RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 UBE2WQ96B02 151 aa6.54□□□□□ -1.36
ALMS1-208ENST00000620466 MRPL35Q9NZE8 188 aaKnown RBP6.54□□□□□ -1.36
ALMS1-208ENST00000620466 LRP4O75096 1905 aa6.54□□□□□ -1.36
ALMS1-208ENST00000620466 UTF1Q5T230 341 aa6.54□□□□□ -1.36
ALMS1-208ENST00000620466 NEGR1Q7Z3B1 354 aa6.54□□□□□ -1.36
ALMS1-208ENST00000620466 CCL25O15444 150 aa6.54□□□□□ -1.36
ALMS1-208ENST00000620466 SPINK8P0C7L1 97 aa6.54□□□□□ -1.36
ALMS1-208ENST00000620466 MRPL36Q9P0J6 103 aaKnown RBP6.54□□□□□ -1.36
ALMS1-208ENST00000620466 BRWD1Q9NSI6 2320 aa6.54□□□□□ -1.36
ALMS1-208ENST00000620466 SVILO95425 2214 aa6.54□□□□□ -1.36
ALMS1-208ENST00000620466 SIVA1O15304 175 aa6.54□□□□□ -1.36
ALMS1-208ENST00000620466 GRNP28799 593 aaKnown RBP6.54□□□□□ -1.36
ALMS1-208ENST00000620466 C1orf229Q6ZS94 237 aaPredicted RBP6.54□□□□□ -1.36
ALMS1-208ENST00000620466 NPBQ8NG41 125 aa6.54□□□□□ -1.36
ALMS1-208ENST00000620466 K7EIM0 57 aa6.54□□□□□ -1.36
ALMS1-208ENST00000620466 SOCS3O14543 225 aa6.54□□□□□ -1.36
ALMS1-208ENST00000620466 NDUFS5O43920 106 aa6.54□□□□□ -1.36
ALMS1-208ENST00000620466 NXPH4O95158 308 aa6.54□□□□□ -1.36
ALMS1-208ENST00000620466 HLA-DRB4P13762 266 aa6.54□□□□□ -1.36
ALMS1-208ENST00000620466 HLA-DRB4X5D2U9 266 aa6.54□□□□□ -1.36
ALMS1-208ENST00000620466 A0A0J9YY99 117 aa6.53□□□□□ -1.36
ALMS1-208ENST00000620466 IGHV7-4-1A0A0J9YVY3 117 aa6.53□□□□□ -1.36
ALMS1-208ENST00000620466 ANGP03950 147 aaKnown RBP6.53□□□□□ -1.36
ALMS1-208ENST00000620466 IGKV2D-24A0A075B6R9 120 aa6.53□□□□□ -1.36
ALMS1-208ENST00000620466 TEX22C9J3V5 150 aa6.53□□□□□ -1.36
ALMS1-208ENST00000620466 K7EP13 123 aa6.53□□□□□ -1.36
ALMS1-208ENST00000620466 RPL18AQ02543 176 aaKnown RBP6.53□□□□□ -1.36
ALMS1-208ENST00000620466 OR11H6Q8NGC7 330 aa6.53□□□□□ -1.36
ALMS1-208ENST00000620466 NCKAP5O14513 1909 aa6.53□□□□□ -1.36
ALMS1-208ENST00000620466 DOCK11Q5JSL3 2073 aa6.53□□□□□ -1.36
ALMS1-208ENST00000620466 CEP290O15078 2479 aa6.53□□□□□ -1.36
ALMS1-208ENST00000620466 DNAJC13O75165 2243 aa6.52□□□□□ -1.37
ALMS1-208ENST00000620466 TAL2Q16559 108 aa6.52□□□□□ -1.37
ALMS1-208ENST00000620466 NOP10Q9NPE3 64 aaKnown RBP6.52□□□□□ -1.37
ALMS1-208ENST00000620466 TMEM258P61165 79 aa6.52□□□□□ -1.37
ALMS1-208ENST00000620466 AHCTF1Q8WYP5 2266 aa6.52□□□□□ -1.37
ALMS1-208ENST00000620466 RBAKDNA6NC62 111 aa6.52□□□□□ -1.37
ALMS1-208ENST00000620466 C10orf142B7Z368 130 aa6.52□□□□□ -1.37
ALMS1-208ENST00000620466 CRLF1O75462 422 aa6.52□□□□□ -1.37
ALMS1-208ENST00000620466 FOXE3Q13461 319 aa6.52□□□□□ -1.37
ALMS1-208ENST00000620466 Q6ZQT7 251 aa6.52□□□□□ -1.37
ALMS1-208ENST00000620466 DSCR8Q96T75 97 aa6.52□□□□□ -1.37
ALMS1-208ENST00000620466 SMIM2Q9BVW6 85 aa6.52□□□□□ -1.37
ALMS1-208ENST00000620466 PROP1O75360 226 aa6.52□□□□□ -1.37
ALMS1-208ENST00000620466 GATA1P15976 413 aaPredicted RBP6.52□□□□□ -1.37
ALMS1-208ENST00000620466 UBE2BP63146 152 aa6.52□□□□□ -1.37
ALMS1-208ENST00000620466 RTTNQ86VV8 2226 aa6.52□□□□□ -1.37
ALMS1-208ENST00000620466 WI2-2373I1.2A0A1W2PRP0 233 aa6.52□□□□□ -1.37
ALMS1-208ENST00000620466 INAFM2P0DMQ5 153 aa6.52□□□□□ -1.37
ALMS1-208ENST00000620466 PCP2Q8IVA1 136 aa6.52□□□□□ -1.37
ALMS1-208ENST00000620466 ATP6V0BQ99437 205 aa6.52□□□□□ -1.37
ALMS1-208ENST00000620466 HEATR1Q9H583 2144 aaKnown RBP6.51□□□□□ -1.37
ALMS1-208ENST00000620466 IGKV1-17P01599 117 aa6.51□□□□□ -1.37
ALMS1-208ENST00000620466 RNASE13Q5GAN3 156 aaKnown RBP6.51□□□□□ -1.37
ALMS1-208ENST00000620466 DEFB125Q8N687 156 aa6.51□□□□□ -1.37
ALMS1-208ENST00000620466 CACNA1DQ01668 2161 aa6.51□□□□□ -1.37
ALMS1-208ENST00000620466 IGLV11-55A0A075B6I3 123 aa6.51□□□□□ -1.37
ALMS1-208ENST00000620466 IGLV2-8P01709 118 aa6.51□□□□□ -1.37
ALMS1-208ENST00000620466 C9orf66Q5T8R8 295 aa6.51□□□□□ -1.37
ALMS1-208ENST00000620466 LINC01545Q5VT33 79 aa6.51□□□□□ -1.37
ALMS1-208ENST00000620466 DEFB105AQ8NG35 78 aa6.51□□□□□ -1.37
ALMS1-208ENST00000620466 AGPAT4-IT1Q9H0P7 198 aa6.51□□□□□ -1.37
ALMS1-208ENST00000620466 PCNX3Q9H6A9 2034 aa6.51□□□□□ -1.37
ALMS1-208ENST00000620466 PCDH15Q96QU1 1955 aa6.51□□□□□ -1.37
ALMS1-208ENST00000620466 DEFB112Q30KQ8 113 aa6.51□□□□□ -1.37
ALMS1-208ENST00000620466 IGKV1D-37A0A075B6S9 117 aa6.51□□□□□ -1.37
ALMS1-208ENST00000620466 CCL24O00175 119 aa6.51□□□□□ -1.37
ALMS1-208ENST00000620466 SPANXA1Q9NS26 97 aa6.51□□□□□ -1.37
ALMS1-208ENST00000620466 DEFB113Q30KQ7 82 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 VPREB3Q9UKI3 123 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 IGF2-ASQ6U949 168 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 TRIOBPQ9H2D6 2365 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 F8W1H4 67 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 ZNF407Q9C0G0 2248 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 SDHAF1A6NFY7 115 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 F8VRH5 84 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 Q9HAA7 133 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 GNRH2O43555 120 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 PRB1P04280 392 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 HERVK_113P63121 156 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 FOXI2Q6ZQN5 318 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 BOD1L2Q8IYS8 172 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 IGHV7-81A0A0B4J1V7 117 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 IGHV4-59P01825 116 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 DEFB136Q30KP8 78 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 ANKRD39Q53RE8 183 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 MRPL53Q96EL3 112 aaKnown RBP6.5□□□□□ -1.37
ALMS1-208ENST00000620466 C20orf78Q9BR46 151 aa6.5□□□□□ -1.37
ALMS1-208ENST00000620466 H3BUA1 57 aa6.49□□□□□ -1.37
ALMS1-208ENST00000620466 SPRY2O43597 315 aa6.49□□□□□ -1.37
ALMS1-208ENST00000620466 MSRB1Q9NZV6 116 aa6.49□□□□□ -1.37
ALMS1-208ENST00000620466 C19orf71A6NCJ1 209 aa6.49□□□□□ -1.37
ALMS1-208ENST00000620466 F6UB75 175 aa6.49□□□□□ -1.37
ALMS1-208ENST00000620466 XCL1P47992 114 aa6.49□□□□□ -1.37
ALMS1-208ENST00000620466 ELANEP08246 267 aa6.49□□□□□ -1.37
ALMS1-208ENST00000620466 GDF5OSQ5U4N7 250 aa6.49□□□□□ -1.37
ALMS1-208ENST00000620466 RHOHQ15669 191 aa6.49□□□□□ -1.37
ALMS1-208ENST00000620466 CTSGP08311 255 aa6.49□□□□□ -1.37
ALMS1-208ENST00000620466 SLURP1P55000 103 aa6.49□□□□□ -1.37
ALMS1-208ENST00000620466 C12orf74Q32Q52 190 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms