RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 LYPD6Q86Y78 171 aa13.16□□□□□ -0.3
TSPAN3-201ENST00000267970 ICOSQ9Y6W8 199 aa13.15□□□□□ -0.3
TSPAN3-201ENST00000267970 A0A0J9YXV3 536 aa13.15□□□□□ -0.3
TSPAN3-201ENST00000267970 FXYD2P54710 66 aa13.15□□□□□ -0.3
TSPAN3-201ENST00000267970 VWA8A3KMH1 1905 aa13.15□□□□□ -0.3
TSPAN3-201ENST00000267970 A4D1N5 150 aa13.15□□□□□ -0.31
TSPAN3-201ENST00000267970 DEFB112Q30KQ8 113 aa13.15□□□□□ -0.31
TSPAN3-201ENST00000267970 PKIGQ9Y2B9 76 aa13.15□□□□□ -0.31
TSPAN3-201ENST00000267970 A0A0B4J2C4 111 aa13.14□□□□□ -0.31
TSPAN3-201ENST00000267970 HIST2H2BCQ6DN03 193 aa13.14□□□□□ -0.31
TSPAN3-201ENST00000267970 PRSS33Q8NF86 280 aa13.14□□□□□ -0.31
TSPAN3-201ENST00000267970 SLC25A29Q8N8R3 303 aa13.14□□□□□ -0.31
TSPAN3-201ENST00000267970 PTH2Q96A98 100 aa13.14□□□□□ -0.31
TSPAN3-201ENST00000267970 CNOT1A5YKK6 2376 aaKnown RBP13.13□□□□□ -0.31
TSPAN3-201ENST00000267970 RLFQ13129 1914 aa13.13□□□□□ -0.31
TSPAN3-201ENST00000267970 PYGO2Q9BRQ0 406 aa13.13□□□□□ -0.31
TSPAN3-201ENST00000267970 GYPEP15421 78 aa13.13□□□□□ -0.31
TSPAN3-201ENST00000267970 SBF1O95248 1867 aa13.13□□□□□ -0.31
TSPAN3-201ENST00000267970 TICRRQ7Z2Z1 1910 aa13.13□□□□□ -0.31
TSPAN3-201ENST00000267970 PROP1O75360 226 aa13.13□□□□□ -0.31
TSPAN3-201ENST00000267970 DEFB125Q8N687 156 aa13.13□□□□□ -0.31
TSPAN3-201ENST00000267970 K7EM74 188 aa13.12□□□□□ -0.31
TSPAN3-201ENST00000267970 Q8TCH9 128 aa13.12□□□□□ -0.31
TSPAN3-201ENST00000267970 NRGNQ92686 78 aa13.12□□□□□ -0.31
TSPAN3-201ENST00000267970 FOXI2Q6ZQN5 318 aa13.12□□□□□ -0.31
TSPAN3-201ENST00000267970 C20orf78Q9BR46 151 aa13.12□□□□□ -0.31
TSPAN3-201ENST00000267970 CTSZQ9UBR2 303 aa13.12□□□□□ -0.31
TSPAN3-201ENST00000267970 TNRC6BQ9UPQ9 1833 aaKnown RBP13.12□□□□□ -0.31
TSPAN3-201ENST00000267970 SIVA1O15304 175 aa13.12□□□□□ -0.31
TSPAN3-201ENST00000267970 VSIG2Q96IQ7 327 aa13.12□□□□□ -0.31
TSPAN3-201ENST00000267970 ETDCA0A1B0GVM5 59 aa13.12□□□□□ -0.31
TSPAN3-201ENST00000267970 CRYGBP07316 175 aa13.12□□□□□ -0.31
TSPAN3-201ENST00000267970 PRR20EP86478 221 aa13.11□□□□□ -0.31
TSPAN3-201ENST00000267970 PRR20CP86479 221 aa13.11□□□□□ -0.31
TSPAN3-201ENST00000267970 PRR20DP86480 221 aa13.11□□□□□ -0.31
TSPAN3-201ENST00000267970 PRR20BP86481 221 aa13.11□□□□□ -0.31
TSPAN3-201ENST00000267970 PRR20AP86496 221 aa13.11□□□□□ -0.31
TSPAN3-201ENST00000267970 SND1-IT1Q9HBX3 110 aa13.11□□□□□ -0.31
TSPAN3-201ENST00000267970 TMEM61Q8N0U2 210 aa13.11□□□□□ -0.31
TSPAN3-201ENST00000267970 PLA2G2EQ9NZK7 142 aa13.11□□□□□ -0.31
TSPAN3-201ENST00000267970 PLCE1Q9P212 2302 aa13.11□□□□□ -0.31
TSPAN3-201ENST00000267970 FUSP35637 526 aaKnown RBP eCLIP13.11□□□□□ -0.313e-6■□□□□ 10.8
TSPAN3-201ENST00000267970 NREPQ16612 68 aa13.11□□□□□ -0.31
TSPAN3-201ENST00000267970 TMEM190Q8WZ59 177 aa13.11□□□□□ -0.31
TSPAN3-201ENST00000267970 PRAC2D3DTV9 90 aa13.1□□□□□ -0.31
TSPAN3-201ENST00000267970 IGHV4-38-2P0DP08 117 aa13.1□□□□□ -0.31
TSPAN3-201ENST00000267970 CAMK2N2Q96S95 79 aa13.1□□□□□ -0.31
TSPAN3-201ENST00000267970 OPRPNQ99935 248 aaPredicted RBP13.1□□□□□ -0.31
TSPAN3-201ENST00000267970 WDR81Q562E7 1941 aa13.1□□□□□ -0.31
TSPAN3-201ENST00000267970 MP68P56378 58 aa13.1□□□□□ -0.31
TSPAN3-201ENST00000267970 SEM1Q6ZVN7 128 aa13.1□□□□□ -0.31
TSPAN3-201ENST00000267970 ATOX1O00244 68 aa13.1□□□□□ -0.31
TSPAN3-201ENST00000267970 RHOHQ15669 191 aa13.1□□□□□ -0.31
TSPAN3-201ENST00000267970 WDR90Q96KV7 1748 aa13.09□□□□□ -0.31
TSPAN3-201ENST00000267970 TRAV23DV6A0A075B6W5 121 aa13.09□□□□□ -0.31
TSPAN3-201ENST00000267970 CCL24O00175 119 aa13.09□□□□□ -0.31
TSPAN3-201ENST00000267970 BLCAPP62952 87 aa13.08□□□□□ -0.31
TSPAN3-201ENST00000267970 C11orf52Q96A22 123 aa13.08□□□□□ -0.32
TSPAN3-201ENST00000267970 SPANXDQ9BXN6 97 aa13.08□□□□□ -0.32
TSPAN3-201ENST00000267970 FGF23Q9GZV9 251 aaPredicted RBP13.07□□□□□ -0.32
TSPAN3-201ENST00000267970 LY6G6EA0A0G2JKS1 128 aa13.07□□□□□ -0.32
TSPAN3-201ENST00000267970 U3KQA8 63 aa13.07□□□□□ -0.32
TSPAN3-201ENST00000267970 IGKV2D-26A0A0A0MRZ7 120 aa13.07□□□□□ -0.32
TSPAN3-201ENST00000267970 HERV-K104P63124 156 aa13.07□□□□□ -0.32
TSPAN3-201ENST00000267970 CEMP1Q6PRD7 247 aaPredicted RBP13.07□□□□□ -0.32
TSPAN3-201ENST00000267970 K7ENP7 123 aa13.07□□□□□ -0.32
TSPAN3-201ENST00000267970 TIRAPP58753 221 aa13.07□□□□□ -0.32
TSPAN3-201ENST00000267970 GTSF1Q8WW33 167 aa13.07□□□□□ -0.32
TSPAN3-201ENST00000267970 TP73-AS1Q9UF72 201 aa13.06□□□□□ -0.32
TSPAN3-201ENST00000267970 FAM215AQ9Y5M1 114 aa13.06□□□□□ -0.32
TSPAN3-201ENST00000267970 TSC2P49815 1807 aa13.06□□□□□ -0.32
TSPAN3-201ENST00000267970 FOXI1Q12951 378 aa13.06□□□□□ -0.32
TSPAN3-201ENST00000267970 ZNF503Q96F45 646 aa13.06□□□□□ -0.32
TSPAN3-201ENST00000267970 SHANK1Q9Y566 2161 aa13.06□□□□□ -0.32
TSPAN3-201ENST00000267970 C9orf47Q6ZRZ4 202 aa13.05□□□□□ -0.32
TSPAN3-201ENST00000267970 Q8NFD4 153 aa13.05□□□□□ -0.32
TSPAN3-201ENST00000267970 AJUBAQ96IF1 538 aa13.05□□□□□ -0.32
TSPAN3-201ENST00000267970 LECT2O14960 151 aa13.05□□□□□ -0.32
TSPAN3-201ENST00000267970 CFPP27918 469 aa13.05□□□□□ -0.32
TSPAN3-201ENST00000267970 PIFOQ8TCI5 191 aa13.05□□□□□ -0.32
TSPAN3-201ENST00000267970 LINC01620Q4KN68 170 aa13.05□□□□□ -0.32
TSPAN3-201ENST00000267970 DSCAML1Q8TD84 2053 aa13.05□□□□□ -0.32
TSPAN3-201ENST00000267970 TNRC6AQ8NDV7 1962 aaKnown RBP13.05□□□□□ -0.32
TSPAN3-201ENST00000267970 KIR2DL5BA0A0G2JN68 375 aa13.05□□□□□ -0.32
TSPAN3-201ENST00000267970 KIR2DL5BA0A0G2JPC4 375 aa13.05□□□□□ -0.32
TSPAN3-201ENST00000267970 K7EQD1 137 aa13.05□□□□□ -0.32
TSPAN3-201ENST00000267970 KIR2DL5AQ8N109 375 aa13.05□□□□□ -0.32
TSPAN3-201ENST00000267970 FRMPD3Q5JV73 1810 aa13.05□□□□□ -0.32
TSPAN3-201ENST00000267970 H0Y9J4 135 aa13.04□□□□□ -0.32
TSPAN3-201ENST00000267970 PATE2Q6UY27 113 aa13.04□□□□□ -0.32
TSPAN3-201ENST00000267970 C11orf53Q8IXP5 236 aa13.04□□□□□ -0.32
TSPAN3-201ENST00000267970 LGALS9O00182 355 aa13.04□□□□□ -0.32
TSPAN3-201ENST00000267970 ETV2O00321 342 aaPredicted RBP13.04□□□□□ -0.32
TSPAN3-201ENST00000267970 PCNX2A6NKB5 2137 aa13.03□□□□□ -0.32
TSPAN3-201ENST00000267970 Q8N1Y9 231 aa13.03□□□□□ -0.32
TSPAN3-201ENST00000267970 LINC00311Q8N616 119 aa13.03□□□□□ -0.32
TSPAN3-201ENST00000267970 RMI2Q96E14 147 aa13.03□□□□□ -0.32
TSPAN3-201ENST00000267970 TAX1BP3O14907 124 aa13.03□□□□□ -0.32
TSPAN3-201ENST00000267970 GATA3P23771 443 aa13.03□□□□□ -0.32
TSPAN3-201ENST00000267970 SCXQ7RTU7 201 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms