RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 FXYD7P58549 80 aa13.29□□□□□ -0.28
KLHDC3-201ENST00000244670 ANXA2RQ3ZCQ2 193 aa13.29□□□□□ -0.28
KLHDC3-201ENST00000244670 MRPL51Q4U2R6 128 aaKnown RBP13.29□□□□□ -0.28
KLHDC3-201ENST00000244670 TMEM191AQ9H0A3 160 aa13.29□□□□□ -0.28
KLHDC3-201ENST00000244670 VWFP04275 2813 aa13.29□□□□□ -0.28
KLHDC3-201ENST00000244670 D6R8Y8 96 aa13.29□□□□□ -0.28
KLHDC3-201ENST00000244670 RAB4AP20338 218 aa13.29□□□□□ -0.28
KLHDC3-201ENST00000244670 DMRTA1Q5VZB9 504 aa13.29□□□□□ -0.28
KLHDC3-201ENST00000244670 ODF3Q96PU9 254 aa13.29□□□□□ -0.28
KLHDC3-201ENST00000244670 TIMM8BQ9Y5J9 83 aaPredicted RBP13.29□□□□□ -0.28
KLHDC3-201ENST00000244670 U3KQK5 164 aa13.29□□□□□ -0.28
KLHDC3-201ENST00000244670 H3BVH4 76 aa13.28□□□□□ -0.28
KLHDC3-201ENST00000244670 SNAI2O43623 268 aa13.28□□□□□ -0.28
KLHDC3-201ENST00000244670 OR5AL1P0C617 328 aa13.28□□□□□ -0.28
KLHDC3-201ENST00000244670 HLA-DRB4P13762 266 aa13.28□□□□□ -0.28
KLHDC3-201ENST00000244670 ODF3L2Q3SX64 289 aa13.28□□□□□ -0.28
KLHDC3-201ENST00000244670 AMTNQ6UX39 209 aa13.28□□□□□ -0.28
KLHDC3-201ENST00000244670 HLA-DRB4X5D2U9 266 aa13.28□□□□□ -0.28
KLHDC3-201ENST00000244670 C7orf71A4D174 169 aa13.27□□□□□ -0.28
KLHDC3-201ENST00000244670 CDKN1BP46527 198 aa13.27□□□□□ -0.28
KLHDC3-201ENST00000244670 RNF185Q96GF1 192 aa13.27□□□□□ -0.28
KLHDC3-201ENST00000244670 H3BMM0 161 aa13.27□□□□□ -0.29
KLHDC3-201ENST00000244670 LEPROTL1O95214 131 aa13.27□□□□□ -0.29
KLHDC3-201ENST00000244670 SPATA45Q537H7 98 aa13.27□□□□□ -0.29
KLHDC3-201ENST00000244670 LINC00482Q8N8I6 264 aa13.27□□□□□ -0.29
KLHDC3-201ENST00000244670 MIEN1Q9BRT3 115 aa13.27□□□□□ -0.29
KLHDC3-201ENST00000244670 TMEM70Q9BUB7 260 aa13.27□□□□□ -0.29
KLHDC3-201ENST00000244670 RBMY1BA6NDE4 496 aaKnown RBP13.26□□□□□ -0.29
KLHDC3-201ENST00000244670 RBMY1EA6NEQ0 496 aaKnown RBP13.26□□□□□ -0.29
KLHDC3-201ENST00000244670 SMKR1H3BMG3 65 aa13.26□□□□□ -0.29
KLHDC3-201ENST00000244670 GNRH2O43555 120 aa13.26□□□□□ -0.29
KLHDC3-201ENST00000244670 SPRY2O43597 315 aa13.26□□□□□ -0.29
KLHDC3-201ENST00000244670 IGLV1-51P01701 117 aa13.26□□□□□ -0.29
KLHDC3-201ENST00000244670 RBMY1DP0C7P1 496 aaKnown RBP13.26□□□□□ -0.29
KLHDC3-201ENST00000244670 ZNF705AQ6ZN79 300 aaPredicted RBP13.26□□□□□ -0.29
KLHDC3-201ENST00000244670 PRSS3P2Q8NHM4 247 aa13.26□□□□□ -0.29
KLHDC3-201ENST00000244670 TSPOP30536 169 aa13.25□□□□□ -0.29
KLHDC3-201ENST00000244670 ORMDL3Q8N138 153 aa13.25□□□□□ -0.29
KLHDC3-201ENST00000244670 NCR2O95944 276 aa13.25□□□□□ -0.29
KLHDC3-201ENST00000244670 LBHQ53QV2 105 aaPredicted RBP13.25□□□□□ -0.29
KLHDC3-201ENST00000244670 FA2HQ7L5A8 372 aa13.25□□□□□ -0.29
KLHDC3-201ENST00000244670 ATOH7Q8N100 152 aa13.25□□□□□ -0.29
KLHDC3-201ENST00000244670 PRELID3AQ96N28 172 aa13.25□□□□□ -0.29
KLHDC3-201ENST00000244670 CITED1Q99966 193 aa13.25□□□□□ -0.29
KLHDC3-201ENST00000244670 AP5S1Q9NUS5 200 aa13.25□□□□□ -0.29
KLHDC3-201ENST00000244670 IGHV4-4A0A075B6R2 117 aa13.24□□□□□ -0.29
KLHDC3-201ENST00000244670 S100A4P26447 101 aaKnown RBP13.24□□□□□ -0.29
KLHDC3-201ENST00000244670 ASIPP42127 132 aa13.24□□□□□ -0.29
KLHDC3-201ENST00000244670 FAM159AQ6UWV7 190 aa13.24□□□□□ -0.29
KLHDC3-201ENST00000244670 SPATA3Q8NHX4 192 aa13.24□□□□□ -0.29
KLHDC3-201ENST00000244670 GAS8-AS1O95177 125 aa13.23□□□□□ -0.29
KLHDC3-201ENST00000244670 EVI2AP22794 236 aa13.23□□□□□ -0.29
KLHDC3-201ENST00000244670 MAST4O15021 2626 aa13.23□□□□□ -0.29
KLHDC3-201ENST00000244670 OR11H12B2RN74 326 aa13.23□□□□□ -0.29
KLHDC3-201ENST00000244670 NPYP01303 97 aa13.23□□□□□ -0.29
KLHDC3-201ENST00000244670 CKS2P33552 79 aa13.23□□□□□ -0.29
KLHDC3-201ENST00000244670 SPANXN1Q5VSR9 72 aa13.23□□□□□ -0.29
KLHDC3-201ENST00000244670 NOTCH3Q9UM47 2321 aa13.22□□□□□ -0.29
KLHDC3-201ENST00000244670 CACNG7P62955 275 aa13.22□□□□□ -0.29
KLHDC3-201ENST00000244670 LINC00173Q6ZV60 143 aa13.22□□□□□ -0.29
KLHDC3-201ENST00000244670 LOC389332A0A1B0GUA5 103 aa13.21□□□□□ -0.29
KLHDC3-201ENST00000244670 A8MTW9 85 aa13.21□□□□□ -0.29
KLHDC3-201ENST00000244670 SYS1-DBNDD2H3BUS1 97 aa13.21□□□□□ -0.29
KLHDC3-201ENST00000244670 EREGO14944 169 aa13.21□□□□□ -0.29
KLHDC3-201ENST00000244670 CRXO43186 299 aaPredicted RBP13.21□□□□□ -0.29
KLHDC3-201ENST00000244670 CD7P09564 240 aa13.21□□□□□ -0.29
KLHDC3-201ENST00000244670 RNASE3P12724 160 aaKnown RBP13.21□□□□□ -0.29
KLHDC3-201ENST00000244670 IFI27P40305 119 aaPredicted RBP13.21□□□□□ -0.29
KLHDC3-201ENST00000244670 LURAP1LQ8IV03 231 aa13.21□□□□□ -0.29
KLHDC3-201ENST00000244670 C2orf88Q9BSF0 95 aa13.21□□□□□ -0.29
KLHDC3-201ENST00000244670 HSPB8Q9UJY1 196 aa13.21□□□□□ -0.29
KLHDC3-201ENST00000244670 M0R143 59 aa13.21□□□□□ -0.3
KLHDC3-201ENST00000244670 RBMY1A1P0DJD3 496 aaKnown RBP13.21□□□□□ -0.3
KLHDC3-201ENST00000244670 RBMY1CP0DJD4 496 aa13.21□□□□□ -0.3
KLHDC3-201ENST00000244670 RBMY1FQ15415 496 aaKnown RBP13.21□□□□□ -0.3
KLHDC3-201ENST00000244670 SPATA12Q7Z6I5 190 aa13.21□□□□□ -0.3
KLHDC3-201ENST00000244670 MAP1LC3CQ9BXW4 147 aa13.21□□□□□ -0.3
KLHDC3-201ENST00000244670 SCRT2Q9NQ03 307 aa13.21□□□□□ -0.3
KLHDC3-201ENST00000244670 C20orf202A1L168 122 aa13.2□□□□□ -0.3
KLHDC3-201ENST00000244670 KRTAP24-1Q3LI83 254 aa13.2□□□□□ -0.3
KLHDC3-201ENST00000244670 SNHG12Q9BXW3 62 aa13.2□□□□□ -0.3
KLHDC3-201ENST00000244670 WFDC10AQ9H1F0 79 aa13.2□□□□□ -0.3
KLHDC3-201ENST00000244670 TRAV9-2A0A087WT02 112 aa13.19□□□□□ -0.3
KLHDC3-201ENST00000244670 M0R381 172 aa13.19□□□□□ -0.3
KLHDC3-201ENST00000244670 MED14OSP0DP75 135 aa13.19□□□□□ -0.3
KLHDC3-201ENST00000244670 MAJINQ3KP22 176 aa13.19□□□□□ -0.3
KLHDC3-201ENST00000244670 STHQ8IWL8 128 aa13.19□□□□□ -0.3
KLHDC3-201ENST00000244670 PHLDA3Q9Y5J5 127 aa13.19□□□□□ -0.3
KLHDC3-201ENST00000244670 TRRAPQ9Y4A5 3859 aa13.19□□□□□ -0.3
KLHDC3-201ENST00000244670 MUC4Q99102 2169 aa13.19□□□□□ -0.3
KLHDC3-201ENST00000244670 GATA1P15976 413 aaPredicted RBP13.19□□□□□ -0.3
KLHDC3-201ENST00000244670 OR2K2Q8NGT1 345 aa13.19□□□□□ -0.3
KLHDC3-201ENST00000244670 IGHV1OR15-1A0A075B7D0 117 aa13.18□□□□□ -0.3
KLHDC3-201ENST00000244670 A0A1B0GV90 55 aa13.18□□□□□ -0.3
KLHDC3-201ENST00000244670 UQCR10Q9UDW1 63 aa13.18□□□□□ -0.3
KLHDC3-201ENST00000244670 PPBPP02775 128 aa13.17□□□□□ -0.3
KLHDC3-201ENST00000244670 IGLC3P0DOY3 106 aa13.17□□□□□ -0.3
KLHDC3-201ENST00000244670 BEAN1Q3B7T3 259 aa13.17□□□□□ -0.3
KLHDC3-201ENST00000244670 SMIM15Q7Z3B0 74 aa13.17□□□□□ -0.3
KLHDC3-201ENST00000244670 Q8N1Y9 231 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms