RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 DCANP1Q8TF63 244 aa14.06□□□□□ -0.16
PDLIM4-201ENST00000253754 K7EMT4 169 aa14.05□□□□□ -0.16
PDLIM4-201ENST00000253754 CD5LO43866 347 aa14.05□□□□□ -0.16
PDLIM4-201ENST00000253754 SMIM15Q7Z3B0 74 aa14.05□□□□□ -0.16
PDLIM4-201ENST00000253754 TEX29Q8N6K0 151 aa14.05□□□□□ -0.16
PDLIM4-201ENST00000253754 TEP1Q99973 2627 aaKnown RBP14.05□□□□□ -0.16
PDLIM4-201ENST00000253754 GNRH2O43555 120 aa14.04□□□□□ -0.16
PDLIM4-201ENST00000253754 Q6ZVH6 145 aa14.04□□□□□ -0.16
PDLIM4-201ENST00000253754 RNASE8Q8TDE3 154 aaKnown RBP14.04□□□□□ -0.16
PDLIM4-201ENST00000253754 NIPBLQ6KC79 2804 aaeCLIP14.04□□□□□ -0.16
PDLIM4-201ENST00000253754 LINC01546A6NGU7 62 aa14.04□□□□□ -0.16
PDLIM4-201ENST00000253754 S100A4P26447 101 aaKnown RBP14.04□□□□□ -0.16
PDLIM4-201ENST00000253754 NXT2Q9NPJ8 142 aaKnown RBP14.04□□□□□ -0.16
PDLIM4-201ENST00000253754 IGLV2-18A0A075B6J9 118 aa14.03□□□□□ -0.16
PDLIM4-201ENST00000253754 MS4A6AQ9H2W1 248 aa14.03□□□□□ -0.16
PDLIM4-201ENST00000253754 ZNF702PQ9H963 129 aa14.03□□□□□ -0.16
PDLIM4-201ENST00000253754 ANK3Q12955 4377 aaKnown RBP14.03□□□□□ -0.16
PDLIM4-201ENST00000253754 K7EP13 123 aa14.03□□□□□ -0.16
PDLIM4-201ENST00000253754 ASIPP42127 132 aa14.03□□□□□ -0.16
PDLIM4-201ENST00000253754 LGALS9BQ3B8N2 356 aa14.03□□□□□ -0.16
PDLIM4-201ENST00000253754 LGALS9CQ6DKI2 356 aa14.03□□□□□ -0.16
PDLIM4-201ENST00000253754 SYNJ2BPP57105 145 aa14.02□□□□□ -0.16
PDLIM4-201ENST00000253754 MPV17L2Q567V2 206 aa14.02□□□□□ -0.16
PDLIM4-201ENST00000253754 DKK2Q9UBU2 259 aa14.02□□□□□ -0.16
PDLIM4-201ENST00000253754 ZNF688P0C7X2 276 aa14.02□□□□□ -0.17
PDLIM4-201ENST00000253754 FCER1GP30273 86 aa14.02□□□□□ -0.17
PDLIM4-201ENST00000253754 APRG1Q8IVJ8 170 aa14.02□□□□□ -0.17
PDLIM4-201ENST00000253754 Q8N8P6 123 aa14.02□□□□□ -0.17
PDLIM4-201ENST00000253754 TMEM158Q8WZ71 300 aa14.02□□□□□ -0.17
PDLIM4-201ENST00000253754 IGHV4OR15-8A0A075B7B6 117 aa14.01□□□□□ -0.17
PDLIM4-201ENST00000253754 A0A087WW49 117 aa14.01□□□□□ -0.17
PDLIM4-201ENST00000253754 C14orf178Q8N769 122 aaPredicted RBP14.01□□□□□ -0.17
PDLIM4-201ENST00000253754 PHLDA3Q9Y5J5 127 aa14.01□□□□□ -0.17
PDLIM4-201ENST00000253754 RNASE3P12724 160 aaKnown RBP14□□□□□ -0.17
PDLIM4-201ENST00000253754 PSMG4Q5JS54 123 aa14□□□□□ -0.17
PDLIM4-201ENST00000253754 IGKV3-20P01619 116 aa13.99□□□□□ -0.17
PDLIM4-201ENST00000253754 ID1P41134 155 aa13.99□□□□□ -0.17
PDLIM4-201ENST00000253754 F8P00451 2351 aa13.99□□□□□ -0.17
PDLIM4-201ENST00000253754 HIVEP2P31629 2446 aa13.99□□□□□ -0.17
PDLIM4-201ENST00000253754 NUDT3O95989 172 aa13.99□□□□□ -0.17
PDLIM4-201ENST00000253754 COX8AP10176 69 aa13.99□□□□□ -0.17
PDLIM4-201ENST00000253754 ORAOV1Q8WV07 137 aa13.99□□□□□ -0.17
PDLIM4-201ENST00000253754 TMEM89A2RUT3 159 aa13.98□□□□□ -0.17
PDLIM4-201ENST00000253754 KLLNB2CW77 178 aa13.98□□□□□ -0.17
PDLIM4-201ENST00000253754 LGALS1P09382 135 aaKnown RBP13.98□□□□□ -0.17
PDLIM4-201ENST00000253754 C18orf65Q6ZTR6 163 aa13.98□□□□□ -0.17
PDLIM4-201ENST00000253754 HOXD3P31249 432 aaPredicted RBP13.97□□□□□ -0.17
PDLIM4-201ENST00000253754 C2orf91Q6ZV80 131 aa13.97□□□□□ -0.17
PDLIM4-201ENST00000253754 RPL39LQ96EH5 51 aaKnown RBP13.97□□□□□ -0.17
PDLIM4-201ENST00000253754 NSD1Q96L73 2696 aaPredicted RBP13.97□□□□□ -0.17
PDLIM4-201ENST00000253754 TRAV12-3A0A0B4J271 114 aa13.97□□□□□ -0.17
PDLIM4-201ENST00000253754 MGPP08493 103 aa13.97□□□□□ -0.17
PDLIM4-201ENST00000253754 DEFB136Q30KP8 78 aa13.97□□□□□ -0.17
PDLIM4-201ENST00000253754 HIST2H2BDQ6DRA6 164 aa13.97□□□□□ -0.17
PDLIM4-201ENST00000253754 MYOZ3Q8TDC0 251 aa13.97□□□□□ -0.17
PDLIM4-201ENST00000253754 TRBV7-9A0A0J9YWB2 115 aa13.96□□□□□ -0.17
PDLIM4-201ENST00000253754 FGF6P10767 208 aa13.96□□□□□ -0.17
PDLIM4-201ENST00000253754 RASL10AQ92737 203 aa13.96□□□□□ -0.17
PDLIM4-201ENST00000253754 MRAP2Q96G30 205 aa13.96□□□□□ -0.17
PDLIM4-201ENST00000253754 SETD2Q9BYW2 2564 aaPredicted RBP13.96□□□□□ -0.17
PDLIM4-201ENST00000253754 TRAV12-2A0A075B6T6 113 aa13.95□□□□□ -0.18
PDLIM4-201ENST00000253754 DNAJC9-AS1A6NH13 148 aa13.95□□□□□ -0.18
PDLIM4-201ENST00000253754 CCL25O15444 150 aa13.95□□□□□ -0.18
PDLIM4-201ENST00000253754 PRSS1P07477 247 aa13.95□□□□□ -0.18
PDLIM4-201ENST00000253754 SMIM17P0DL12 118 aa13.95□□□□□ -0.18
PDLIM4-201ENST00000253754 LAGE3Q14657 143 aa13.95□□□□□ -0.18
PDLIM4-201ENST00000253754 PRSS47A8MTI9 375 aa13.95□□□□□ -0.18
PDLIM4-201ENST00000253754 ELANEP08246 267 aa13.95□□□□□ -0.18
PDLIM4-201ENST00000253754 ODF1Q14990 250 aa13.95□□□□□ -0.18
PDLIM4-201ENST00000253754 BVES-AS1Q5T3Y7 98 aa13.95□□□□□ -0.18
PDLIM4-201ENST00000253754 TMEM86BQ8N661 226 aa13.95□□□□□ -0.18
PDLIM4-201ENST00000253754 DPH3P1Q9H4G8 78 aa13.95□□□□□ -0.18
PDLIM4-201ENST00000253754 K7EQG2 157 aa13.94□□□□□ -0.18
PDLIM4-201ENST00000253754 DEFB125Q8N687 156 aa13.94□□□□□ -0.18
PDLIM4-201ENST00000253754 DPF1Q92782 380 aa13.94□□□□□ -0.18
PDLIM4-201ENST00000253754 SMIM2Q9BVW6 85 aa13.94□□□□□ -0.18
PDLIM4-201ENST00000253754 JPT2Q9H910 190 aa13.94□□□□□ -0.18
PDLIM4-201ENST00000253754 ESM1Q9NQ30 184 aa13.94□□□□□ -0.18
PDLIM4-201ENST00000253754 FAM159AQ6UWV7 190 aa13.93□□□□□ -0.18
PDLIM4-201ENST00000253754 UBE2E2Q96LR5 201 aa13.93□□□□□ -0.18
PDLIM4-201ENST00000253754 A0A0J9YX75 114 aa13.93□□□□□ -0.18
PDLIM4-201ENST00000253754 MED14OSP0DP75 135 aa13.93□□□□□ -0.18
PDLIM4-201ENST00000253754 PTTG1IPP53801 180 aa13.93□□□□□ -0.18
PDLIM4-201ENST00000253754 NMUP48645 174 aa13.92□□□□□ -0.18
PDLIM4-201ENST00000253754 SLURP1P55000 103 aa13.92□□□□□ -0.18
PDLIM4-201ENST00000253754 SNRPD3P62318 126 aaKnown RBP13.92□□□□□ -0.18
PDLIM4-201ENST00000253754 SAMD13Q5VXD3 122 aa13.92□□□□□ -0.18
PDLIM4-201ENST00000253754 ADAMTSL5Q6ZMM2 481 aa13.92□□□□□ -0.18
PDLIM4-201ENST00000253754 ERASQ7Z444 233 aa13.92□□□□□ -0.18
PDLIM4-201ENST00000253754 PCP2Q8IVA1 136 aa13.92□□□□□ -0.18
PDLIM4-201ENST00000253754 Q8N2B8 174 aa13.92□□□□□ -0.18
PDLIM4-201ENST00000253754 MUC4Q99102 2169 aa13.92□□□□□ -0.18
PDLIM4-201ENST00000253754 CD7P09564 240 aa13.92□□□□□ -0.18
PDLIM4-201ENST00000253754 SUMO2P61956 95 aaKnown RBP13.92□□□□□ -0.18
PDLIM4-201ENST00000253754 SVIPQ8NHG7 77 aa13.92□□□□□ -0.18
PDLIM4-201ENST00000253754 AP1S3Q96PC3 154 aa13.92□□□□□ -0.18
PDLIM4-201ENST00000253754 DUX3Q96PT4 197 aa13.92□□□□□ -0.18
PDLIM4-201ENST00000253754 CHTOPQ9Y3Y2 248 aaKnown RBP13.92□□□□□ -0.18
PDLIM4-201ENST00000253754 C7orf71A4D174 169 aa13.91□□□□□ -0.18
PDLIM4-201ENST00000253754 LY6G6DO95868 133 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms