RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CRXO43186 299 aaPredicted RBP9.57□□□□□ -0.88
DDX39A-201ENST00000242776 OR5I1Q13606 314 aa9.57□□□□□ -0.88
DDX39A-201ENST00000242776 FAM162BQ5T6X4 162 aa9.57□□□□□ -0.88
DDX39A-201ENST00000242776 PRR9Q5T870 116 aa9.57□□□□□ -0.88
DDX39A-201ENST00000242776 Q6AWC8 147 aa9.57□□□□□ -0.88
DDX39A-201ENST00000242776 PLAC8L1A1L4L8 177 aa9.56□□□□□ -0.88
DDX39A-201ENST00000242776 F8W036 122 aa9.56□□□□□ -0.88
DDX39A-201ENST00000242776 PFN1P07737 140 aaKnown RBP9.56□□□□□ -0.88
DDX39A-201ENST00000242776 TMEM241Q24JQ0 296 aa9.56□□□□□ -0.88
DDX39A-201ENST00000242776 PRR27Q6MZM9 219 aa9.56□□□□□ -0.88
DDX39A-201ENST00000242776 ZC2HC1AQ96GY0 325 aa9.56□□□□□ -0.88
DDX39A-201ENST00000242776 LINC01587Q99440 93 aa9.56□□□□□ -0.88
DDX39A-201ENST00000242776 CBY3A6NI87 242 aa9.55□□□□□ -0.88
DDX39A-201ENST00000242776 FABP5P3A8MUU1 101 aa9.55□□□□□ -0.88
DDX39A-201ENST00000242776 H7BYZ3 331 aa9.55□□□□□ -0.88
DDX39A-201ENST00000242776 KIR3DS1Q14943 382 aa9.55□□□□□ -0.88
DDX39A-201ENST00000242776 TTC32Q5I0X7 151 aa9.55□□□□□ -0.88
DDX39A-201ENST00000242776 Q5VSD8 79 aa9.55□□□□□ -0.88
DDX39A-201ENST00000242776 DAZAP1Q96EP5 407 aaKnown RBP9.55□□□□□ -0.88
DDX39A-201ENST00000242776 SEC11CQ9BY50 192 aa9.55□□□□□ -0.88
DDX39A-201ENST00000242776 TRAV26-1A0A087WT03 109 aa9.54□□□□□ -0.88
DDX39A-201ENST00000242776 PGPEP1LA6NFU8 196 aa9.54□□□□□ -0.88
DDX39A-201ENST00000242776 SH2D1AO60880 128 aa9.54□□□□□ -0.88
DDX39A-201ENST00000242776 IGLV2-8P01709 118 aa9.54□□□□□ -0.88
DDX39A-201ENST00000242776 LINC01551Q86U37 167 aa9.54□□□□□ -0.88
DDX39A-201ENST00000242776 OCC1Q8TAD7 63 aa9.54□□□□□ -0.88
DDX39A-201ENST00000242776 PYGO2Q9BRQ0 406 aa9.54□□□□□ -0.88
DDX39A-201ENST00000242776 NOP10Q9NPE3 64 aaKnown RBP9.54□□□□□ -0.88
DDX39A-201ENST00000242776 FAT1Q14517 4588 aa9.54□□□□□ -0.88
DDX39A-201ENST00000242776 FLG2Q5D862 2391 aaPredicted RBP9.54□□□□□ -0.88
DDX39A-201ENST00000242776 ZNF324O75467 553 aaPredicted RBP9.53□□□□□ -0.88
DDX39A-201ENST00000242776 ZNF80P51504 273 aaPredicted RBP9.53□□□□□ -0.88
DDX39A-201ENST00000242776 PNRC1Q12796 327 aaPredicted RBP9.53□□□□□ -0.88
DDX39A-201ENST00000242776 ADIRFQ15847 76 aa9.53□□□□□ -0.88
DDX39A-201ENST00000242776 FAM159AQ6UWV7 190 aa9.53□□□□□ -0.88
DDX39A-201ENST00000242776 KCNS1Q96KK3 526 aa9.53□□□□□ -0.88
DDX39A-201ENST00000242776 SDF2L1Q9HCN8 221 aa9.53□□□□□ -0.88
DDX39A-201ENST00000242776 MDFICQ9P1T7 246 aa9.53□□□□□ -0.88
DDX39A-201ENST00000242776 NAGKQ9UJ70 344 aa9.53□□□□□ -0.88
DDX39A-201ENST00000242776 IGHV1OR15-1A0A075B7D0 117 aa9.53□□□□□ -0.88
DDX39A-201ENST00000242776 SMR3BP02814 79 aaPredicted RBP9.53□□□□□ -0.88
DDX39A-201ENST00000242776 ESRGQ1W209 222 aa9.53□□□□□ -0.88
DDX39A-201ENST00000242776 FRZBQ92765 325 aa9.53□□□□□ -0.88
DDX39A-201ENST00000242776 KRBOX1C9JBD0 128 aa9.52□□□□□ -0.89
DDX39A-201ENST00000242776 K7EN84 100 aa9.52□□□□□ -0.89
DDX39A-201ENST00000242776 P01737 135 aa9.52□□□□□ -0.89
DDX39A-201ENST00000242776 ORM1P02763 201 aa9.52□□□□□ -0.89
DDX39A-201ENST00000242776 ADCYAP1P18509 176 aa9.52□□□□□ -0.89
DDX39A-201ENST00000242776 XGP55808 180 aa9.52□□□□□ -0.89
DDX39A-201ENST00000242776 LINC00315P59091 139 aa9.52□□□□□ -0.89
DDX39A-201ENST00000242776 RPL23P62829 140 aaKnown RBP9.52□□□□□ -0.89
DDX39A-201ENST00000242776 IBA57Q5T440 356 aaKnown RBP9.52□□□□□ -0.89
DDX39A-201ENST00000242776 SLC7A5P1Q8MH63 180 aa9.52□□□□□ -0.89
DDX39A-201ENST00000242776 LINC00467Q9BRT7 94 aa9.52□□□□□ -0.89
DDX39A-201ENST00000242776 TRGV11A0A075B6L2 103 aa9.51□□□□□ -0.89
DDX39A-201ENST00000242776 BTF3P20290 206 aaKnown RBP9.51□□□□□ -0.89
DDX39A-201ENST00000242776 CRIP1P50238 77 aa9.51□□□□□ -0.89
DDX39A-201ENST00000242776 ERVFC1-1P60608 527 aa9.51□□□□□ -0.89
DDX39A-201ENST00000242776 HAMPP81172 84 aa9.51□□□□□ -0.89
DDX39A-201ENST00000242776 LINC01559Q495D7 138 aa9.51□□□□□ -0.89
DDX39A-201ENST00000242776 MUC21Q5SSG8 566 aa9.51□□□□□ -0.89
DDX39A-201ENST00000242776 FAM231DQ6ZW35 169 aa9.51□□□□□ -0.89
DDX39A-201ENST00000242776 C15orf54Q8N8G6 183 aa9.51□□□□□ -0.89
DDX39A-201ENST00000242776 ISOC2Q96AB3 205 aa9.51□□□□□ -0.89
DDX39A-201ENST00000242776 TIMM8BQ9Y5J9 83 aaPredicted RBP9.51□□□□□ -0.89
DDX39A-201ENST00000242776 XKRY2A2RUG3 117 aa9.5□□□□□ -0.89
DDX39A-201ENST00000242776 C19orf71A6NCJ1 209 aa9.5□□□□□ -0.89
DDX39A-201ENST00000242776 B4DEV8 164 aa9.5□□□□□ -0.89
DDX39A-201ENST00000242776 TDRG1Q3Y452 100 aa9.5□□□□□ -0.89
DDX39A-201ENST00000242776 C16orf74Q96GX8 76 aa9.5□□□□□ -0.89
DDX39A-201ENST00000242776 CARHSP1Q9Y2V2 147 aaKnown RBP9.5□□□□□ -0.89
DDX39A-201ENST00000242776 MYCBP2O75592 4640 aa9.5□□□□□ -0.89
DDX39A-201ENST00000242776 GAGE12BA1L429 117 aa9.49□□□□□ -0.89
DDX39A-201ENST00000242776 GATCO43716 136 aaKnown RBP9.49□□□□□ -0.89
DDX39A-201ENST00000242776 GAGE7O76087 117 aa9.49□□□□□ -0.89
DDX39A-201ENST00000242776 GAGE12FP0CL80 117 aa9.49□□□□□ -0.89
DDX39A-201ENST00000242776 GAGE12GP0CL81 117 aa9.49□□□□□ -0.89
DDX39A-201ENST00000242776 GAGE12IP0CL82 117 aa9.49□□□□□ -0.89
DDX39A-201ENST00000242776 HOXA5P20719 270 aa9.49□□□□□ -0.89
DDX39A-201ENST00000242776 RPS20P60866 119 aaKnown RBP9.49□□□□□ -0.89
DDX39A-201ENST00000242776 ANXA2RQ3ZCQ2 193 aa9.49□□□□□ -0.89
DDX39A-201ENST00000242776 C10orf91Q5T1B1 145 aa9.49□□□□□ -0.89
DDX39A-201ENST00000242776 NUDT10Q8NFP7 164 aa9.49□□□□□ -0.89
DDX39A-201ENST00000242776 TMEM263Q8WUH6 116 aaKnown RBP9.49□□□□□ -0.89
DDX39A-201ENST00000242776 NUDT11Q96G61 164 aa9.49□□□□□ -0.89
DDX39A-201ENST00000242776 SFRP2Q96HF1 295 aa9.49□□□□□ -0.89
DDX39A-201ENST00000242776 RNASE7Q9H1E1 156 aaKnown RBP9.49□□□□□ -0.89
DDX39A-201ENST00000242776 OSTCQ9NRP0 149 aa9.49□□□□□ -0.89
DDX39A-201ENST00000242776 TNFRSF18Q9Y5U5 241 aa9.49□□□□□ -0.89
DDX39A-201ENST00000242776 VPS13BQ7Z7G8 4022 aa9.49□□□□□ -0.89
DDX39A-201ENST00000242776 M0R036 132 aa9.48□□□□□ -0.89
DDX39A-201ENST00000242776 CXCL1P09341 107 aa9.48□□□□□ -0.89
DDX39A-201ENST00000242776 ZNF415Q09FC8 603 aa9.48□□□□□ -0.89
DDX39A-201ENST00000242776 Q6ZQT7 251 aa9.48□□□□□ -0.89
DDX39A-201ENST00000242776 ZNF493Q6ZR52 646 aa9.48□□□□□ -0.89
DDX39A-201ENST00000242776 OR2D3Q8NGH3 330 aa9.48□□□□□ -0.89
DDX39A-201ENST00000242776 C18orf15Q96N68 181 aa9.48□□□□□ -0.89
DDX39A-201ENST00000242776 RPP21Q9H633 154 aaKnown RBP9.48□□□□□ -0.89
DDX39A-201ENST00000242776 C11orf21Q9P2W6 132 aa9.48□□□□□ -0.89
DDX39A-201ENST00000242776 MRPS16Q9Y3D3 137 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms