RNA–Protein interactions for RNA: ENST00000233025.11

SPCS1-201, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 1,082 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-201ENST00000233025 ICOSQ9Y6W8 199 aa10.92□□□□□ -0.66
SPCS1-201ENST00000233025 TRAV12-3A0A0B4J271 114 aa10.91□□□□□ -0.66
SPCS1-201ENST00000233025 F6UZH7 168 aa10.91□□□□□ -0.66
SPCS1-201ENST00000233025 TMEM250H0YL14 139 aa10.91□□□□□ -0.66
SPCS1-201ENST00000233025 M0R036 132 aa10.91□□□□□ -0.66
SPCS1-201ENST00000233025 PSCAO43653 123 aa10.91□□□□□ -0.66
SPCS1-201ENST00000233025 PDE6DO43924 150 aa10.91□□□□□ -0.66
SPCS1-201ENST00000233025 OR7C2O60412 319 aa10.91□□□□□ -0.66
SPCS1-201ENST00000233025 NDUFB4O95168 129 aa10.91□□□□□ -0.66
SPCS1-201ENST00000233025 LEPP41159 167 aa10.91□□□□□ -0.66
SPCS1-201ENST00000233025 HNRNPA3P51991 378 aaKnown RBP10.91□□□□□ -0.66
SPCS1-201ENST00000233025 DAZ2Q13117 558 aaKnown RBP10.91□□□□□ -0.66
SPCS1-201ENST00000233025 CST9LP1Q5W188 147 aa10.91□□□□□ -0.66
SPCS1-201ENST00000233025 Q6ZTI0 123 aa10.91□□□□□ -0.66
SPCS1-201ENST00000233025 MIR17HGQ75NE6 70 aa10.91□□□□□ -0.66
SPCS1-201ENST00000233025 CYB561D1Q8N8Q1 229 aa10.91□□□□□ -0.66
SPCS1-201ENST00000233025 MRPL53Q96EL3 112 aaKnown RBP10.91□□□□□ -0.66
SPCS1-201ENST00000233025 PYGO2Q9BRQ0 406 aa10.91□□□□□ -0.66
SPCS1-201ENST00000233025 ARL2-SNX15V9GYD0 113 aa10.91□□□□□ -0.66
SPCS1-201ENST00000233025 TRBV19A0A075B6N1 114 aa10.9□□□□□ -0.66
SPCS1-201ENST00000233025 SNURFLB1AK76 121 aa10.9□□□□□ -0.66
SPCS1-201ENST00000233025 SCO1O75880 301 aa10.9□□□□□ -0.66
SPCS1-201ENST00000233025 EVI2AP22794 236 aa10.9□□□□□ -0.66
SPCS1-201ENST00000233025 FAM74A3Q4VXF1 159 aa10.9□□□□□ -0.66
SPCS1-201ENST00000233025 C11orf72Q8NBR9 251 aa10.9□□□□□ -0.66
SPCS1-201ENST00000233025 CLRN3Q8NCR9 226 aa10.9□□□□□ -0.66
SPCS1-201ENST00000233025 FAM19A4Q96LR4 140 aa10.9□□□□□ -0.66
SPCS1-201ENST00000233025 TMEM14CQ9P0S9 112 aa10.9□□□□□ -0.66
SPCS1-201ENST00000233025 KLLNB2CW77 178 aa10.89□□□□□ -0.67
SPCS1-201ENST00000233025 UBE2G2P60604 165 aa10.89□□□□□ -0.67
SPCS1-201ENST00000233025 ERCC8Q13216 396 aa10.89□□□□□ -0.67
SPCS1-201ENST00000233025 TVP23CQ96ET8 276 aa10.89□□□□□ -0.67
SPCS1-201ENST00000233025 C7orf71A4D174 169 aa10.88□□□□□ -0.67
SPCS1-201ENST00000233025 SLC25A5P05141 298 aaKnown RBP10.88□□□□□ -0.67
SPCS1-201ENST00000233025 CRYGDP07320 174 aa10.88□□□□□ -0.67
SPCS1-201ENST00000233025 PYYP10082 97 aa10.88□□□□□ -0.67
SPCS1-201ENST00000233025 BTN1A1Q13410 526 aa10.88□□□□□ -0.67
SPCS1-201ENST00000233025 PAXXQ9BUH6 204 aa10.88□□□□□ -0.67
SPCS1-201ENST00000233025 ZNF727A8MUV8 499 aa10.87□□□□□ -0.67
SPCS1-201ENST00000233025 ZNF324O75467 553 aaPredicted RBP10.87□□□□□ -0.67
SPCS1-201ENST00000233025 HIST1H1EP10412 219 aaKnown RBP10.87□□□□□ -0.67
SPCS1-201ENST00000233025 PNRC1Q12796 327 aaPredicted RBP10.87□□□□□ -0.67
SPCS1-201ENST00000233025 PDE6HQ13956 83 aa10.87□□□□□ -0.67
SPCS1-201ENST00000233025 RHEBQ15382 184 aa10.87□□□□□ -0.67
SPCS1-201ENST00000233025 ATRAIDQ6UW56 229 aa10.87□□□□□ -0.67
SPCS1-201ENST00000233025 C10orf126Q8N4M7 172 aa10.87□□□□□ -0.67
SPCS1-201ENST00000233025 OR51M1Q9H341 326 aa10.87□□□□□ -0.67
SPCS1-201ENST00000233025 RPS10P5Q9NQ39 176 aa10.87□□□□□ -0.67
SPCS1-201ENST00000233025 PAX4O43316 350 aa10.86□□□□□ -0.67
SPCS1-201ENST00000233025 UBE2L3P68036 154 aaKnown RBP10.86□□□□□ -0.67
SPCS1-201ENST00000233025 EXOC3-AS1Q8N2X6 119 aa10.86□□□□□ -0.67
SPCS1-201ENST00000233025 ZFAND2AQ8N6M9 145 aa10.86□□□□□ -0.67
SPCS1-201ENST00000233025 FAM167A-AS1Q96KT0 104 aa10.86□□□□□ -0.67
SPCS1-201ENST00000233025 SMIM7Q9BQ49 75 aa10.86□□□□□ -0.67
SPCS1-201ENST00000233025 SLC25A2Q9BXI2 301 aa10.86□□□□□ -0.67
SPCS1-201ENST00000233025 AGPAT4-IT1Q9H0P7 198 aa10.86□□□□□ -0.67
SPCS1-201ENST00000233025 GSN-AS1Q9NRJ2 163 aa10.86□□□□□ -0.67
SPCS1-201ENST00000233025 PRELID1Q9Y255 219 aa10.86□□□□□ -0.67
SPCS1-201ENST00000233025 TRGV2A0A075B6R0 118 aa10.85□□□□□ -0.67
SPCS1-201ENST00000233025 IGKV2-40A0A087WW87 121 aaPredicted RBP10.85□□□□□ -0.67
SPCS1-201ENST00000233025 B4DEV8 164 aa10.85□□□□□ -0.67
SPCS1-201ENST00000233025 IGKV2D-40P01614 121 aaPredicted RBP10.85□□□□□ -0.67
SPCS1-201ENST00000233025 CRISP2P16562 243 aa10.85□□□□□ -0.67
SPCS1-201ENST00000233025 ZNF674Q2M3X9 581 aa10.85□□□□□ -0.67
SPCS1-201ENST00000233025 ANXA2RQ3ZCQ2 193 aa10.85□□□□□ -0.67
SPCS1-201ENST00000233025 PRR9Q5T870 116 aa10.85□□□□□ -0.67
SPCS1-201ENST00000233025 C9orf47Q6ZRZ4 202 aa10.85□□□□□ -0.67
SPCS1-201ENST00000233025 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.85□□□□□ -0.67
SPCS1-201ENST00000233025 LINC00477Q96M19 166 aa10.85□□□□□ -0.67
SPCS1-201ENST00000233025 CHAC1Q9BUX1 264 aa10.85□□□□□ -0.67
SPCS1-201ENST00000233025 NAT8Q9UHE5 227 aa10.85□□□□□ -0.67
SPCS1-201ENST00000233025 A0A1W2PRE2 83 aa10.84□□□□□ -0.67
SPCS1-201ENST00000233025 FAM74A7A6NL05 159 aa10.84□□□□□ -0.67
SPCS1-201ENST00000233025 GHRHP01286 108 aa10.84□□□□□ -0.67
SPCS1-201ENST00000233025 OR10J4P0C629 311 aa10.84□□□□□ -0.67
SPCS1-201ENST00000233025 TCL1AP56279 114 aa10.84□□□□□ -0.67
SPCS1-201ENST00000233025 WFDC2Q14508 124 aa10.84□□□□□ -0.67
SPCS1-201ENST00000233025 TMEM241Q24JQ0 296 aa10.84□□□□□ -0.67
SPCS1-201ENST00000233025 NEGR1Q7Z3B1 354 aa10.84□□□□□ -0.67
SPCS1-201ENST00000233025 DAZAP1Q96EP5 407 aaKnown RBP10.84□□□□□ -0.67
SPCS1-201ENST00000233025 SMCO4Q9NRQ5 59 aa10.84□□□□□ -0.67
SPCS1-201ENST00000233025 KLF12Q9Y4X4 402 aa10.84□□□□□ -0.67
SPCS1-201ENST00000233025 C7orf77A4D0Y5 90 aa10.83□□□□□ -0.68
SPCS1-201ENST00000233025 SPINK4O60575 86 aa10.83□□□□□ -0.68
SPCS1-201ENST00000233025 GAS8-AS1O95177 125 aa10.83□□□□□ -0.68
SPCS1-201ENST00000233025 MRPL23Q16540 153 aaKnown RBP10.83□□□□□ -0.68
SPCS1-201ENST00000233025 Q6ZQT7 251 aa10.83□□□□□ -0.68
SPCS1-201ENST00000233025 CIRBP-AS1Q8TBR5 109 aa10.83□□□□□ -0.68
SPCS1-201ENST00000233025 BLNKQ8WV28 456 aa10.83□□□□□ -0.68
SPCS1-201ENST00000233025 PARLQ9H300 379 aa10.83□□□□□ -0.68
SPCS1-201ENST00000233025 TRGV1A0A0A0MS02 117 aa10.82□□□□□ -0.68
SPCS1-201ENST00000233025 IGLV2-8P01709 118 aa10.82□□□□□ -0.68
SPCS1-201ENST00000233025 LINC01620Q4KN68 170 aa10.82□□□□□ -0.68
SPCS1-201ENST00000233025 IBA57Q5T440 356 aaKnown RBP10.82□□□□□ -0.68
SPCS1-201ENST00000233025 VGLL1Q99990 258 aa10.82□□□□□ -0.68
SPCS1-201ENST00000233025 SDF2L1Q9HCN8 221 aa10.82□□□□□ -0.68
SPCS1-201ENST00000233025 TP53TG3Q9ULZ0 132 aa10.82□□□□□ -0.68
SPCS1-201ENST00000233025 FAT4Q6V0I7 4981 aa10.82□□□□□ -0.68
SPCS1-201ENST00000233025 RNASE4P34096 147 aaKnown RBP10.81□□□□□ -0.68
SPCS1-201ENST00000233025 CRYBA4P53673 196 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms