RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 ZNF80P51504 273 aaPredicted RBP6.76□□□□□ -1.33
VCL-207ENST00000624354 SRSF1Q07955 248 aaKnown RBP eCLIP6.76□□□□□ -1.332e-6■□□□□ 10.6
VCL-207ENST00000624354 SHISA2Q6UWI4 295 aa6.76□□□□□ -1.33
VCL-207ENST00000624354 SONP18583 2426 aaKnown RBP6.75□□□□□ -1.33
VCL-207ENST00000624354 RRN3P1Q2M238 152 aa6.75□□□□□ -1.33
VCL-207ENST00000624354 LINC01560Q8TB33 94 aa6.75□□□□□ -1.33
VCL-207ENST00000624354 IGFBPL1Q8WX77 278 aa6.75□□□□□ -1.33
VCL-207ENST00000624354 FABP5P3A8MUU1 101 aa6.75□□□□□ -1.33
VCL-207ENST00000624354 FCER1GP30273 86 aa6.75□□□□□ -1.33
VCL-207ENST00000624354 XGP55808 180 aa6.75□□□□□ -1.33
VCL-207ENST00000624354 IGFL4Q6B9Z1 124 aa6.75□□□□□ -1.33
VCL-207ENST00000624354 ATP6V0E2Q8NHE4 81 aa6.75□□□□□ -1.33
VCL-207ENST00000624354 B5MCH6 92 aa6.75□□□□□ -1.33
VCL-207ENST00000624354 SRSF2Q01130 221 aaKnown RBP6.75□□□□□ -1.33
VCL-207ENST00000624354 GTSCR1Q86UQ5 136 aa6.75□□□□□ -1.33
VCL-207ENST00000624354 NXT2Q9NPJ8 142 aaKnown RBP6.75□□□□□ -1.33
VCL-207ENST00000624354 MSRB1Q9NZV6 116 aa6.75□□□□□ -1.33
VCL-207ENST00000624354 PRSS1P07477 247 aa6.74□□□□□ -1.33
VCL-207ENST00000624354 CTSGP08311 255 aa6.74□□□□□ -1.33
VCL-207ENST00000624354 HLA-DMBP28068 263 aa6.74□□□□□ -1.33
VCL-207ENST00000624354 LEPP41159 167 aa6.74□□□□□ -1.33
VCL-207ENST00000624354 NDPQ00604 133 aa6.74□□□□□ -1.33
VCL-207ENST00000624354 TAL2Q16559 108 aa6.74□□□□□ -1.33
VCL-207ENST00000624354 RNF185Q96GF1 192 aa6.74□□□□□ -1.33
VCL-207ENST00000624354 TIMD4Q96H15 378 aa6.74□□□□□ -1.33
VCL-207ENST00000624354 SMAD5-AS1Q9Y6J3 95 aa6.74□□□□□ -1.33
VCL-207ENST00000624354 M0R1W7 72 aa6.74□□□□□ -1.33
VCL-207ENST00000624354 IGKCP01834 107 aa6.74□□□□□ -1.33
VCL-207ENST00000624354 HIST1H4GQ99525 98 aa6.74□□□□□ -1.33
VCL-207ENST00000624354 CNFNQ9BYD5 112 aa6.74□□□□□ -1.33
VCL-207ENST00000624354 HHLA3Q9XRX5 114 aa6.74□□□□□ -1.33
VCL-207ENST00000624354 UFC1Q9Y3C8 167 aa6.74□□□□□ -1.33
VCL-207ENST00000624354 TNFRSF6BO95407 300 aa6.73□□□□□ -1.33
VCL-207ENST00000624354 PRTN3P24158 256 aa6.73□□□□□ -1.33
VCL-207ENST00000624354 HERV-K104P63124 156 aa6.73□□□□□ -1.33
VCL-207ENST00000624354 VKORC1Q9BQB6 163 aa6.73□□□□□ -1.33
VCL-207ENST00000624354 ACANP16112 2415 aa6.73□□□□□ -1.33
VCL-207ENST00000624354 ARHGAP32A7KAX9 2087 aa6.73□□□□□ -1.33
VCL-207ENST00000624354 TRBV7-9A0A0J9YWB2 115 aa6.73□□□□□ -1.33
VCL-207ENST00000624354 ODF3BA8MYP8 253 aa6.73□□□□□ -1.33
VCL-207ENST00000624354 IGHG4P01861 327 aa6.73□□□□□ -1.33
VCL-207ENST00000624354 ODF1Q14990 250 aa6.73□□□□□ -1.33
VCL-207ENST00000624354 ZFAND6Q6FIF0 208 aa6.73□□□□□ -1.33
VCL-207ENST00000624354 GLMPQ8WWB7 406 aa6.73□□□□□ -1.33
VCL-207ENST00000624354 IGHV3OR16-8A0A075B7F1 116 aa6.73□□□□□ -1.33
VCL-207ENST00000624354 IGHV3-35A0A0C4DH35 117 aa6.73□□□□□ -1.33
VCL-207ENST00000624354 LY6HO94772 140 aa6.73□□□□□ -1.33
VCL-207ENST00000624354 EVI2AP22794 236 aa6.73□□□□□ -1.33
VCL-207ENST00000624354 LINC01559Q495D7 138 aa6.73□□□□□ -1.33
VCL-207ENST00000624354 ZC2HC1BQ5TFG8 222 aa6.73□□□□□ -1.33
VCL-207ENST00000624354 HRNRQ86YZ3 2850 aaPredicted RBP6.72□□□□□ -1.33
VCL-207ENST00000624354 LINC01546A6NGU7 62 aa6.72□□□□□ -1.33
VCL-207ENST00000624354 PRSS29PA6NIE9 313 aa6.72□□□□□ -1.33
VCL-207ENST00000624354 K7ENP7 123 aa6.72□□□□□ -1.33
VCL-207ENST00000624354 LCNL1Q6ZST4 164 aa6.72□□□□□ -1.33
VCL-207ENST00000624354 DYNAPQ8N1N2 210 aa6.72□□□□□ -1.33
VCL-207ENST00000624354 TEX29Q8N6K0 151 aa6.72□□□□□ -1.33
VCL-207ENST00000624354 ZMAT4Q9H898 229 aa6.72□□□□□ -1.33
VCL-207ENST00000624354 FAM90A27PA6NNH2 459 aa6.72□□□□□ -1.33
VCL-207ENST00000624354 DPM2O94777 84 aa6.72□□□□□ -1.33
VCL-207ENST00000624354 GAS8-AS1O95177 125 aa6.72□□□□□ -1.33
VCL-207ENST00000624354 ERCC8Q13216 396 aa6.72□□□□□ -1.33
VCL-207ENST00000624354 NFE4Q86UQ8 179 aa6.72□□□□□ -1.33
VCL-207ENST00000624354 ZNF575Q86XF7 245 aa6.72□□□□□ -1.33
VCL-207ENST00000624354 DEFB104AQ8WTQ1 72 aa6.72□□□□□ -1.33
VCL-207ENST00000624354 FAM110AQ9BQ89 295 aa6.72□□□□□ -1.33
VCL-207ENST00000624354 ATP5LO75964 103 aa6.71□□□□□ -1.33
VCL-207ENST00000624354 FHL3Q13643 280 aa6.71□□□□□ -1.33
VCL-207ENST00000624354 CFAP126Q5VTH2 177 aa6.71□□□□□ -1.33
VCL-207ENST00000624354 FOXC2Q99958 501 aa6.71□□□□□ -1.33
VCL-207ENST00000624354 VCX2Q9H322 139 aa6.71□□□□□ -1.33
VCL-207ENST00000624354 HLA-DRB4P13762 266 aa6.71□□□□□ -1.34
VCL-207ENST00000624354 GRNP28799 593 aaKnown RBP6.71□□□□□ -1.34
VCL-207ENST00000624354 VMO1Q7Z5L0 202 aa6.71□□□□□ -1.34
VCL-207ENST00000624354 DTX2Q86UW9 622 aa6.71□□□□□ -1.34
VCL-207ENST00000624354 TMEM158Q8WZ71 300 aa6.71□□□□□ -1.34
VCL-207ENST00000624354 DLX4Q92988 240 aaPredicted RBP6.71□□□□□ -1.34
VCL-207ENST00000624354 HLA-DRB4X5D2U9 266 aa6.71□□□□□ -1.34
VCL-207ENST00000624354 OOSP1A8MZH6 123 aa6.71□□□□□ -1.34
VCL-207ENST00000624354 PRAC2D3DTV9 90 aa6.71□□□□□ -1.34
VCL-207ENST00000624354 Q8N6K4 173 aa6.71□□□□□ -1.34
VCL-207ENST00000624354 MAPKAPK5-AS1Q8N8E1 139 aa6.71□□□□□ -1.34
VCL-207ENST00000624354 PPDPFLQ8WWR9 84 aa6.71□□□□□ -1.34
VCL-207ENST00000624354 TMEM160Q9NX00 188 aa6.71□□□□□ -1.34
VCL-207ENST00000624354 IGHV7-81A0A0B4J1V7 117 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 RBAKDNA6NC62 111 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 HOXA3O43365 443 aaPredicted RBP6.7□□□□□ -1.34
VCL-207ENST00000624354 GATA1P15976 413 aaPredicted RBP6.7□□□□□ -1.34
VCL-207ENST00000624354 SMCPP49901 116 aaPredicted RBP6.7□□□□□ -1.34
VCL-207ENST00000624354 IL17RELQ6ZVW7 336 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 Q8N8P6 123 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 SLC50A1Q9BRV3 221 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 SORL1Q92673 2214 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 ABCA2Q9BZC7 2435 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 ZANQ9Y493 2812 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 TMEM8BA6NDV4 472 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 BUB3O43684 328 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 EBI3Q14213 229 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 CDSNQ15517 529 aa6.7□□□□□ -1.34
VCL-207ENST00000624354 C15orf32Q32M92 178 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms