RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 SFTA3P0C7M3 94 aa13.05□□□□□ -0.32
CLN6-221ENST00000637494 SUMO1P63165 101 aaKnown RBP13.05□□□□□ -0.32
CLN6-221ENST00000637494 RGS21Q2M5E4 152 aa13.05□□□□□ -0.32
CLN6-221ENST00000637494 Q5BKY6 102 aa13.05□□□□□ -0.32
CLN6-221ENST00000637494 OR2T35Q8NGX2 323 aa13.05□□□□□ -0.32
CLN6-221ENST00000637494 SUN5Q8TC36 379 aa13.05□□□□□ -0.32
CLN6-221ENST00000637494 ZNF479Q96JC4 524 aa13.05□□□□□ -0.32
CLN6-221ENST00000637494 SGK494Q96LW2 274 aa13.05□□□□□ -0.32
CLN6-221ENST00000637494 DNAH17Q9UFH2 4485 aa13.04□□□□□ -0.32
CLN6-221ENST00000637494 IGHV3-16A0A0C4DH30 117 aa13.04□□□□□ -0.32
CLN6-221ENST00000637494 C9JCJ5 164 aa13.04□□□□□ -0.32
CLN6-221ENST00000637494 TAAR5O14804 337 aa13.04□□□□□ -0.32
CLN6-221ENST00000637494 TYMSP04818 313 aa13.04□□□□□ -0.32
CLN6-221ENST00000637494 RPL7L1Q6DKI1 246 aaKnown RBP13.04□□□□□ -0.32
CLN6-221ENST00000637494 TVP23CQ96ET8 276 aa13.04□□□□□ -0.32
CLN6-221ENST00000637494 KRTAP1-5Q9BYS1 174 aa13.04□□□□□ -0.32
CLN6-221ENST00000637494 PSG8Q9UQ74 426 aa13.04□□□□□ -0.32
CLN6-221ENST00000637494 FAT2Q9NYQ8 4349 aa13.04□□□□□ -0.32
CLN6-221ENST00000637494 MUC4Q99102 2169 aa13.03□□□□□ -0.32
CLN6-221ENST00000637494 TRAV9-2A0A087WT02 112 aa13.03□□□□□ -0.32
CLN6-221ENST00000637494 GYPEP15421 78 aa13.03□□□□□ -0.32
CLN6-221ENST00000637494 FLI1Q01543 452 aaPredicted RBP13.03□□□□□ -0.32
CLN6-221ENST00000637494 SMUG1Q53HV7 270 aa13.03□□□□□ -0.32
CLN6-221ENST00000637494 LYPD5Q6UWN5 251 aa13.03□□□□□ -0.32
CLN6-221ENST00000637494 CYB561D1Q8N8Q1 229 aa13.03□□□□□ -0.32
CLN6-221ENST00000637494 TXNDC17Q9BRA2 123 aa13.03□□□□□ -0.32
CLN6-221ENST00000637494 EPDR1Q9UM22 224 aa13.03□□□□□ -0.32
CLN6-221ENST00000637494 RNF222A6NCQ9 220 aa13.02□□□□□ -0.33
CLN6-221ENST00000637494 K7EQD1 137 aa13.02□□□□□ -0.33
CLN6-221ENST00000637494 GCGP01275 180 aa13.02□□□□□ -0.33
CLN6-221ENST00000637494 PPT1P50897 306 aa13.02□□□□□ -0.33
CLN6-221ENST00000637494 SAPCD1Q5SSQ6 148 aa13.02□□□□□ -0.33
CLN6-221ENST00000637494 AKR1C8PQ5T2L2 129 aa13.02□□□□□ -0.33
CLN6-221ENST00000637494 PRNTQ86SH4 94 aa13.02□□□□□ -0.33
CLN6-221ENST00000637494 TMEM75Q8N9X5 138 aa13.02□□□□□ -0.33
CLN6-221ENST00000637494 HERC2O95714 4834 aa13.01□□□□□ -0.33
CLN6-221ENST00000637494 CTXND1A0A1B0GTU2 59 aa13.01□□□□□ -0.33
CLN6-221ENST00000637494 A0A1W2PRE2 83 aa13.01□□□□□ -0.33
CLN6-221ENST00000637494 IFNA7P01567 189 aa13.01□□□□□ -0.33
CLN6-221ENST00000637494 SH2D6Q7Z4S9 175 aa13.01□□□□□ -0.33
CLN6-221ENST00000637494 GGTLC3B5MD39 225 aa13□□□□□ -0.33
CLN6-221ENST00000637494 PFN1P07737 140 aaKnown RBP13□□□□□ -0.33
CLN6-221ENST00000637494 LINC00315P59091 139 aa13□□□□□ -0.33
CLN6-221ENST00000637494 NKX6-2Q9C056 277 aaPredicted RBP13□□□□□ -0.33
CLN6-221ENST00000637494 CIDEAO60543 219 aa12.99□□□□□ -0.33
CLN6-221ENST00000637494 ZNF876PQ49A33 203 aa12.99□□□□□ -0.33
CLN6-221ENST00000637494 LY96Q9Y6Y9 160 aa12.99□□□□□ -0.33
CLN6-221ENST00000637494 EREGO14944 169 aa12.98□□□□□ -0.33
CLN6-221ENST00000637494 ARPC5O15511 151 aa12.98□□□□□ -0.33
CLN6-221ENST00000637494 SPATA12Q7Z6I5 190 aa12.98□□□□□ -0.33
CLN6-221ENST00000637494 NFE4Q86UQ8 179 aa12.98□□□□□ -0.33
CLN6-221ENST00000637494 NHLRC2Q8NBF2 726 aa12.98□□□□□ -0.33
CLN6-221ENST00000637494 K7EP13 123 aa12.97□□□□□ -0.33
CLN6-221ENST00000637494 EVI2AP22794 236 aa12.97□□□□□ -0.33
CLN6-221ENST00000637494 ZNF80P51504 273 aaPredicted RBP12.97□□□□□ -0.33
CLN6-221ENST00000637494 IGLV2-11P01706 119 aa12.96□□□□□ -0.33
CLN6-221ENST00000637494 S100A4P26447 101 aaKnown RBP12.96□□□□□ -0.33
CLN6-221ENST00000637494 UBE2G2P60604 165 aa12.96□□□□□ -0.33
CLN6-221ENST00000637494 PRADC1Q9BSG0 188 aa12.96□□□□□ -0.33
CLN6-221ENST00000637494 PKD1P98161 4303 aa12.96□□□□□ -0.34
CLN6-221ENST00000637494 KIAA1109Q2LD37 5005 aa12.95□□□□□ -0.34
CLN6-221ENST00000637494 GATA1P15976 413 aaPredicted RBP12.95□□□□□ -0.34
CLN6-221ENST00000637494 ZNF726P1Q15940 193 aa12.95□□□□□ -0.34
CLN6-221ENST00000637494 STOML3Q8TAV4 291 aa12.95□□□□□ -0.34
CLN6-221ENST00000637494 HIST1H2BAQ96A08 127 aa12.95□□□□□ -0.34
CLN6-221ENST00000637494 FABP5P3A8MUU1 101 aa12.94□□□□□ -0.34
CLN6-221ENST00000637494 PEX7O00628 323 aa12.94□□□□□ -0.34
CLN6-221ENST00000637494 CDK2AP2O75956 126 aa12.94□□□□□ -0.34
CLN6-221ENST00000637494 FGF8P55075 233 aaPredicted RBP12.94□□□□□ -0.34
CLN6-221ENST00000637494 ERVFC1-1P60608 527 aa12.94□□□□□ -0.34
CLN6-221ENST00000637494 C11orf21Q9P2W6 132 aa12.94□□□□□ -0.34
CLN6-221ENST00000637494 BOLA1Q9Y3E2 137 aa12.94□□□□□ -0.34
CLN6-221ENST00000637494 ARL2-SNX15V9GYD0 113 aa12.94□□□□□ -0.34
CLN6-221ENST00000637494 PKHD1P08F94 4074 aa12.93□□□□□ -0.34
CLN6-221ENST00000637494 TRAV34A0A0B4J273 112 aa12.93□□□□□ -0.34
CLN6-221ENST00000637494 MAP1LC3B2A6NCE7 125 aa12.93□□□□□ -0.34
CLN6-221ENST00000637494 RS1O15537 224 aa12.93□□□□□ -0.34
CLN6-221ENST00000637494 RHOHQ15669 191 aa12.93□□□□□ -0.34
CLN6-221ENST00000637494 CFAP126Q5VTH2 177 aa12.93□□□□□ -0.34
CLN6-221ENST00000637494 C10orf126Q8N4M7 172 aa12.93□□□□□ -0.34
CLN6-221ENST00000637494 PTH2Q96A98 100 aa12.93□□□□□ -0.34
CLN6-221ENST00000637494 C9orf85Q96MD7 179 aa12.93□□□□□ -0.34
CLN6-221ENST00000637494 KRTAP17-1Q9BYP8 105 aa12.93□□□□□ -0.34
CLN6-221ENST00000637494 MAP1LC3BQ9GZQ8 125 aa12.93□□□□□ -0.34
CLN6-221ENST00000637494 TRBV6-4A0A1B0GX49 114 aa12.92□□□□□ -0.34
CLN6-221ENST00000637494 FAM74A7A6NL05 159 aa12.92□□□□□ -0.34
CLN6-221ENST00000637494 ASIPP42127 132 aa12.92□□□□□ -0.34
CLN6-221ENST00000637494 UBE2G1P62253 170 aa12.92□□□□□ -0.34
CLN6-221ENST00000637494 WFDC10BQ8IUB3 73 aa12.92□□□□□ -0.34
CLN6-221ENST00000637494 LINC00479Q96M42 142 aa12.92□□□□□ -0.34
CLN6-221ENST00000637494 LOC100131303A0A0U1RQF7 123 aa12.91□□□□□ -0.34
CLN6-221ENST00000637494 MGST1P10620 155 aaKnown RBP12.91□□□□□ -0.34
CLN6-221ENST00000637494 TIRAPP58753 221 aa12.91□□□□□ -0.34
CLN6-221ENST00000637494 ZNF506Q5JVG8 444 aa12.91□□□□□ -0.34
CLN6-221ENST00000637494 Q86TA4 180 aa12.91□□□□□ -0.34
CLN6-221ENST00000637494 SLC25A29Q8N8R3 303 aa12.91□□□□□ -0.34
CLN6-221ENST00000637494 MSRB1Q9NZV6 116 aa12.91□□□□□ -0.34
CLN6-221ENST00000637494 TRAV8-6A0A0B4J262 113 aa12.9□□□□□ -0.34
CLN6-221ENST00000637494 PGPEP1LA6NFU8 196 aa12.9□□□□□ -0.34
CLN6-221ENST00000637494 G3V3Q6 166 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms