RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 ORM1P02763 201 aa13.5□□□□□ -0.25
MECP2-216ENST00000627864 TDRG1Q3Y452 100 aa13.5□□□□□ -0.25
MECP2-216ENST00000627864 SMIM7Q9BQ49 75 aa13.5□□□□□ -0.25
MECP2-216ENST00000627864 SDF2L1Q9HCN8 221 aa13.5□□□□□ -0.25
MECP2-216ENST00000627864 GSN-AS1Q9NRJ2 163 aa13.5□□□□□ -0.25
MECP2-216ENST00000627864 TRGV11A0A075B6L2 103 aa13.49□□□□□ -0.25
MECP2-216ENST00000627864 CXorf65A6NEN9 183 aa13.49□□□□□ -0.25
MECP2-216ENST00000627864 SNURFLB1AK76 121 aa13.49□□□□□ -0.25
MECP2-216ENST00000627864 OCC1Q8TAD7 63 aa13.49□□□□□ -0.25
MECP2-216ENST00000627864 SMIM12Q96EX1 92 aa13.49□□□□□ -0.25
MECP2-216ENST00000627864 CELA1Q9UNI1 258 aa13.49□□□□□ -0.25
MECP2-216ENST00000627864 M0R036 132 aa13.48□□□□□ -0.25
MECP2-216ENST00000627864 TYMSP04818 313 aa13.48□□□□□ -0.25
MECP2-216ENST00000627864 SPART-AS1P0CW21 52 aa13.48□□□□□ -0.25
MECP2-216ENST00000627864 FAM222AQ5U5X8 452 aa13.48□□□□□ -0.25
MECP2-216ENST00000627864 C11orf72Q8NBR9 251 aa13.48□□□□□ -0.25
MECP2-216ENST00000627864 C11orf45Q8TAV5 145 aa13.48□□□□□ -0.25
MECP2-216ENST00000627864 NOP10Q9NPE3 64 aaKnown RBP13.48□□□□□ -0.25
MECP2-216ENST00000627864 TIMM8BQ9Y5J9 83 aaPredicted RBP13.48□□□□□ -0.25
MECP2-216ENST00000627864 IGKV3D-20A0A0C4DH25 116 aa13.47□□□□□ -0.25
MECP2-216ENST00000627864 B4DEV8 164 aa13.47□□□□□ -0.25
MECP2-216ENST00000627864 ZNF415Q09FC8 603 aa13.47□□□□□ -0.25
MECP2-216ENST00000627864 OR5I1Q13606 314 aa13.47□□□□□ -0.25
MECP2-216ENST00000627864 IBA57Q5T440 356 aaKnown RBP13.47□□□□□ -0.25
MECP2-216ENST00000627864 IL17DQ8TAD2 202 aa13.47□□□□□ -0.25
MECP2-216ENST00000627864 WWC2-AS2Q96NR7 200 aa13.47□□□□□ -0.25
MECP2-216ENST00000627864 BIN3Q9NQY0 253 aa13.47□□□□□ -0.25
MECP2-216ENST00000627864 MDFICQ9P1T7 246 aa13.47□□□□□ -0.25
MECP2-216ENST00000627864 DKK2Q9UBU2 259 aa13.47□□□□□ -0.25
MECP2-216ENST00000627864 TCL1AP56279 114 aa13.46□□□□□ -0.25
MECP2-216ENST00000627864 NANOS2P60321 138 aaKnown RBP13.46□□□□□ -0.25
MECP2-216ENST00000627864 FAM74A3Q4VXF1 159 aa13.46□□□□□ -0.25
MECP2-216ENST00000627864 DAZAP1Q96EP5 407 aaKnown RBP13.46□□□□□ -0.25
MECP2-216ENST00000627864 MUC4Q99102 2169 aa13.45□□□□□ -0.26
MECP2-216ENST00000627864 TMSB15BA0A087X1C1 80 aa13.45□□□□□ -0.26
MECP2-216ENST00000627864 IGHV3-16A0A0C4DH30 117 aa13.45□□□□□ -0.26
MECP2-216ENST00000627864 KRBOX1C9JBD0 128 aa13.45□□□□□ -0.26
MECP2-216ENST00000627864 SOHLH1Q5JUK2 328 aa13.45□□□□□ -0.26
MECP2-216ENST00000627864 TEX48A0A1B0GUV7 120 aa13.44□□□□□ -0.26
MECP2-216ENST00000627864 GRIFINA4D1Z8 144 aa13.44□□□□□ -0.26
MECP2-216ENST00000627864 LYRM9A8MSI8 78 aa13.44□□□□□ -0.26
MECP2-216ENST00000627864 K7EN84 100 aa13.44□□□□□ -0.26
MECP2-216ENST00000627864 TMEM241Q24JQ0 296 aa13.44□□□□□ -0.26
MECP2-216ENST00000627864 LINC01559Q495D7 138 aa13.44□□□□□ -0.26
MECP2-216ENST00000627864 COMMD7Q86VX2 200 aa13.44□□□□□ -0.26
MECP2-216ENST00000627864 LY96Q9Y6Y9 160 aa13.44□□□□□ -0.26
MECP2-216ENST00000627864 LINC00862A6NCI5 91 aa13.43□□□□□ -0.26
MECP2-216ENST00000627864 C19orf71A6NCJ1 209 aa13.43□□□□□ -0.26
MECP2-216ENST00000627864 SFTA3P0C7M3 94 aa13.43□□□□□ -0.26
MECP2-216ENST00000627864 DEFB130BP0DP73 79 aa13.43□□□□□ -0.26
MECP2-216ENST00000627864 DEFB130AP0DP74 79 aa13.43□□□□□ -0.26
MECP2-216ENST00000627864 DAD1P61803 113 aa13.43□□□□□ -0.26
MECP2-216ENST00000627864 RPL19P84098 196 aaKnown RBP13.43□□□□□ -0.26
MECP2-216ENST00000627864 DAZ2Q13117 558 aaKnown RBP13.43□□□□□ -0.26
MECP2-216ENST00000627864 C12orf74Q32Q52 190 aa13.43□□□□□ -0.26
MECP2-216ENST00000627864 S100A4P26447 101 aaKnown RBP13.42□□□□□ -0.26
MECP2-216ENST00000627864 ASIPP42127 132 aa13.42□□□□□ -0.26
MECP2-216ENST00000627864 SPXQ9BT56 116 aa13.42□□□□□ -0.26
MECP2-216ENST00000627864 NAT8Q9UHE5 227 aa13.42□□□□□ -0.26
MECP2-216ENST00000627864 TRGV1A0A0A0MS02 117 aa13.41□□□□□ -0.26
MECP2-216ENST00000627864 GAGE12BA1L429 117 aa13.41□□□□□ -0.26
MECP2-216ENST00000627864 GAGE7O76087 117 aa13.41□□□□□ -0.26
MECP2-216ENST00000627864 P01737 135 aa13.41□□□□□ -0.26
MECP2-216ENST00000627864 GAGE12FP0CL80 117 aa13.41□□□□□ -0.26
MECP2-216ENST00000627864 GAGE12GP0CL81 117 aa13.41□□□□□ -0.26
MECP2-216ENST00000627864 GAGE12IP0CL82 117 aa13.41□□□□□ -0.26
MECP2-216ENST00000627864 UQCC3Q6UW78 93 aa13.41□□□□□ -0.26
MECP2-216ENST00000627864 Q6ZTI0 123 aa13.41□□□□□ -0.26
MECP2-216ENST00000627864 LINC01551Q86U37 167 aa13.41□□□□□ -0.26
MECP2-216ENST00000627864 NUDT10Q8NFP7 164 aa13.41□□□□□ -0.26
MECP2-216ENST00000627864 OR2D3Q8NGH3 330 aa13.41□□□□□ -0.26
MECP2-216ENST00000627864 NUDT11Q96G61 164 aa13.41□□□□□ -0.26
MECP2-216ENST00000627864 RNASE7Q9H1E1 156 aaKnown RBP13.41□□□□□ -0.26
MECP2-216ENST00000627864 MRPL16Q9NX20 251 aaKnown RBP13.41□□□□□ -0.26
MECP2-216ENST00000627864 SPINK4O60575 86 aa13.4□□□□□ -0.26
MECP2-216ENST00000627864 RNASE3P12724 160 aaKnown RBP13.4□□□□□ -0.26
MECP2-216ENST00000627864 ZNF575Q86XF7 245 aa13.4□□□□□ -0.26
MECP2-216ENST00000627864 H3BVH4 76 aa13.39□□□□□ -0.27
MECP2-216ENST00000627864 RPL23P62829 140 aaKnown RBP13.39□□□□□ -0.27
MECP2-216ENST00000627864 DNLZQ5SXM8 178 aa13.39□□□□□ -0.27
MECP2-216ENST00000627864 Q6ZTC4 211 aa13.39□□□□□ -0.27
MECP2-216ENST00000627864 MUC7Q8TAX7 377 aa13.39□□□□□ -0.27
MECP2-216ENST00000627864 C9orf85Q96MD7 179 aa13.39□□□□□ -0.27
MECP2-216ENST00000627864 M0R2P5 195 aa13.38□□□□□ -0.27
MECP2-216ENST00000627864 ARMS2P0C7Q2 107 aa13.38□□□□□ -0.27
MECP2-216ENST00000627864 RPS20P60866 119 aaKnown RBP13.38□□□□□ -0.27
MECP2-216ENST00000627864 ADIRFQ15847 76 aa13.38□□□□□ -0.27
MECP2-216ENST00000627864 LGALS9BQ3B8N2 356 aa13.38□□□□□ -0.27
MECP2-216ENST00000627864 LINC00612Q8N6U2 182 aa13.38□□□□□ -0.27
MECP2-216ENST00000627864 NACAE9PAV3 2078 aa13.38□□□□□ -0.27
MECP2-216ENST00000627864 GATCO43716 136 aaKnown RBP13.37□□□□□ -0.27
MECP2-216ENST00000627864 ERVFC1-1P60608 527 aa13.37□□□□□ -0.27
MECP2-216ENST00000627864 ZFAND6Q6FIF0 208 aa13.37□□□□□ -0.27
MECP2-216ENST00000627864 FAM231DQ6ZW35 169 aa13.37□□□□□ -0.27
MECP2-216ENST00000627864 IL36BQ9NZH7 164 aa13.37□□□□□ -0.27
MECP2-216ENST00000627864 TRGV2A0A075B6R0 118 aa13.36□□□□□ -0.27
MECP2-216ENST00000627864 CXCL1P09341 107 aa13.36□□□□□ -0.27
MECP2-216ENST00000627864 GZMBP10144 247 aa13.36□□□□□ -0.27
MECP2-216ENST00000627864 HTN3P15516 51 aa13.36□□□□□ -0.27
MECP2-216ENST00000627864 PHLDA1Q8WV24 401 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms