RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 METTL1Q9UBP6 276 aaKnown RBP3.14□□□□□ -1.91
CD44-202ENST00000278385 ROS1P08922 2347 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 ITPR3Q14573 2671 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 PRR14LQ5THK1 2151 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 CADP27708 2225 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 DSCAML1Q8TD84 2053 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 IGLV11-55A0A075B6I3 123 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 TRAV13-1A0A0B4J241 112 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 FAM236AA0A1B0GUQ0 79 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 FAM236BA0A1B0GV22 79 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 ZNF727A8MUV8 499 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 M0R135 149 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 GNGT2O14610 69 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 KRASP01116 189 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 IGHV1-8P0DP01 117 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 CRHBPP24387 322 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 S100A4P26447 101 aaKnown RBP3.13□□□□□ -1.91
CD44-202ENST00000278385 LYZP61626 148 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 RPL30P62888 115 aaKnown RBP3.13□□□□□ -1.91
CD44-202ENST00000278385 QRFPP83859 136 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 HSD52Q0P140 79 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 DIAPH2-AS1Q14236 149 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 LINC01554Q52M75 96 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 MEIG1Q5JSS6 88 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 ZNF880Q6PDB4 577 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 LCN15Q6UWW0 184 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 Q6ZR03 302 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 PHF5AQ7RTV0 110 aaKnown RBP3.13□□□□□ -1.91
CD44-202ENST00000278385 OR5AS1Q8N127 324 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 SUMF2Q8NBJ7 301 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 OR10G2Q8NGC3 310 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 LINC01006Q8NI28 216 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 OPRPNQ99935 248 aaPredicted RBP3.13□□□□□ -1.91
CD44-202ENST00000278385 ADAT1Q9BUB4 502 aaKnown RBP3.13□□□□□ -1.91
CD44-202ENST00000278385 SCP2D1Q9UJQ7 156 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 LHFPL6Q9Y693 200 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 ABCA2Q9BZC7 2435 aa3.13□□□□□ -1.91
CD44-202ENST00000278385 FN1P02751 2386 aaKnown RBP3.12□□□□□ -1.91
CD44-202ENST00000278385 TEP1Q99973 2627 aaKnown RBP3.12□□□□□ -1.91
CD44-202ENST00000278385 CSPG4Q6UVK1 2322 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 IGHV3-49A0A0A0MS15 119 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 IGKV1-9A0A0C4DH69 117 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 LEUTXA8MZ59 168 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 H3BMG7 143 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 CCDC179H3BU77 68 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 APCSP02743 223 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 CXCL1P09341 107 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 P0C879 139 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 BRS3P32247 399 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 CSN1S1P47710 185 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 UBE2BP63146 152 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 SPRNQ5BIV9 151 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 C15orf56Q8N910 161 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 KLHL30-AS1Q8NEE0 82 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 OR8D4Q8NGM9 314 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 PLA2G12AQ9BZM1 189 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 CMC2Q9NRP2 79 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 OR5V1Q9UGF6 321 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 CELA1Q9UNI1 258 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 MPC1Q9Y5U8 109 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 ALPK2Q86TB3 2170 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 ACANP16112 2415 aa3.12□□□□□ -1.91
CD44-202ENST00000278385 TRBV27A0A0K0K1C4 114 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 TCRBV3S1A0A5B6 114 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 C7orf71A4D174 169 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 OR2T8A6NH00 312 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 A8MWV9 139 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 CGB3P0DN86 165 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 CGB7P0DN87 165 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 CRYBB3P26998 211 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 DYNLT3P51808 116 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 KRTAP10-6P60371 365 aaPredicted RBP3.11□□□□□ -1.91
CD44-202ENST00000278385 YPEL3P61236 119 aaPredicted RBP3.11□□□□□ -1.91
CD44-202ENST00000278385 EIF5AP63241 154 aaKnown RBP3.11□□□□□ -1.91
CD44-202ENST00000278385 HBBP68871 147 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 HES1Q14469 280 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 LINC01590Q5TEZ4 76 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 ZC2HC1BQ5TFG8 222 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 FAM104BQ5XKR9 115 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 AMTNQ6UX39 209 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 CEND1Q8N111 149 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 DEFB108BQ8NET1 73 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 OR8B3Q8NGG8 313 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 OR8B2Q96RD0 313 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 MRPL32Q9BYC8 188 aaKnown RBP3.11□□□□□ -1.91
CD44-202ENST00000278385 SLC39A9Q9NUM3 307 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 PHLDA3Q9Y5J5 127 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 V9GYS6 101 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 MTORP42345 2549 aa3.11□□□□□ -1.91
CD44-202ENST00000278385 ABCA1O95477 2261 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 HEATR1Q9H583 2144 aaKnown RBP3.1□□□□□ -1.91
CD44-202ENST00000278385 ARFGEF3Q5TH69 2177 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 IGHV3-21A0A0B4J1V1 117 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 FNDC10F2Z333 226 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 NDUFB3O43676 98 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 MPC2O95563 127 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 LHBP01229 141 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 INSP01308 110 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 GYPBP06028 91 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms