RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 RNASE8Q8TDE3 154 aaKnown RBP3.72□□□□□ -1.81
UBR1-201ENST00000290650 C1orf159Q96HA4 380 aa3.72□□□□□ -1.81
UBR1-201ENST00000290650 TP53TG1Q9Y2A0 90 aa3.72□□□□□ -1.81
UBR1-201ENST00000290650 LRRK2Q5S007 2527 aa3.72□□□□□ -1.81
UBR1-201ENST00000290650 FAM223BA6NKX1 122 aa3.72□□□□□ -1.81
UBR1-201ENST00000290650 P0C879 139 aa3.72□□□□□ -1.81
UBR1-201ENST00000290650 CLPSL2Q6UWE3 100 aa3.72□□□□□ -1.81
UBR1-201ENST00000290650 FAM223AQ8IWN6 122 aa3.72□□□□□ -1.81
UBR1-201ENST00000290650 C11orf52Q96A22 123 aa3.72□□□□□ -1.81
UBR1-201ENST00000290650 DPH3P1Q9H4G8 78 aa3.72□□□□□ -1.81
UBR1-201ENST00000290650 GDF5OSQ5U4N7 250 aa3.72□□□□□ -1.81
UBR1-201ENST00000290650 C10orf99Q6UWK7 81 aa3.72□□□□□ -1.81
UBR1-201ENST00000290650 C9orf139Q6ZV77 190 aa3.72□□□□□ -1.81
UBR1-201ENST00000290650 MRPL27Q9P0M9 148 aaKnown RBP3.72□□□□□ -1.81
UBR1-201ENST00000290650 TACC2O95359 2948 aa3.72□□□□□ -1.81
UBR1-201ENST00000290650 IGLV1-47P01700 117 aa3.72□□□□□ -1.81
UBR1-201ENST00000290650 IGF1P05019 195 aa3.72□□□□□ -1.81
UBR1-201ENST00000290650 EIF4EBP1Q13541 118 aaPredicted RBP3.72□□□□□ -1.81
UBR1-201ENST00000290650 RASL11AQ6T310 242 aa3.71□□□□□ -1.81
UBR1-201ENST00000290650 LYPD1Q8N2G4 141 aa3.71□□□□□ -1.81
UBR1-201ENST00000290650 CHCHD5Q9BSY4 110 aa3.71□□□□□ -1.81
UBR1-201ENST00000290650 MRPL35Q9NZE8 188 aaKnown RBP3.71□□□□□ -1.81
UBR1-201ENST00000290650 OOSP1A8MZH6 123 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 PRSS46E5RG02 174 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 LOXL1Q08397 574 aaPredicted RBP3.71□□□□□ -1.82
UBR1-201ENST00000290650 JPT2Q9H910 190 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 OR11H6Q8NGC7 330 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 AJUBAQ96IF1 538 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 IGLV11-55A0A075B6I3 123 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 FAM231BA6NCW3 169 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 TMEM238C9JI98 176 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 CCL25O15444 150 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 PPBPP02775 128 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 UBE2V1Q13404 147 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 PDE6HQ13956 83 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 ORMDL2Q53FV1 153 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 USMG5Q96IX5 58 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 LINC00310P59036 64 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 GAGE1Q13065 139 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 PMVKQ15126 192 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 TMEM101Q96IK0 257 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 H7C1H1 209 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 Q6ZQT7 251 aa3.71□□□□□ -1.82
UBR1-201ENST00000290650 SLC25A16P16260 332 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 ZNF80P51504 273 aaPredicted RBP3.7□□□□□ -1.82
UBR1-201ENST00000290650 GAGE2BQ13066 116 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 GAGE2EQ4V326 116 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 CHAC1Q9BUX1 264 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 ESM1Q9NQ30 184 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 ZNF492Q9P255 531 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 GAGE2DQ9UEU5 116 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 GAGE12JA6NER3 117 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 VWC2LB2RUY7 222 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 PRM2P04554 102 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 GAGE4Q13068 117 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 GAGE5Q13069 117 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 CIRBPQ14011 172 aaKnown RBP3.7□□□□□ -1.82
UBR1-201ENST00000290650 GAGE13Q4V321 117 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 C5orf56Q8N8D9 126 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 ZNF479Q96JC4 524 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 FANCD2OSQ96PS1 177 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 PKD1L2Q7Z442 2459 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 CGB3P0DN86 165 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 CGB7P0DN87 165 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 PAX2Q02962 417 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 GFRA4Q9GZZ7 299 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 TMEM14CQ9P0S9 112 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 COX11Q9Y6N1 276 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 HOXD3P31249 432 aaPredicted RBP3.7□□□□□ -1.82
UBR1-201ENST00000290650 C2orf66Q6UXQ4 117 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 Q6ZS46 218 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 GAGE12BA1L429 117 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 GAGE7O76087 117 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 GAGE12FP0CL80 117 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 GAGE12GP0CL81 117 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 GAGE12IP0CL82 117 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 CDKN1BP46527 198 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 AMTNQ6UX39 209 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 DUSP14O95147 198 aaKnown RBP3.7□□□□□ -1.82
UBR1-201ENST00000290650 COX6CP09669 75 aa3.7□□□□□ -1.82
UBR1-201ENST00000290650 IGLV2-8P01709 118 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 FAM231DQ6ZW35 169 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 SPANXDQ9BXN6 97 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 IGHV7-4-1A0A0J9YVY3 117 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 SDHAF1A6NFY7 115 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 HSD52Q0P140 79 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 OCIAD2Q56VL3 154 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 SRSF8Q9BRL6 282 aaKnown RBP3.69□□□□□ -1.82
UBR1-201ENST00000290650 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.69□□□□□ -1.82
UBR1-201ENST00000290650 IGKV2-29A2NJV5 120 aaPredicted RBP3.69□□□□□ -1.82
UBR1-201ENST00000290650 BUB3O43684 328 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 RPL39P62891 51 aaKnown RBP3.69□□□□□ -1.82
UBR1-201ENST00000290650 TRGV11A0A075B6L2 103 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 IGHV4OR15-8A0A075B7B6 117 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 A0A087WW49 117 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 NPBQ8NG41 125 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 GTSF1LQ9H1H1 148 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 PGPEP1Q9NXJ5 209 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 ZNF462Q96JM2 2506 aa3.69□□□□□ -1.82
UBR1-201ENST00000290650 ANKRD39Q53RE8 183 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms