Q6ZPA2 131 aa13.3□□□□□ -0.28
CDCP1-201ENST00000296129 CDK2AP2O75956 126 aa13.3□□□□□ -0.28
CDCP1-201ENST00000296129 TRBV20-1A0A075B6N2 111 aa13.3□□□□□ -0.28
CDCP1-201ENST00000296129 UTF1Q5T230 341 aa13.3□□□□□ -0.28
CDCP1-201ENST00000296129 C16orf74Q96GX8 76 aa13.3□□□□□ -0.28
CDCP1-201ENST00000296129 PRORYQ9H606 182 aa13.3□□□□□ -0.28
CDCP1-201ENST00000296129 PRO1854Q9UHT4 67 aa13.29□□□□□ -0.28
CDCP1-201ENST00000296129 IGHG2P01859 326 aa13.29□□□□□ -0.28
CDCP1-201ENST00000296129 TAL2Q16559 108 aa13.29□□□□□ -0.28
CDCP1-201ENST00000296129 RNF152Q8N8N0 203 aa13.29□□□□□ -0.28
CDCP1-201ENST00000296129 CRIP3Q6Q6R5 217 aa13.29□□□□□ -0.28
CDCP1-201ENST00000296129 C19orf84I3L1E1 186 aa13.29□□□□□ -0.28
CDCP1-201ENST00000296129 NUPR1O60356 82 aa13.29□□□□□ -0.28
CDCP1-201ENST00000296129 C22orf34Q6ZV56 151 aa13.29□□□□□ -0.28
CDCP1-201ENST00000296129 MUC22E2RYF6 1773 aaPredicted RBP13.28□□□□□ -0.28
CDCP1-201ENST00000296129 TRBV12-3P01733 135 aa13.28□□□□□ -0.28
CDCP1-201ENST00000296129 C9orf47Q6ZRZ4 202 aa13.28□□□□□ -0.28
CDCP1-201ENST00000296129 K7EQD1 137 aa13.28□□□□□ -0.28
CDCP1-201ENST00000296129 SIVA1O15304 175 aa13.28□□□□□ -0.28
CDCP1-201ENST00000296129 DEFB1P60022 68 aa13.28□□□□□ -0.28
CDCP1-201ENST00000296129 ZMAT4Q9H898 229 aa13.28□□□□□ -0.28
CDCP1-201ENST00000296129 ZNF48Q96MX3 618 aaPredicted RBP13.28□□□□□ -0.28
CDCP1-201ENST00000296129 K7EP34 96 aa13.27□□□□□ -0.28
CDCP1-201ENST00000296129 SPTAN1Q13813 2472 aaKnown RBP13.27□□□□□ -0.28
CDCP1-201ENST00000296129 K7EMT4 169 aa13.27□□□□□ -0.29
CDCP1-201ENST00000296129 LINC00173Q6ZV60 143 aa13.27□□□□□ -0.29
CDCP1-201ENST00000296129 RMI2Q96E14 147 aa13.27□□□□□ -0.29
CDCP1-201ENST00000296129 P0C879 139 aa13.27□□□□□ -0.29
CDCP1-201ENST00000296129 PCP2Q8IVA1 136 aa13.27□□□□□ -0.29
CDCP1-201ENST00000296129 Q8N1Y9 231 aa13.27□□□□□ -0.29
CDCP1-201ENST00000296129 FANCD2OSQ96PS1 177 aa13.27□□□□□ -0.29
CDCP1-201ENST00000296129 SCRT2Q9NQ03 307 aa13.27□□□□□ -0.29
CDCP1-201ENST00000296129 NUP210LQ5VU65 1888 aa13.26□□□□□ -0.29
CDCP1-201ENST00000296129 A0A1W2PPM0 123 aa13.26□□□□□ -0.29
CDCP1-201ENST00000296129 A6NDX4 124 aa13.26□□□□□ -0.29
CDCP1-201ENST00000296129 C4orf3Q8WVX3 66 aa13.26□□□□□ -0.29
CDCP1-201ENST00000296129 UNQ9165/PRO28630Q6UXU0 137 aa13.26□□□□□ -0.29
CDCP1-201ENST00000296129 PIFOQ8TCI5 191 aa13.26□□□□□ -0.29
CDCP1-201ENST00000296129 GPHB5Q86YW7 130 aa13.26□□□□□ -0.29
CDCP1-201ENST00000296129 PCDH15Q96QU1 1955 aa13.25□□□□□ -0.29
CDCP1-201ENST00000296129 SOCS3O14543 225 aa13.25□□□□□ -0.29
CDCP1-201ENST00000296129 ODF3BA8MYP8 253 aa13.25□□□□□ -0.29
CDCP1-201ENST00000296129 ZFP2Q6ZN57 461 aa13.25□□□□□ -0.29
CDCP1-201ENST00000296129 SPANXA1Q9NS26 97 aa13.25□□□□□ -0.29
CDCP1-201ENST00000296129 TRAV13-2A0A0B4J235 113 aa13.25□□□□□ -0.29
CDCP1-201ENST00000296129 GYPEP15421 78 aa13.25□□□□□ -0.29
CDCP1-201ENST00000296129 BRWD1-AS2P59051 145 aa13.25□□□□□ -0.29
CDCP1-201ENST00000296129 IGKV2D-24A0A075B6R9 120 aa13.24□□□□□ -0.29
CDCP1-201ENST00000296129 IGKV1D-37A0A075B6S9 117 aa13.24□□□□□ -0.29
CDCP1-201ENST00000296129 Q9H8V8 135 aa13.24□□□□□ -0.29
CDCP1-201ENST00000296129 C1orf229Q6ZS94 237 aaPredicted RBP13.24□□□□□ -0.29
CDCP1-201ENST00000296129 NPSP0C0P6 89 aa13.24□□□□□ -0.29
CDCP1-201ENST00000296129 COA6Q5JTJ3 125 aaKnown RBP13.23□□□□□ -0.29
CDCP1-201ENST00000296129 LINC00574Q9H8X3 128 aa13.23□□□□□ -0.29
CDCP1-201ENST00000296129 TMEM89A2RUT3 159 aa13.23□□□□□ -0.29
CDCP1-201ENST00000296129 CGB3P0DN86 165 aa13.23□□□□□ -0.29
CDCP1-201ENST00000296129 CGB7P0DN87 165 aa13.23□□□□□ -0.29
CDCP1-201ENST00000296129 C12orf74Q32Q52 190 aa13.23□□□□□ -0.29
CDCP1-201ENST00000296129 PROP1O75360 226 aa13.23□□□□□ -0.29
CDCP1-201ENST00000296129 LMO4P61968 165 aa13.23□□□□□ -0.29
CDCP1-201ENST00000296129 PLA2G5P39877 138 aa13.23□□□□□ -0.29
CDCP1-201ENST00000296129 F8W1H4 67 aa13.23□□□□□ -0.29
CDCP1-201ENST00000296129 SLC25A29Q8N8R3 303 aa13.22□□□□□ -0.29
CDCP1-201ENST00000296129 INAFM2P0DMQ5 153 aa13.22□□□□□ -0.29
CDCP1-201ENST00000296129 SHANK1Q9Y566 2161 aa13.22□□□□□ -0.29
CDCP1-201ENST00000296129 ZNF503Q96F45 646 aa13.22□□□□□ -0.29
CDCP1-201ENST00000296129 DYSFO75923 2080 aa13.22□□□□□ -0.29
CDCP1-201ENST00000296129 EDA2RQ9HAV5 297 aa13.21□□□□□ -0.29
CDCP1-201ENST00000296129 LINC01548A6NM66 108 aa13.21□□□□□ -0.29
CDCP1-201ENST00000296129 CRLF1O75462 422 aa13.21□□□□□ -0.29
CDCP1-201ENST00000296129 C5orf38Q86SI9 138 aa13.21□□□□□ -0.29
CDCP1-201ENST00000296129 CCDC140Q96MF4 163 aa13.21□□□□□ -0.29
CDCP1-201ENST00000296129 CITED2Q99967 270 aaPredicted RBP13.21□□□□□ -0.29
CDCP1-201ENST00000296129 ETDBQ3ZM63 59 aa13.21□□□□□ -0.3
CDCP1-201ENST00000296129 PPDPFLQ8WWR9 84 aa13.21□□□□□ -0.3
CDCP1-201ENST00000296129 CARD19Q96LW7 228 aa13.21□□□□□ -0.3
CDCP1-201ENST00000296129 H3BMG7 143 aa13.21□□□□□ -0.3
CDCP1-201ENST00000296129 ATP6V0E2Q8NHE4 81 aa13.21□□□□□ -0.3
CDCP1-201ENST00000296129 TMEM126AQ9H061 195 aa13.21□□□□□ -0.3
CDCP1-201ENST00000296129 Q9HAA7 133 aa13.2□□□□□ -0.3
CDCP1-201ENST00000296129 DOPEY2Q9Y3R5 2298 aa13.2□□□□□ -0.3
CDCP1-201ENST00000296129 DAZ2Q13117 558 aaKnown RBP13.2□□□□□ -0.3
CDCP1-201ENST00000296129 DAZ4Q86SG3 579 aaKnown RBP13.2□□□□□ -0.3
CDCP1-201ENST00000296129 DAZ3Q9NR90 486 aaKnown RBP13.2□□□□□ -0.3
CDCP1-201ENST00000296129 FRMD6-AS1P0C7T7 363 aa13.2□□□□□ -0.3
CDCP1-201ENST00000296129 ESM1Q9NQ30 184 aa13.2□□□□□ -0.3
CDCP1-201ENST00000296129 K7EP13 123 aa13.19□□□□□ -0.3
CDCP1-201ENST00000296129 TRBV6-1A0A0K0K1D8 114 aa13.19□□□□□ -0.3
CDCP1-201ENST00000296129 CTRLP40313 264 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms