RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 Q6ZS92 163 aa10.92□□□□□ -0.66
SHPK-201ENST00000225519 TOMM6Q96B49 74 aa10.92□□□□□ -0.66
SHPK-201ENST00000225519 C16orf92Q96LL3 132 aa10.92□□□□□ -0.66
SHPK-201ENST00000225519 FAM90A27PA6NNH2 459 aa10.92□□□□□ -0.66
SHPK-201ENST00000225519 C9JAW5 83 aa10.92□□□□□ -0.66
SHPK-201ENST00000225519 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.92□□□□□ -0.66
SHPK-201ENST00000225519 RAX2Q96IS3 184 aa10.92□□□□□ -0.66
SHPK-201ENST00000225519 TACC2O95359 2948 aa10.91□□□□□ -0.66
SHPK-201ENST00000225519 IGHV7-4-1A0A0J9YVY3 117 aa10.91□□□□□ -0.66
SHPK-201ENST00000225519 CENPEQ02224 2701 aa10.91□□□□□ -0.66
SHPK-201ENST00000225519 UBE2D1P51668 147 aa10.91□□□□□ -0.66
SHPK-201ENST00000225519 GAGE2BQ13066 116 aa10.91□□□□□ -0.66
SHPK-201ENST00000225519 GAGE2EQ4V326 116 aa10.91□□□□□ -0.66
SHPK-201ENST00000225519 NDUFA11Q86Y39 141 aa10.91□□□□□ -0.66
SHPK-201ENST00000225519 GAGE2DQ9UEU5 116 aa10.91□□□□□ -0.66
SHPK-201ENST00000225519 DMXL1Q9Y485 3027 aa10.91□□□□□ -0.66
SHPK-201ENST00000225519 TTC32Q5I0X7 151 aa10.91□□□□□ -0.66
SHPK-201ENST00000225519 CLEC19AQ6UXS0 136 aa10.91□□□□□ -0.66
SHPK-201ENST00000225519 LY6LH3BQJ8 138 aa10.9□□□□□ -0.66
SHPK-201ENST00000225519 RBAKDNA6NC62 111 aa10.9□□□□□ -0.66
SHPK-201ENST00000225519 DPH3P1Q9H4G8 78 aa10.9□□□□□ -0.66
SHPK-201ENST00000225519 BUB3O43684 328 aa10.9□□□□□ -0.67
SHPK-201ENST00000225519 NPBQ8NG41 125 aa10.9□□□□□ -0.67
SHPK-201ENST00000225519 RASL10AQ92737 203 aa10.9□□□□□ -0.67
SHPK-201ENST00000225519 METTL26Q96S19 204 aa10.9□□□□□ -0.67
SHPK-201ENST00000225519 CD3EP07766 207 aa10.89□□□□□ -0.67
SHPK-201ENST00000225519 SMG1Q96Q15 3661 aaKnown RBP10.89□□□□□ -0.67
SHPK-201ENST00000225519 ZZEF1O43149 2961 aa10.89□□□□□ -0.67
SHPK-201ENST00000225519 SLC25A20O43772 301 aa10.89□□□□□ -0.67
SHPK-201ENST00000225519 B9A039 149 aa10.89□□□□□ -0.67
SHPK-201ENST00000225519 DUSP14O95147 198 aaKnown RBP10.89□□□□□ -0.67
SHPK-201ENST00000225519 UBE2D3P61077 147 aa10.89□□□□□ -0.67
SHPK-201ENST00000225519 UBE2D2P62837 147 aa10.89□□□□□ -0.67
SHPK-201ENST00000225519 BEX4Q9NWD9 120 aaPredicted RBP10.89□□□□□ -0.67
SHPK-201ENST00000225519 LGALS3P17931 250 aaKnown RBP10.88□□□□□ -0.67
SHPK-201ENST00000225519 PRO1854Q9UHT4 67 aa10.88□□□□□ -0.67
SHPK-201ENST00000225519 C11orf86A6NJI1 115 aa10.88□□□□□ -0.67
SHPK-201ENST00000225519 F5H697 171 aa10.88□□□□□ -0.67
SHPK-201ENST00000225519 LY6HO94772 140 aa10.88□□□□□ -0.67
SHPK-201ENST00000225519 ASIPP42127 132 aa10.88□□□□□ -0.67
SHPK-201ENST00000225519 HECTD1Q9ULT8 2610 aa10.88□□□□□ -0.67
SHPK-201ENST00000225519 C10orf126Q8N4M7 172 aa10.88□□□□□ -0.67
SHPK-201ENST00000225519 DMXL2Q8TDJ6 3036 aa10.88□□□□□ -0.67
SHPK-201ENST00000225519 CD7P09564 240 aa10.87□□□□□ -0.67
SHPK-201ENST00000225519 RPL11P62913 178 aaKnown RBP10.87□□□□□ -0.67
SHPK-201ENST00000225519 TIMD4Q96H15 378 aa10.87□□□□□ -0.67
SHPK-201ENST00000225519 TP53TG1Q9Y2A0 90 aa10.87□□□□□ -0.67
SHPK-201ENST00000225519 A0A0J9YY99 117 aa10.87□□□□□ -0.67
SHPK-201ENST00000225519 PAPPA-AS1Q5QFB9 102 aa10.87□□□□□ -0.67
SHPK-201ENST00000225519 ANKHD1Q8IWZ3 2542 aaKnown RBP10.86□□□□□ -0.67
SHPK-201ENST00000225519 ADGRG4Q8IZF6 3080 aa10.86□□□□□ -0.67
SHPK-201ENST00000225519 CFC1BP0CG36 223 aa10.86□□□□□ -0.67
SHPK-201ENST00000225519 CFC1P0CG37 223 aa10.86□□□□□ -0.67
SHPK-201ENST00000225519 ZNF672Q499Z4 452 aaPredicted RBP10.86□□□□□ -0.67
SHPK-201ENST00000225519 MSRB2Q9Y3D2 182 aa10.86□□□□□ -0.67
SHPK-201ENST00000225519 IGKV3-7A0A075B6H7 116 aa10.86□□□□□ -0.67
SHPK-201ENST00000225519 TRAV2A0A0B4J234 112 aa10.86□□□□□ -0.67
SHPK-201ENST00000225519 IGHV4-39P01824 125 aa10.85□□□□□ -0.67
SHPK-201ENST00000225519 Q6ZS46 218 aa10.85□□□□□ -0.67
SHPK-201ENST00000225519 TRPT1Q86TN4 253 aaKnown RBP10.85□□□□□ -0.67
SHPK-201ENST00000225519 PSMG3-AS1Q96PY0 264 aa10.85□□□□□ -0.67
SHPK-201ENST00000225519 SONP18583 2426 aaKnown RBP10.85□□□□□ -0.67
SHPK-201ENST00000225519 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.85□□□□□ -0.67
SHPK-201ENST00000225519 IGF1P05019 195 aa10.85□□□□□ -0.67
SHPK-201ENST00000225519 OR10J6PQ8NGY7 276 aa10.85□□□□□ -0.67
SHPK-201ENST00000225519 NTN5Q8WTR8 489 aaPredicted RBP10.85□□□□□ -0.67
SHPK-201ENST00000225519 TRAV21A0A0B4J279 112 aa10.84□□□□□ -0.67
SHPK-201ENST00000225519 RNASE4P34096 147 aaKnown RBP10.84□□□□□ -0.67
SHPK-201ENST00000225519 IGHV3-64A0A075B6Q5 118 aa10.84□□□□□ -0.67
SHPK-201ENST00000225519 PMVKQ15126 192 aa10.84□□□□□ -0.67
SHPK-201ENST00000225519 TLN2Q9Y4G6 2542 aa10.83□□□□□ -0.67
SHPK-201ENST00000225519 IGHV4-4A0A075B6R2 117 aa10.83□□□□□ -0.68
SHPK-201ENST00000225519 IGHV7-81A0A0B4J1V7 117 aa10.83□□□□□ -0.68
SHPK-201ENST00000225519 PPP1R17O96001 155 aa10.83□□□□□ -0.68
SHPK-201ENST00000225519 PRR9Q5T870 116 aa10.83□□□□□ -0.68
SHPK-201ENST00000225519 C1orf122Q6ZSJ8 110 aa10.83□□□□□ -0.68
SHPK-201ENST00000225519 VMO1Q7Z5L0 202 aa10.83□□□□□ -0.68
SHPK-201ENST00000225519 COX6B1P14854 86 aa10.83□□□□□ -0.68
SHPK-201ENST00000225519 ZFAND3Q9H8U3 227 aa10.83□□□□□ -0.68
SHPK-201ENST00000225519 A4D1N5 150 aa10.83□□□□□ -0.68
SHPK-201ENST00000225519 GAGE12JA6NER3 117 aa10.83□□□□□ -0.68
SHPK-201ENST00000225519 GAGE7O76087 117 aa10.83□□□□□ -0.68
SHPK-201ENST00000225519 GAGE12FP0CL80 117 aa10.83□□□□□ -0.68
SHPK-201ENST00000225519 GAGE12GP0CL81 117 aa10.83□□□□□ -0.68
SHPK-201ENST00000225519 GAGE12IP0CL82 117 aa10.83□□□□□ -0.68
SHPK-201ENST00000225519 GAGE4Q13068 117 aa10.83□□□□□ -0.68
SHPK-201ENST00000225519 C9orf47Q6ZRZ4 202 aa10.83□□□□□ -0.68
SHPK-201ENST00000225519 RPL39P62891 51 aaKnown RBP10.82□□□□□ -0.68
SHPK-201ENST00000225519 PIP4P1Q86T03 277 aa10.82□□□□□ -0.68
SHPK-201ENST00000225519 LINC01560Q8TB33 94 aa10.82□□□□□ -0.68
SHPK-201ENST00000225519 CHD6Q8TD26 2715 aa10.82□□□□□ -0.68
SHPK-201ENST00000225519 ABCA2Q9BZC7 2435 aa10.82□□□□□ -0.68
SHPK-201ENST00000225519 J3QQQ9 107 aa10.82□□□□□ -0.68
SHPK-201ENST00000225519 IGHV3-30P01768 117 aa10.82□□□□□ -0.68
SHPK-201ENST00000225519 IGHV3-30-5P0DP03 117 aa10.82□□□□□ -0.68
SHPK-201ENST00000225519 IGFL3Q6UXB1 125 aa10.82□□□□□ -0.68
SHPK-201ENST00000225519 EEF1AKMT3Q96AZ1 226 aa10.82□□□□□ -0.68
SHPK-201ENST00000225519 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.82□□□□□ -0.688e-7■■■□□ 16.5
SHPK-201ENST00000225519 PRB1P04280 392 aa10.82□□□□□ -0.68
SHPK-201ENST00000225519 DEFB1P60022 68 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms