RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 TRAV25A0A0B4J276 109 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 A0A0B4J2C4 111 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 WI2-2373I1.2A0A1W2PRP0 233 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 E9PLD3 99 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 I3L2K1 104 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 COL8A2P25067 703 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 ICOSQ9Y6W8 199 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 WIPF3A6NGB9 483 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 OVOL3O00110 214 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 NDUFC2O95298 119 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 P0C879 139 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 C11orf53Q8IXP5 236 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 TRAV13-1A0A0B4J241 112 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 IGLL5B9A064 214 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 FAM167A-AS1Q96KT0 104 aa3.47□□□□□ -1.85
CHD9-201ENST00000219084 ANXA2RQ3ZCQ2 193 aa3.46□□□□□ -1.85
CHD9-201ENST00000219084 A0A1B0GUS0 222 aa3.46□□□□□ -1.86
CHD9-201ENST00000219084 PRSS29PA6NIE9 313 aa3.46□□□□□ -1.86
CHD9-201ENST00000219084 ATP5EP56381 51 aaPredicted RBP3.46□□□□□ -1.86
CHD9-201ENST00000219084 EGR2P11161 476 aaPredicted RBP3.46□□□□□ -1.86
CHD9-201ENST00000219084 CD33P20138 364 aa3.46□□□□□ -1.86
CHD9-201ENST00000219084 NCOR2Q9Y618 2525 aa3.46□□□□□ -1.86
CHD9-201ENST00000219084 A0A0J9YXY3 114 aa3.46□□□□□ -1.86
CHD9-201ENST00000219084 VPREB3Q9UKI3 123 aa3.46□□□□□ -1.86
CHD9-201ENST00000219084 CRLF1O75462 422 aa3.46□□□□□ -1.86
CHD9-201ENST00000219084 PIP4P1Q86T03 277 aa3.46□□□□□ -1.86
CHD9-201ENST00000219084 BPESC1Q9GZL8 116 aa3.46□□□□□ -1.86
CHD9-201ENST00000219084 FUSP35637 526 aaKnown RBP eCLIP3.46□□□□□ -1.86
CHD9-201ENST00000219084 SPANXB1Q9NS25 103 aaPredicted RBP3.46□□□□□ -1.86
CHD9-201ENST00000219084 IGHV3-73A0A0B4J1V6 119 aa3.46□□□□□ -1.86
CHD9-201ENST00000219084 IGHV1-58A0A0C4DH39 117 aa3.46□□□□□ -1.86
CHD9-201ENST00000219084 A0A1B0GXF2 115 aa3.46□□□□□ -1.86
CHD9-201ENST00000219084 NPC2P61916 151 aa3.46□□□□□ -1.86
CHD9-201ENST00000219084 DYNAPQ8N1N2 210 aa3.46□□□□□ -1.86
CHD9-201ENST00000219084 MDFICQ9P1T7 246 aa3.46□□□□□ -1.86
CHD9-201ENST00000219084 C19orf71A6NCJ1 209 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 DKK2Q9UBU2 259 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 LYNX1G3V0Z9 82 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 LYNX1P0DP58 116 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 SYNJ2BPP57105 145 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 FAM120AOSQ5T036 256 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 IGLV2-14P01704 120 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 DAD1P61803 113 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 DUX4L9Q6RFH8 374 aaPredicted RBP3.45□□□□□ -1.86
CHD9-201ENST00000219084 C15orf53Q8NAA6 179 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 NAA38Q9BRA0 125 aaKnown RBP3.45□□□□□ -1.86
CHD9-201ENST00000219084 MUC6Q6W4X9 2439 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 A0A1W2PRX2 142 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 K7EQD1 137 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 TMEM256-PLSCR3K7ERE1 68 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 CRYGBP07316 175 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 ZFP2Q6ZN57 461 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 F6UB75 175 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 K7EIM0 57 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 FXYD7P58549 80 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 BAALC-AS2P0C853 105 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 DEFB131AP59861 70 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 FOXI1Q12951 378 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 ODF1Q14990 250 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 SPINK13Q1W4C9 94 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 hADV29S1A0JD25 119 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 GPHB5Q86YW7 130 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 IMUPQ9GZP8 106 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 TLN2Q9Y4G6 2542 aa3.45□□□□□ -1.86
CHD9-201ENST00000219084 TRBV10-2A0A0K0K1G8 114 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 K7ERJ3 54 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 BUB3O43684 328 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 U3KQK5 164 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 ZNF503-AS2A6NEH8 195 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 MAJINQ3KP22 176 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 LINC01620Q4KN68 170 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 UBE2DNLQ8IWF7 75 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 BAALCQ8WXS3 180 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 VSIG2Q96IQ7 327 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 MLANAQ16655 118 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 FAM215AQ9Y5M1 114 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 TRBV7-3A0A075B6L6 115 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 TRAV26-2A0A0B4J265 109 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 IGLV2-23P01705 113 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 LINC00205P59089 165 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 TRBV10-1A0A0K0K1A3 114 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 TINCRA0A1B0GVN0 87 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 A4D1N5 150 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 Q8N1Y9 231 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 GTSF1Q8WW33 167 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 UBE2E2Q96LR5 201 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 YPEL4Q96NS1 127 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 TM2D2Q9BX73 214 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 AGPAT4-IT1Q9H0P7 198 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 TAX1BP3O14907 124 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 PSCAO43653 123 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 HTN3P15516 51 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 DKK4Q9UBT3 224 aa3.44□□□□□ -1.86
CHD9-201ENST00000219084 IGKV1-17P01599 117 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 IGHG2P01859 326 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 P0DMU3 169 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 FAM231AP0DMU4 169 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 FAM231CP0DMU5 169 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 NSUN5P1Q3KNT7 163 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 PCP2Q8IVA1 136 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms