RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 GOLT1BQ9Y3E0 138 aa12□□□□□ -0.49
CCNA1-203ENST00000625767 H7BYZ3 331 aa11.99□□□□□ -0.49
CCNA1-203ENST00000625767 ORM1P02763 201 aa11.99□□□□□ -0.49
CCNA1-203ENST00000625767 C20orf144Q9BQM9 153 aa11.99□□□□□ -0.49
CCNA1-203ENST00000625767 TGP01266 2768 aa11.98□□□□□ -0.49
CCNA1-203ENST00000625767 IGHV1OR15-1A0A075B7D0 117 aa11.98□□□□□ -0.49
CCNA1-203ENST00000625767 GRIFINA4D1Z8 144 aa11.97□□□□□ -0.49
CCNA1-203ENST00000625767 DEFB4AO15263 64 aa11.97□□□□□ -0.49
CCNA1-203ENST00000625767 TYMSP04818 313 aa11.97□□□□□ -0.49
CCNA1-203ENST00000625767 GZMBP10144 247 aa11.97□□□□□ -0.49
CCNA1-203ENST00000625767 IBA57Q5T440 356 aaKnown RBP11.97□□□□□ -0.49
CCNA1-203ENST00000625767 FAM159AQ6UWV7 190 aa11.97□□□□□ -0.49
CCNA1-203ENST00000625767 TMEM256Q8N2U0 113 aa11.97□□□□□ -0.49
CCNA1-203ENST00000625767 PYGO2Q9BRQ0 406 aa11.97□□□□□ -0.49
CCNA1-203ENST00000625767 CARHSP1Q9Y2V2 147 aaKnown RBP11.97□□□□□ -0.49
CCNA1-203ENST00000625767 MUC4Q99102 2169 aa11.97□□□□□ -0.49
CCNA1-203ENST00000625767 B4DEV8 164 aa11.97□□□□□ -0.49
CCNA1-203ENST00000625767 KRBOX1C9JBD0 128 aa11.97□□□□□ -0.49
CCNA1-203ENST00000625767 ERVFC1-1P60608 527 aa11.97□□□□□ -0.49
CCNA1-203ENST00000625767 MDFICQ9P1T7 246 aa11.97□□□□□ -0.49
CCNA1-203ENST00000625767 STAB2Q8WWQ8 2551 aa11.96□□□□□ -0.49
CCNA1-203ENST00000625767 CBY3A6NI87 242 aa11.96□□□□□ -0.5
CCNA1-203ENST00000625767 LINC01559Q495D7 138 aa11.96□□□□□ -0.5
CCNA1-203ENST00000625767 DAZAP1Q96EP5 407 aaKnown RBP11.96□□□□□ -0.5
CCNA1-203ENST00000625767 SFRP2Q96HF1 295 aa11.96□□□□□ -0.5
CCNA1-203ENST00000625767 P01737 135 aa11.95□□□□□ -0.5
CCNA1-203ENST00000625767 APOC3P02656 99 aa11.95□□□□□ -0.5
CCNA1-203ENST00000625767 TDRG1Q3Y452 100 aa11.95□□□□□ -0.5
CCNA1-203ENST00000625767 Q8NAQ8 132 aa11.95□□□□□ -0.5
CCNA1-203ENST00000625767 OR2D3Q8NGH3 330 aa11.95□□□□□ -0.5
CCNA1-203ENST00000625767 SPATA25Q9BR10 227 aa11.95□□□□□ -0.5
CCNA1-203ENST00000625767 TP53TG1Q9Y2A0 90 aa11.95□□□□□ -0.5
CCNA1-203ENST00000625767 IGHV4-28A0A0C4DH34 117 aa11.94□□□□□ -0.5
CCNA1-203ENST00000625767 PLAC8L1A1L4L8 177 aa11.94□□□□□ -0.5
CCNA1-203ENST00000625767 TMEM189A5PLL7 270 aa11.94□□□□□ -0.5
CCNA1-203ENST00000625767 RRN3P1Q2M238 152 aa11.94□□□□□ -0.5
CCNA1-203ENST00000625767 RNASE8Q8TDE3 154 aaKnown RBP11.94□□□□□ -0.5
CCNA1-203ENST00000625767 EMP1P54849 157 aa11.94□□□□□ -0.5
CCNA1-203ENST00000625767 PNRC1Q12796 327 aaPredicted RBP11.94□□□□□ -0.5
CCNA1-203ENST00000625767 RNF212Q495C1 297 aa11.94□□□□□ -0.5
CCNA1-203ENST00000625767 FAM231DQ6ZW35 169 aa11.94□□□□□ -0.5
CCNA1-203ENST00000625767 C11orf72Q8NBR9 251 aa11.94□□□□□ -0.5
CCNA1-203ENST00000625767 LINC00467Q9BRT7 94 aa11.94□□□□□ -0.5
CCNA1-203ENST00000625767 RPP21Q9H633 154 aaKnown RBP11.94□□□□□ -0.5
CCNA1-203ENST00000625767 BIN3Q9NQY0 253 aa11.94□□□□□ -0.5
CCNA1-203ENST00000625767 GSN-AS1Q9NRJ2 163 aa11.94□□□□□ -0.5
CCNA1-203ENST00000625767 V9GYV3 84 aa11.94□□□□□ -0.5
CCNA1-203ENST00000625767 IGHV3-16A0A0C4DH30 117 aa11.93□□□□□ -0.5
CCNA1-203ENST00000625767 GATCO43716 136 aaKnown RBP11.93□□□□□ -0.5
CCNA1-203ENST00000625767 RNASE3P12724 160 aaKnown RBP11.93□□□□□ -0.5
CCNA1-203ENST00000625767 NEU1Q99519 415 aa11.93□□□□□ -0.5
CCNA1-203ENST00000625767 OSTCQ9NRP0 149 aa11.93□□□□□ -0.5
CCNA1-203ENST00000625767 TIMM8BQ9Y5J9 83 aaPredicted RBP11.93□□□□□ -0.5
CCNA1-203ENST00000625767 OR10G8Q8NGN5 311 aa11.92□□□□□ -0.5
CCNA1-203ENST00000625767 TMEM263Q8WUH6 116 aaKnown RBP11.92□□□□□ -0.5
CCNA1-203ENST00000625767 KCNS1Q96KK3 526 aa11.92□□□□□ -0.5
CCNA1-203ENST00000625767 MUC21A0A0G2JKD1 596 aa11.91□□□□□ -0.5
CCNA1-203ENST00000625767 MUC21A0A140T8X8 626 aa11.91□□□□□ -0.5
CCNA1-203ENST00000625767 H3BVH4 76 aa11.91□□□□□ -0.5
CCNA1-203ENST00000625767 ATRAIDQ6UW56 229 aa11.91□□□□□ -0.5
CCNA1-203ENST00000625767 CLRN3Q8NCR9 226 aa11.91□□□□□ -0.5
CCNA1-203ENST00000625767 ZMAT4Q9H898 229 aa11.91□□□□□ -0.5
CCNA1-203ENST00000625767 MIFP14174 115 aa11.9□□□□□ -0.5
CCNA1-203ENST00000625767 TCL1AP56279 114 aa11.9□□□□□ -0.5
CCNA1-203ENST00000625767 C15orf54Q8N8G6 183 aa11.9□□□□□ -0.5
CCNA1-203ENST00000625767 IL17DQ8TAD2 202 aa11.9□□□□□ -0.5
CCNA1-203ENST00000625767 GTSF1Q8WW33 167 aa11.9□□□□□ -0.5
CCNA1-203ENST00000625767 TRGV11A0A075B6L2 103 aa11.89□□□□□ -0.51
CCNA1-203ENST00000625767 A0A0J9YWU9 116 aa11.89□□□□□ -0.51
CCNA1-203ENST00000625767 SMIM9A6NGZ8 99 aa11.89□□□□□ -0.51
CCNA1-203ENST00000625767 ATP6V1G1O75348 118 aa11.89□□□□□ -0.51
CCNA1-203ENST00000625767 ARMS2P0C7Q2 107 aa11.89□□□□□ -0.51
CCNA1-203ENST00000625767 ASIPP42127 132 aa11.89□□□□□ -0.51
CCNA1-203ENST00000625767 SSTP61278 116 aa11.89□□□□□ -0.51
CCNA1-203ENST00000625767 C16orf74Q96GX8 76 aa11.89□□□□□ -0.51
CCNA1-203ENST00000625767 TPPP3Q9BW30 176 aa11.89□□□□□ -0.51
CCNA1-203ENST00000625767 NOP10Q9NPE3 64 aaKnown RBP11.89□□□□□ -0.51
CCNA1-203ENST00000625767 CELA1Q9UNI1 258 aa11.89□□□□□ -0.51
CCNA1-203ENST00000625767 DNAH7Q8WXX0 4024 aa11.89□□□□□ -0.51
CCNA1-203ENST00000625767 C7orf77A4D0Y5 90 aa11.88□□□□□ -0.51
CCNA1-203ENST00000625767 S100A4P26447 101 aaKnown RBP11.88□□□□□ -0.51
CCNA1-203ENST00000625767 NACAE9PAV3 2078 aa11.88□□□□□ -0.51
CCNA1-203ENST00000625767 IGLC6P0CF74 106 aa11.87□□□□□ -0.51
CCNA1-203ENST00000625767 ZNF415Q09FC8 603 aa11.87□□□□□ -0.51
CCNA1-203ENST00000625767 C9orf85Q96MD7 179 aa11.87□□□□□ -0.51
CCNA1-203ENST00000625767 SVBPQ8N300 66 aa11.87□□□□□ -0.51
CCNA1-203ENST00000625767 MRPL16Q9NX20 251 aaKnown RBP11.87□□□□□ -0.51
CCNA1-203ENST00000625767 SNURFLB1AK76 121 aa11.86□□□□□ -0.51
CCNA1-203ENST00000625767 MT-ND4LP03901 98 aa11.86□□□□□ -0.51
CCNA1-203ENST00000625767 CT83Q5H943 113 aa11.86□□□□□ -0.51
CCNA1-203ENST00000625767 DNLZQ5SXM8 178 aa11.86□□□□□ -0.51
CCNA1-203ENST00000625767 ZNF493Q6ZR52 646 aa11.86□□□□□ -0.51
CCNA1-203ENST00000625767 OR10AG1Q8NH19 301 aa11.86□□□□□ -0.51
CCNA1-203ENST00000625767 RPS10P5Q9NQ39 176 aa11.86□□□□□ -0.51
CCNA1-203ENST00000625767 IL36BQ9NZH7 164 aa11.86□□□□□ -0.51
CCNA1-203ENST00000625767 A8MWL6 223 aa11.85□□□□□ -0.51
CCNA1-203ENST00000625767 CXCL1P09341 107 aa11.85□□□□□ -0.51
CCNA1-203ENST00000625767 RPS20P60866 119 aaKnown RBP11.85□□□□□ -0.51
CCNA1-203ENST00000625767 FAM222AQ5U5X8 452 aa11.85□□□□□ -0.51
CCNA1-203ENST00000625767 LYZL1Q6UWQ5 148 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms