RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 Spaca3Q9D9X8 221 aa13.69□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Dnajb12Q9QYI4 376 aaKnown RBP13.69□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Gm20825J3QM67 227 aa13.69□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Pfdn2O70591 154 aa13.69□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Ssty2Q149W4 227 aa13.69□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Gm21394Q497R7 227 aa13.69□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Gm20854Q62461 227 aa13.69□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Tmem212Q8C6V3 187 aa13.69□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Olfr1295Q8VF48 312 aa13.69□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Tmem70Q921N7 253 aa13.69□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Fcrl6A1YIY0 268 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Nxph4G3X9N5 304 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Cd74P04441 279 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Ifna4P07351 186 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Gnb1P62874 340 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Ms4a13Q5FWC3 203 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Pef1Q8BFY6 275 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Olfr802Q8VGJ2 312 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Pdzd11Q9CZG9 140 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 4933414I15RikQ9D4D5 133 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 AcacbE9Q4Z2 2448 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Olfr1458A0A1L1SSD5 307 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 H2-M5A7VMS3 348 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Olfr556E9Q549 324 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 P01787 123 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Mtnd6P03925 172 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Dynlt3P56387 116 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Pdlim4P70271 330 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Zim1Q8C393 579 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Olfr159Q9QZ19 319 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Col13a1Q9R1N9 751 aa13.68□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 BC053393A0A0B4J1F6 192 aa13.67□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Trbv26A0A0B4J1P5 115 aa13.67□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Slc25a29Q8BL03 306 aa13.67□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 GrhprQ91Z53 328 aa13.67□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 CnmdQ9Z1F6 334 aa13.67□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Efnb3O35393 340 aa13.67□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Hoxa1P09022 331 aa13.67□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Klk1b22P15948 259 aa13.67□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Gls2Q571F8 602 aa13.67□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 EtdQ80SW5 59 aa13.67□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Rwdd3Q8VIL2 267 aa13.67□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Vmn1r50Q9EP51 310 aa13.67□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 F5O88783 2183 aa13.67□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Nsun4C4P6S0 806 aaKnown RBP13.67□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Slc25a17O70579 307 aa13.67□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Hmx3P42581 356 aa13.67□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Olfr491Q8VG06 310 aa13.67□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Pkd1l2Q7TN88 2461 aa13.66□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Ighv1-7A0A075B5T7 117 aa13.66□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Trav17A0A075B655 113 aa13.66□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Cd5P13379 494 aa13.66□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Prss44Q402U7 372 aa13.66□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Gm5129F6YHA9 99 aa13.66□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Meox2P32443 303 aa13.66□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Tmprss11dQ8VHK8 417 aa13.66□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Tmem126bQ9D1R1 230 aa13.66□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Q9D9C7 252 aa13.66□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Scp2d1Q9DAH1 156 aa13.66□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Mrps11Q9DCA2 191 aaKnown RBP13.66□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Mrps21P58059 87 aa13.65□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Dlx6P70397 175 aa13.65□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Fam78bQ8BQN5 261 aa13.65□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Olfr435Q8VFS3 313 aa13.65□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Shisal2bQ9D1Y9 158 aa13.65□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Tmem190Q9D2E9 166 aa13.65□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Mlst8Q9DCJ1 326 aa13.65□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Rab33bO35963 229 aa13.65□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Sf3a2Q62203 475 aaKnown RBP13.65□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 AdtrpQ8C138 230 aa13.65□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Gm10309Q8C648 119 aa13.65□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Stpg2Q8C8J0 561 aa13.65□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Tmem239Q9DA47 151 aa13.65□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Cep250Q60952 2414 aa13.65□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Col6a4A2AX52 2309 aa13.65□□□□□ -0.22
Sec61a1-201ENSMUST00000032168 Olfr466E9Q2B9 308 aa13.65□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 P04943 107 aa13.65□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Hist1h2bmP10854 126 aa13.65□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Rpl8P62918 257 aaKnown RBP13.65□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Hist1h2bhQ64478 126 aa13.65□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Hist2h2bbQ64525 126 aa13.65□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Hist1h2bcQ6ZWY9 126 aaKnown RBP13.65□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Derl1Q99J56 251 aa13.65□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 AU041133A0A0J9YVH3 498 aa13.64□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Olfr1454Q8VFW2 307 aa13.64□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 BlnkQ9QUN3 457 aa13.64□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Il3raP26952 396 aa13.64□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Olfr1382Q7TQT3 311 aa13.64□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Olfr43Q7TRX1 313 aa13.64□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Arl6ip6Q8BH07 226 aa13.64□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Olfr1272Q8VGN8 308 aa13.64□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Ubr5Q80TP3 2792 aa13.64□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Gm10665K7N6B7 321 aa13.63□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 IappP12968 93 aa13.63□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 CrygcQ61597 174 aa13.63□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Olfr124Q8VGW6 315 aa13.63□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Stard4Q99JV5 224 aa13.63□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Olfr154Q9QY00 318 aa13.63□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Csmd2V9GX34 3611 aa13.63□□□□□ -0.23
Sec61a1-201ENSMUST00000032168 Ep300B2RWS6 2412 aa13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 62.4 ms