RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 FAM19A4Q96LR4 140 aa10.53□□□□□ -0.72
ABCF3-201ENST00000292808 DUX3Q96PT4 197 aa10.53□□□□□ -0.72
ABCF3-201ENST00000292808 SPRY2O43597 315 aa10.52□□□□□ -0.72
ABCF3-201ENST00000292808 SNAI2O43623 268 aa10.52□□□□□ -0.72
ABCF3-201ENST00000292808 C4orf3Q8WVX3 66 aa10.52□□□□□ -0.72
ABCF3-201ENST00000292808 NXT2Q9NPJ8 142 aaKnown RBP10.52□□□□□ -0.72
ABCF3-201ENST00000292808 TNFRSF6BO95407 300 aa10.52□□□□□ -0.73
ABCF3-201ENST00000292808 GATA1P15976 413 aaPredicted RBP10.52□□□□□ -0.73
ABCF3-201ENST00000292808 SPANXN1Q5VSR9 72 aa10.52□□□□□ -0.73
ABCF3-201ENST00000292808 PMCHL2Q9BQD1 86 aa10.52□□□□□ -0.73
ABCF3-201ENST00000292808 OTOGQ6ZRI0 2925 aa10.52□□□□□ -0.73
ABCF3-201ENST00000292808 TRAV21A0A0B4J279 112 aa10.51□□□□□ -0.73
ABCF3-201ENST00000292808 CACNG7P62955 275 aa10.51□□□□□ -0.73
ABCF3-201ENST00000292808 DEFB125Q8N687 156 aa10.51□□□□□ -0.73
ABCF3-201ENST00000292808 WFDC12Q8WWY7 111 aa10.51□□□□□ -0.73
ABCF3-201ENST00000292808 GOLT1BQ9Y3E0 138 aa10.51□□□□□ -0.73
ABCF3-201ENST00000292808 RNASE1P07998 156 aaKnown RBP10.51□□□□□ -0.73
ABCF3-201ENST00000292808 ID1P41134 155 aa10.51□□□□□ -0.73
ABCF3-201ENST00000292808 IFI27L1Q96BM0 104 aa10.51□□□□□ -0.73
ABCF3-201ENST00000292808 TMEM160Q9NX00 188 aa10.51□□□□□ -0.73
ABCF3-201ENST00000292808 COX8AP10176 69 aa10.5□□□□□ -0.73
ABCF3-201ENST00000292808 SMIM15Q7Z3B0 74 aa10.5□□□□□ -0.73
ABCF3-201ENST00000292808 OR11H1Q8NG94 326 aa10.5□□□□□ -0.73
ABCF3-201ENST00000292808 LINC01619G3V211 115 aa10.5□□□□□ -0.73
ABCF3-201ENST00000292808 K7EQG2 157 aa10.5□□□□□ -0.73
ABCF3-201ENST00000292808 ANXA2RQ3ZCQ2 193 aa10.5□□□□□ -0.73
ABCF3-201ENST00000292808 ORAOV1Q8WV07 137 aa10.5□□□□□ -0.73
ABCF3-201ENST00000292808 ZNF688P0C7X2 276 aa10.49□□□□□ -0.73
ABCF3-201ENST00000292808 S100A4P26447 101 aaKnown RBP10.49□□□□□ -0.73
ABCF3-201ENST00000292808 FCER1GP30273 86 aa10.49□□□□□ -0.73
ABCF3-201ENST00000292808 KHDC1LQ5JSQ8 128 aa10.49□□□□□ -0.73
ABCF3-201ENST00000292808 KLHL30-AS1Q8NEE0 82 aa10.49□□□□□ -0.73
ABCF3-201ENST00000292808 OR1N2Q8NGR9 330 aa10.49□□□□□ -0.73
ABCF3-201ENST00000292808 NOTCH2Q04721 2471 aa10.49□□□□□ -0.73
ABCF3-201ENST00000292808 TRAV26-2A0A0B4J265 109 aa10.49□□□□□ -0.73
ABCF3-201ENST00000292808 TRBV7-9A0A0J9YWB2 115 aa10.49□□□□□ -0.73
ABCF3-201ENST00000292808 LY6G6DO95868 133 aa10.49□□□□□ -0.73
ABCF3-201ENST00000292808 APRG1Q8IVJ8 170 aa10.49□□□□□ -0.73
ABCF3-201ENST00000292808 IGLV2-18A0A075B6J9 118 aa10.48□□□□□ -0.73
ABCF3-201ENST00000292808 NPSP0C0P6 89 aa10.48□□□□□ -0.73
ABCF3-201ENST00000292808 PSMG4Q5JS54 123 aa10.48□□□□□ -0.73
ABCF3-201ENST00000292808 Q8N8P6 123 aa10.48□□□□□ -0.73
ABCF3-201ENST00000292808 TP73-AS1Q9UF72 201 aa10.48□□□□□ -0.73
ABCF3-201ENST00000292808 M0R381 172 aa10.48□□□□□ -0.73
ABCF3-201ENST00000292808 GNRH2O43555 120 aa10.48□□□□□ -0.73
ABCF3-201ENST00000292808 CD28P10747 220 aa10.48□□□□□ -0.73
ABCF3-201ENST00000292808 HILS1P60008 231 aa10.48□□□□□ -0.73
ABCF3-201ENST00000292808 MPV17L2Q567V2 206 aa10.48□□□□□ -0.73
ABCF3-201ENST00000292808 SAMD13Q5VXD3 122 aa10.48□□□□□ -0.73
ABCF3-201ENST00000292808 C12orf54Q6X4T0 127 aa10.48□□□□□ -0.73
ABCF3-201ENST00000292808 OR2K2Q8NGT1 345 aa10.48□□□□□ -0.73
ABCF3-201ENST00000292808 LINC01006Q8NI28 216 aa10.48□□□□□ -0.73
ABCF3-201ENST00000292808 DLX4Q92988 240 aaPredicted RBP10.48□□□□□ -0.73
ABCF3-201ENST00000292808 C16orf95Q9H693 158 aa10.48□□□□□ -0.73
ABCF3-201ENST00000292808 ASIPP42127 132 aa10.47□□□□□ -0.73
ABCF3-201ENST00000292808 C11orf44Q8N8P7 122 aa10.47□□□□□ -0.73
ABCF3-201ENST00000292808 NUDT3O95989 172 aa10.47□□□□□ -0.73
ABCF3-201ENST00000292808 IGKV3-20P01619 116 aa10.47□□□□□ -0.73
ABCF3-201ENST00000292808 LEPP41159 167 aa10.47□□□□□ -0.73
ABCF3-201ENST00000292808 BVES-AS1Q5T3Y7 98 aa10.47□□□□□ -0.73
ABCF3-201ENST00000292808 NRACQ8N912 160 aa10.47□□□□□ -0.73
ABCF3-201ENST00000292808 COX11Q9Y6N1 276 aa10.47□□□□□ -0.73
ABCF3-201ENST00000292808 OR9G4Q8NGQ1 327 aa10.46□□□□□ -0.73
ABCF3-201ENST00000292808 HIVEP2P31629 2446 aa10.46□□□□□ -0.73
ABCF3-201ENST00000292808 MED14OSP0DP75 135 aa10.46□□□□□ -0.74
ABCF3-201ENST00000292808 RAX2Q96IS3 184 aa10.46□□□□□ -0.74
ABCF3-201ENST00000292808 PHLDA3Q9Y5J5 127 aa10.46□□□□□ -0.74
ABCF3-201ENST00000292808 FGF6P10767 208 aa10.45□□□□□ -0.74
ABCF3-201ENST00000292808 C2orf91Q6ZV80 131 aa10.45□□□□□ -0.74
ABCF3-201ENST00000292808 MRAP2Q96G30 205 aa10.45□□□□□ -0.74
ABCF3-201ENST00000292808 KLLNB2CW77 178 aa10.45□□□□□ -0.74
ABCF3-201ENST00000292808 SNRPD3P62318 126 aaKnown RBP10.45□□□□□ -0.74
ABCF3-201ENST00000292808 FHL3Q13643 280 aa10.45□□□□□ -0.74
ABCF3-201ENST00000292808 AGRNO00468 2067 aa10.45□□□□□ -0.74
ABCF3-201ENST00000292808 A0A0J9YX75 114 aa10.44□□□□□ -0.74
ABCF3-201ENST00000292808 ZNF418Q8TF45 676 aaPredicted RBP10.44□□□□□ -0.74
ABCF3-201ENST00000292808 CITED2Q99967 270 aaPredicted RBP10.44□□□□□ -0.74
ABCF3-201ENST00000292808 SORL1Q92673 2214 aa10.44□□□□□ -0.74
ABCF3-201ENST00000292808 TRAV12-3A0A0B4J271 114 aa10.44□□□□□ -0.74
ABCF3-201ENST00000292808 A0A1W2PRX2 142 aa10.44□□□□□ -0.74
ABCF3-201ENST00000292808 SCGB2A2Q13296 93 aa10.44□□□□□ -0.74
ABCF3-201ENST00000292808 BOD1L2Q8IYS8 172 aa10.44□□□□□ -0.74
ABCF3-201ENST00000292808 C18orf15Q96N68 181 aa10.44□□□□□ -0.74
ABCF3-201ENST00000292808 ZMAT4Q9H898 229 aa10.44□□□□□ -0.74
ABCF3-201ENST00000292808 SETD2Q9BYW2 2564 aaPredicted RBP10.44□□□□□ -0.74
ABCF3-201ENST00000292808 RNASE3P12724 160 aaKnown RBP10.43□□□□□ -0.74
ABCF3-201ENST00000292808 C14orf178Q8N769 122 aaPredicted RBP10.43□□□□□ -0.74
ABCF3-201ENST00000292808 TMEM158Q8WZ71 300 aa10.43□□□□□ -0.74
ABCF3-201ENST00000292808 FAM159AQ6UWV7 190 aa10.43□□□□□ -0.74
ABCF3-201ENST00000292808 TMEM61Q8N0U2 210 aa10.43□□□□□ -0.74
ABCF3-201ENST00000292808 PEMTQ9UBM1 199 aa10.43□□□□□ -0.74
ABCF3-201ENST00000292808 TRAV12-2A0A075B6T6 113 aa10.42□□□□□ -0.74
ABCF3-201ENST00000292808 SIVA1O15304 175 aa10.42□□□□□ -0.74
ABCF3-201ENST00000292808 LAGE3Q14657 143 aa10.42□□□□□ -0.74
ABCF3-201ENST00000292808 ODF1Q14990 250 aa10.42□□□□□ -0.74
ABCF3-201ENST00000292808 DKK2Q9UBU2 259 aa10.42□□□□□ -0.74
ABCF3-201ENST00000292808 ATP5LO75964 103 aa10.42□□□□□ -0.74
ABCF3-201ENST00000292808 MGPP08493 103 aa10.42□□□□□ -0.74
ABCF3-201ENST00000292808 SETXQ7Z333 2677 aaKnown RBP10.41□□□□□ -0.74
ABCF3-201ENST00000292808 SMIM17P0DL12 118 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms