RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 TPPP3Q9BW30 176 aa7.26□□□□□ -1.25
PHGDH-215ENST00000641371 TMEM191AQ9H0A3 160 aa7.26□□□□□ -1.25
PHGDH-215ENST00000641371 LAMTOR2Q9Y2Q5 125 aa7.26□□□□□ -1.25
PHGDH-215ENST00000641371 TMSB15BA0A087X1C1 80 aa7.25□□□□□ -1.25
PHGDH-215ENST00000641371 LOC102724200A0A096LPH7 203 aaPredicted RBP7.25□□□□□ -1.25
PHGDH-215ENST00000641371 ADARB2-AS1A8MUL3 147 aa7.25□□□□□ -1.25
PHGDH-215ENST00000641371 F6UB75 175 aa7.25□□□□□ -1.25
PHGDH-215ENST00000641371 SMIM6P0DI80 62 aa7.25□□□□□ -1.25
PHGDH-215ENST00000641371 SRIP30626 198 aa7.25□□□□□ -1.25
PHGDH-215ENST00000641371 RNASE4P34096 147 aaKnown RBP7.25□□□□□ -1.25
PHGDH-215ENST00000641371 AKR1D1P51857 326 aa7.25□□□□□ -1.25
PHGDH-215ENST00000641371 DEFB131AP59861 70 aa7.25□□□□□ -1.25
PHGDH-215ENST00000641371 SLAQ13239 276 aa7.25□□□□□ -1.25
PHGDH-215ENST00000641371 TWIST1Q15672 202 aa7.25□□□□□ -1.25
PHGDH-215ENST00000641371 NSUN5P1Q3KNT7 163 aa7.25□□□□□ -1.25
PHGDH-215ENST00000641371 Q71RC1 249 aaPredicted RBP7.25□□□□□ -1.25
PHGDH-215ENST00000641371 DUX3Q96PT4 197 aa7.25□□□□□ -1.25
PHGDH-215ENST00000641371 MAP6D1Q9H9H5 199 aa7.25□□□□□ -1.25
PHGDH-215ENST00000641371 ZNF256Q9Y2P7 627 aaPredicted RBP7.25□□□□□ -1.25
PHGDH-215ENST00000641371 SETD2Q9BYW2 2564 aaPredicted RBP7.25□□□□□ -1.25
PHGDH-215ENST00000641371 TRGV11A0A075B6L2 103 aa7.24□□□□□ -1.25
PHGDH-215ENST00000641371 OR11H12B2RN74 326 aa7.24□□□□□ -1.25
PHGDH-215ENST00000641371 H3BMM0 161 aa7.24□□□□□ -1.25
PHGDH-215ENST00000641371 SAP30O75446 220 aa7.24□□□□□ -1.25
PHGDH-215ENST00000641371 IGLV1-51P01701 117 aa7.24□□□□□ -1.25
PHGDH-215ENST00000641371 ZNF705DP0CH99 300 aaPredicted RBP7.24□□□□□ -1.25
PHGDH-215ENST00000641371 ZNF705BP0CI00 300 aaPredicted RBP7.24□□□□□ -1.25
PHGDH-215ENST00000641371 RAB4AP20338 218 aa7.24□□□□□ -1.25
PHGDH-215ENST00000641371 PMCHP20382 165 aa7.24□□□□□ -1.25
PHGDH-215ENST00000641371 NUTF2P61970 127 aaKnown RBP7.24□□□□□ -1.25
PHGDH-215ENST00000641371 SPANXN1Q5VSR9 72 aa7.24□□□□□ -1.25
PHGDH-215ENST00000641371 FAM104BQ5XKR9 115 aa7.24□□□□□ -1.25
PHGDH-215ENST00000641371 ALKBH7Q9BT30 221 aaPredicted RBP7.24□□□□□ -1.25
PHGDH-215ENST00000641371 MCRIP2Q9BUT9 160 aaKnown RBP7.24□□□□□ -1.25
PHGDH-215ENST00000641371 FN1P02751 2386 aaKnown RBP7.23□□□□□ -1.25
PHGDH-215ENST00000641371 NTF3P20783 257 aa7.23□□□□□ -1.25
PHGDH-215ENST00000641371 ANXA2RQ3ZCQ2 193 aa7.23□□□□□ -1.25
PHGDH-215ENST00000641371 GDF5OSQ5U4N7 250 aa7.23□□□□□ -1.25
PHGDH-215ENST00000641371 ORMDL3Q8N138 153 aa7.23□□□□□ -1.25
PHGDH-215ENST00000641371 CHCHD1Q96BP2 118 aaKnown RBP7.23□□□□□ -1.25
PHGDH-215ENST00000641371 LINC00467Q9BRT7 94 aa7.23□□□□□ -1.25
PHGDH-215ENST00000641371 NAGKQ9UJ70 344 aa7.23□□□□□ -1.25
PHGDH-215ENST00000641371 PHLDA3Q9Y5J5 127 aa7.23□□□□□ -1.25
PHGDH-215ENST00000641371 HIVEP1P15822 2718 aa7.23□□□□□ -1.25
PHGDH-215ENST00000641371 IGHV1OR15-1A0A075B7D0 117 aa7.22□□□□□ -1.25
PHGDH-215ENST00000641371 GRIFINA4D1Z8 144 aa7.22□□□□□ -1.25
PHGDH-215ENST00000641371 ZNF324O75467 553 aaPredicted RBP7.22□□□□□ -1.25
PHGDH-215ENST00000641371 PPP1R17O96001 155 aa7.22□□□□□ -1.25
PHGDH-215ENST00000641371 CD33P20138 364 aa7.22□□□□□ -1.25
PHGDH-215ENST00000641371 PIK3CD-AS1Q5SR53 167 aa7.22□□□□□ -1.25
PHGDH-215ENST00000641371 PRR9Q5T870 116 aa7.22□□□□□ -1.25
PHGDH-215ENST00000641371 C9orf66Q5T8R8 295 aa7.22□□□□□ -1.25
PHGDH-215ENST00000641371 GFI1BQ5VTD9 330 aa7.22□□□□□ -1.25
PHGDH-215ENST00000641371 AMTNQ6UX39 209 aa7.22□□□□□ -1.25
PHGDH-215ENST00000641371 STHQ8IWL8 128 aa7.22□□□□□ -1.25
PHGDH-215ENST00000641371 TMEM256Q8N2U0 113 aa7.22□□□□□ -1.25
PHGDH-215ENST00000641371 LINC00482Q8N8I6 264 aa7.22□□□□□ -1.25
PHGDH-215ENST00000641371 SYT8Q8NBV8 401 aa7.22□□□□□ -1.25
PHGDH-215ENST00000641371 C18orf32Q8TCD1 76 aa7.22□□□□□ -1.25
PHGDH-215ENST00000641371 CITED1Q99966 193 aa7.22□□□□□ -1.25
PHGDH-215ENST00000641371 SCRT2Q9NQ03 307 aa7.22□□□□□ -1.25
PHGDH-215ENST00000641371 C11orf21Q9P2W6 132 aa7.22□□□□□ -1.25
PHGDH-215ENST00000641371 NXPH4O95158 308 aa7.21□□□□□ -1.26
PHGDH-215ENST00000641371 INSP01308 110 aa7.21□□□□□ -1.26
PHGDH-215ENST00000641371 FRMD6-AS1P0C7T7 363 aa7.21□□□□□ -1.26
PHGDH-215ENST00000641371 BEAN1Q3B7T3 259 aa7.21□□□□□ -1.26
PHGDH-215ENST00000641371 KIAA1644Q3SXP7 199 aa7.21□□□□□ -1.26
PHGDH-215ENST00000641371 AP1S3Q96PC3 154 aa7.21□□□□□ -1.26
PHGDH-215ENST00000641371 HIST1H2BLQ99880 126 aa7.21□□□□□ -1.26
PHGDH-215ENST00000641371 NDUFAF3Q9BU61 184 aa7.21□□□□□ -1.26
PHGDH-215ENST00000641371 SAMD10Q9BYL1 202 aa7.21□□□□□ -1.26
PHGDH-215ENST00000641371 TP53TG3Q9ULZ0 132 aa7.21□□□□□ -1.26
PHGDH-215ENST00000641371 U3KQK5 164 aa7.21□□□□□ -1.26
PHGDH-215ENST00000641371 F8P00451 2351 aa7.21□□□□□ -1.26
PHGDH-215ENST00000641371 WNK1Q9H4A3 2382 aa7.21□□□□□ -1.26
PHGDH-215ENST00000641371 NF1P21359 2839 aa7.21□□□□□ -1.26
PHGDH-215ENST00000641371 TRAV12-3A0A0B4J271 114 aa7.2□□□□□ -1.26
PHGDH-215ENST00000641371 H3BVH4 76 aa7.2□□□□□ -1.26
PHGDH-215ENST00000641371 J3KRW8 73 aa7.2□□□□□ -1.26
PHGDH-215ENST00000641371 HSBP1O75506 76 aa7.2□□□□□ -1.26
PHGDH-215ENST00000641371 SERF1AO75920 110 aa7.2□□□□□ -1.26
PHGDH-215ENST00000641371 CD7P09564 240 aa7.2□□□□□ -1.26
PHGDH-215ENST00000641371 PRB4P10163 310 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-215ENST00000641371 FABP4P15090 132 aa7.2□□□□□ -1.26
PHGDH-215ENST00000641371 SPINK13Q1W4C9 94 aa7.2□□□□□ -1.26
PHGDH-215ENST00000641371 ODF3L2Q3SX64 289 aa7.2□□□□□ -1.26
PHGDH-215ENST00000641371 MORN3Q6PF18 240 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-215ENST00000641371 ZNF575Q86XF7 245 aa7.2□□□□□ -1.26
PHGDH-215ENST00000641371 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-215ENST00000641371 PTH2Q96A98 100 aa7.2□□□□□ -1.26
PHGDH-215ENST00000641371 MRAP2Q96G30 205 aa7.2□□□□□ -1.26
PHGDH-215ENST00000641371 C1QTNF4Q9BXJ3 329 aa7.2□□□□□ -1.26
PHGDH-215ENST00000641371 DPH3P1Q9H4G8 78 aa7.2□□□□□ -1.26
PHGDH-215ENST00000641371 KNCNA6PVL3 124 aa7.19□□□□□ -1.26
PHGDH-215ENST00000641371 SMIM17P0DL12 118 aa7.19□□□□□ -1.26
PHGDH-215ENST00000641371 CKS2P33552 79 aa7.19□□□□□ -1.26
PHGDH-215ENST00000641371 DEFB1P60022 68 aa7.19□□□□□ -1.26
PHGDH-215ENST00000641371 LINC00518Q8N0U6 118 aa7.19□□□□□ -1.26
PHGDH-215ENST00000641371 OR10D4PQ8NGN7 298 aa7.19□□□□□ -1.26
PHGDH-215ENST00000641371 PRELID3AQ96N28 172 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms