RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 HOXD3P31249 432 aaPredicted RBP12.45□□□□□ -0.42
CTSD-213ENST00000637915 MIEN1Q9BRT3 115 aa12.45□□□□□ -0.42
CTSD-213ENST00000637915 MS4A6AQ9H2W1 248 aa12.45□□□□□ -0.42
CTSD-213ENST00000637915 ZMAT5Q9UDW3 170 aaKnown RBP12.45□□□□□ -0.42
CTSD-213ENST00000637915 KIR3DS1Q14943 382 aa12.45□□□□□ -0.42
CTSD-213ENST00000637915 IGHV4-4A0A075B6R2 117 aa12.44□□□□□ -0.42
CTSD-213ENST00000637915 H3BVH4 76 aa12.44□□□□□ -0.42
CTSD-213ENST00000637915 PPBPP02775 128 aa12.44□□□□□ -0.42
CTSD-213ENST00000637915 HSPB8Q9UJY1 196 aa12.44□□□□□ -0.42
CTSD-213ENST00000637915 PDZD2O15018 2839 aa12.44□□□□□ -0.42
CTSD-213ENST00000637915 A0A096LNJ9 63 aa12.43□□□□□ -0.42
CTSD-213ENST00000637915 GAS8-AS1O95177 125 aa12.43□□□□□ -0.42
CTSD-213ENST00000637915 RNASE4P34096 147 aaKnown RBP12.43□□□□□ -0.42
CTSD-213ENST00000637915 MAJINQ3KP22 176 aa12.43□□□□□ -0.42
CTSD-213ENST00000637915 LBHQ53QV2 105 aaPredicted RBP12.43□□□□□ -0.42
CTSD-213ENST00000637915 EVI2AP22794 236 aa12.43□□□□□ -0.42
CTSD-213ENST00000637915 TFPI2P48307 235 aa12.43□□□□□ -0.42
CTSD-213ENST00000637915 CACNG7P62955 275 aa12.43□□□□□ -0.42
CTSD-213ENST00000637915 KLHDC1Q8N7A1 406 aa12.43□□□□□ -0.42
CTSD-213ENST00000637915 MAP1LC3CQ9BXW4 147 aa12.43□□□□□ -0.42
CTSD-213ENST00000637915 TIMM8BQ9Y5J9 83 aaPredicted RBP12.43□□□□□ -0.42
CTSD-213ENST00000637915 TCF21O43680 179 aa12.42□□□□□ -0.42
CTSD-213ENST00000637915 SPANXN1Q5VSR9 72 aa12.42□□□□□ -0.42
CTSD-213ENST00000637915 ZNF705AQ6ZN79 300 aaPredicted RBP12.42□□□□□ -0.42
CTSD-213ENST00000637915 C18orf65Q6ZTR6 163 aa12.42□□□□□ -0.42
CTSD-213ENST00000637915 ANXA2RQ3ZCQ2 193 aa12.41□□□□□ -0.42
CTSD-213ENST00000637915 TMEM86BQ8N661 226 aa12.41□□□□□ -0.42
CTSD-213ENST00000637915 TEX29Q8N6K0 151 aa12.41□□□□□ -0.42
CTSD-213ENST00000637915 ZNF747Q9BV97 191 aa12.41□□□□□ -0.42
CTSD-213ENST00000637915 LAMTOR2Q9Y2Q5 125 aa12.41□□□□□ -0.42
CTSD-213ENST00000637915 TRAV9-2A0A087WT02 112 aa12.41□□□□□ -0.42
CTSD-213ENST00000637915 KLLNB2CW77 178 aa12.41□□□□□ -0.42
CTSD-213ENST00000637915 K7EQG2 157 aa12.41□□□□□ -0.42
CTSD-213ENST00000637915 EREGO14944 169 aa12.41□□□□□ -0.42
CTSD-213ENST00000637915 ZNF688P0C7X2 276 aa12.41□□□□□ -0.42
CTSD-213ENST00000637915 OR4C46A6NHA9 309 aa12.4□□□□□ -0.42
CTSD-213ENST00000637915 TNFRSF6BO95407 300 aa12.4□□□□□ -0.42
CTSD-213ENST00000637915 IGLC3P0DOY3 106 aa12.4□□□□□ -0.42
CTSD-213ENST00000637915 DEFB136Q30KP8 78 aa12.4□□□□□ -0.42
CTSD-213ENST00000637915 PSMG4Q5JS54 123 aa12.4□□□□□ -0.42
CTSD-213ENST00000637915 PET117Q6UWS5 81 aa12.4□□□□□ -0.42
CTSD-213ENST00000637915 SMIM15Q7Z3B0 74 aa12.4□□□□□ -0.42
CTSD-213ENST00000637915 MAP1LC3AQ9H492 121 aa12.4□□□□□ -0.42
CTSD-213ENST00000637915 FLNAP21333 2647 aaKnown RBP12.4□□□□□ -0.43
CTSD-213ENST00000637915 C20orf202A1L168 122 aa12.39□□□□□ -0.43
CTSD-213ENST00000637915 GATA1P15976 413 aaPredicted RBP12.39□□□□□ -0.43
CTSD-213ENST00000637915 ASIPP42127 132 aa12.39□□□□□ -0.43
CTSD-213ENST00000637915 SNRPD3P62318 126 aaKnown RBP12.39□□□□□ -0.43
CTSD-213ENST00000637915 SLURP1P55000 103 aa12.39□□□□□ -0.43
CTSD-213ENST00000637915 TCTEX1D4Q5JR98 221 aa12.39□□□□□ -0.43
CTSD-213ENST00000637915 ADAMTSL5Q6ZMM2 481 aa12.39□□□□□ -0.43
CTSD-213ENST00000637915 SNHG12Q9BXW3 62 aa12.39□□□□□ -0.43
CTSD-213ENST00000637915 S100A4P26447 101 aaKnown RBP12.38□□□□□ -0.43
CTSD-213ENST00000637915 C2orf88Q9BSF0 95 aa12.38□□□□□ -0.43
CTSD-213ENST00000637915 TLN2Q9Y4G6 2542 aa12.38□□□□□ -0.43
CTSD-213ENST00000637915 AKAP9Q99996 3911 aa12.38□□□□□ -0.43
CTSD-213ENST00000637915 DNAJC9-AS1A6NH13 148 aa12.38□□□□□ -0.43
CTSD-213ENST00000637915 H0Y8G0 127 aa12.38□□□□□ -0.43
CTSD-213ENST00000637915 GNRH2O43555 120 aa12.38□□□□□ -0.43
CTSD-213ENST00000637915 HBDP02042 147 aa12.38□□□□□ -0.43
CTSD-213ENST00000637915 MED14OSP0DP75 135 aa12.38□□□□□ -0.43
CTSD-213ENST00000637915 IGLL1P15814 213 aa12.38□□□□□ -0.43
CTSD-213ENST00000637915 FXYD7P58549 80 aa12.38□□□□□ -0.43
CTSD-213ENST00000637915 KRTAP1-1Q07627 177 aa12.38□□□□□ -0.43
CTSD-213ENST00000637915 LINC00469Q8N7U9 141 aa12.38□□□□□ -0.43
CTSD-213ENST00000637915 WFDC12Q8WWY7 111 aa12.38□□□□□ -0.43
CTSD-213ENST00000637915 MCRIP2Q9BUT9 160 aaKnown RBP12.38□□□□□ -0.43
CTSD-213ENST00000637915 SCRT2Q9NQ03 307 aa12.38□□□□□ -0.43
CTSD-213ENST00000637915 UQCR10Q9UDW1 63 aa12.38□□□□□ -0.43
CTSD-213ENST00000637915 A0A0J9YX75 114 aa12.37□□□□□ -0.43
CTSD-213ENST00000637915 LINC01546A6NGU7 62 aa12.37□□□□□ -0.43
CTSD-213ENST00000637915 M0R143 59 aa12.37□□□□□ -0.43
CTSD-213ENST00000637915 M0R381 172 aa12.37□□□□□ -0.43
CTSD-213ENST00000637915 SPRY2O43597 315 aa12.37□□□□□ -0.43
CTSD-213ENST00000637915 Q6ZSV7 163 aa12.37□□□□□ -0.43
CTSD-213ENST00000637915 C4orf3Q8WVX3 66 aa12.37□□□□□ -0.43
CTSD-213ENST00000637915 TRAV26-2A0A0B4J265 109 aa12.36□□□□□ -0.43
CTSD-213ENST00000637915 LINC01619G3V211 115 aa12.36□□□□□ -0.43
CTSD-213ENST00000637915 RNASE3P12724 160 aaKnown RBP12.36□□□□□ -0.43
CTSD-213ENST00000637915 LINC01545Q5VT33 79 aa12.36□□□□□ -0.43
CTSD-213ENST00000637915 OR2K2Q8NGT1 345 aa12.36□□□□□ -0.43
CTSD-213ENST00000637915 ODF3Q96PU9 254 aa12.36□□□□□ -0.43
CTSD-213ENST00000637915 PHLDA3Q9Y5J5 127 aa12.36□□□□□ -0.43
CTSD-213ENST00000637915 CUBNO60494 3623 aa12.36□□□□□ -0.43
CTSD-213ENST00000637915 NRACQ8N912 160 aa12.36□□□□□ -0.43
CTSD-213ENST00000637915 OR11H1Q8NG94 326 aa12.36□□□□□ -0.43
CTSD-213ENST00000637915 NXT2Q9NPJ8 142 aaKnown RBP12.36□□□□□ -0.43
CTSD-213ENST00000637915 CCDC168Q8NDH2 2452 aa12.35□□□□□ -0.43
CTSD-213ENST00000637915 HELZ2Q9BYK8 2649 aaKnown RBP12.35□□□□□ -0.43
CTSD-213ENST00000637915 LEPP41159 167 aa12.34□□□□□ -0.43
CTSD-213ENST00000637915 KHDC1LQ5JSQ8 128 aa12.34□□□□□ -0.43
CTSD-213ENST00000637915 MRPL52Q86TS9 123 aaKnown RBP12.34□□□□□ -0.43
CTSD-213ENST00000637915 ESM1Q9NQ30 184 aa12.34□□□□□ -0.43
CTSD-213ENST00000637915 MYO9AB2RTY4 2548 aa12.34□□□□□ -0.43
CTSD-213ENST00000637915 IGLV2-18A0A075B6J9 118 aa12.34□□□□□ -0.43
CTSD-213ENST00000637915 TRAV12-3A0A0B4J271 114 aa12.34□□□□□ -0.43
CTSD-213ENST00000637915 FAM159AQ6UWV7 190 aa12.34□□□□□ -0.43
CTSD-213ENST00000637915 DUX3Q96PT4 197 aa12.34□□□□□ -0.43
CTSD-213ENST00000637915 FOXC2Q99958 501 aa12.34□□□□□ -0.43
CTSD-213ENST00000637915 PMCHL2Q9BQD1 86 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms