RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 OR10J6PQ8NGY7 276 aa15.29■□□□□ 0.04
SDHA-220ENST00000617470 FAM19A4Q96LR4 140 aa15.29■□□□□ 0.04
SDHA-220ENST00000617470 MCRIP2Q9BUT9 160 aaKnown RBP15.29■□□□□ 0.04
SDHA-220ENST00000617470 LENEPQ9Y5L5 61 aa15.29■□□□□ 0.04
SDHA-220ENST00000617470 ORM1P02763 201 aa15.28■□□□□ 0.04
SDHA-220ENST00000617470 IGLC6P0CF74 106 aa15.28■□□□□ 0.04
SDHA-220ENST00000617470 ZFAND2AQ8N6M9 145 aa15.28■□□□□ 0.04
SDHA-220ENST00000617470 GATD1Q8NB37 220 aa15.28■□□□□ 0.04
SDHA-220ENST00000617470 PACRGQ96M98 296 aaPredicted RBP15.28■□□□□ 0.04
SDHA-220ENST00000617470 TPPP3Q9BW30 176 aa15.28■□□□□ 0.04
SDHA-220ENST00000617470 IGKV3D-20A0A0C4DH25 116 aa15.27■□□□□ 0.04
SDHA-220ENST00000617470 SERF1AO75920 110 aa15.27■□□□□ 0.04
SDHA-220ENST00000617470 RPS20P60866 119 aaKnown RBP15.27■□□□□ 0.04
SDHA-220ENST00000617470 C9orf66Q5T8R8 295 aa15.27■□□□□ 0.04
SDHA-220ENST00000617470 ALKBH7Q9BT30 221 aaPredicted RBP15.27■□□□□ 0.04
SDHA-220ENST00000617470 GSN-AS1Q9NRJ2 163 aa15.27■□□□□ 0.04
SDHA-220ENST00000617470 K7EQG2 157 aa15.27■□□□□ 0.03
SDHA-220ENST00000617470 ESDP10768 282 aa15.27■□□□□ 0.03
SDHA-220ENST00000617470 HIST1H1AQ02539 215 aaPredicted RBP15.27■□□□□ 0.03
SDHA-220ENST00000617470 OR10J3Q5JRS4 329 aa15.27■□□□□ 0.03
SDHA-220ENST00000617470 SIGLEC8Q9NYZ4 499 aa15.27■□□□□ 0.03
SDHA-220ENST00000617470 CTRLP40313 264 aa15.26■□□□□ 0.03
SDHA-220ENST00000617470 TFPI2P48307 235 aa15.26■□□□□ 0.03
SDHA-220ENST00000617470 RIGQ13278 110 aa15.26■□□□□ 0.03
SDHA-220ENST00000617470 SAMD13Q5VXD3 122 aa15.26■□□□□ 0.03
SDHA-220ENST00000617470 ID1P41134 155 aa15.25■□□□□ 0.03
SDHA-220ENST00000617470 DEFB114Q30KQ6 69 aa15.25■□□□□ 0.03
SDHA-220ENST00000617470 BAGE3Q86Y29 109 aa15.25■□□□□ 0.03
SDHA-220ENST00000617470 C18orf32Q8TCD1 76 aa15.25■□□□□ 0.03
SDHA-220ENST00000617470 RCHY1Q96PM5 261 aa15.25■□□□□ 0.03
SDHA-220ENST00000617470 CD300EQ496F6 205 aaPredicted RBP15.25■□□□□ 0.03
SDHA-220ENST00000617470 NOTCH3Q9UM47 2321 aa15.25■□□□□ 0.03
SDHA-220ENST00000617470 MUC21A0A0G2JKD1 596 aa15.24■□□□□ 0.03
SDHA-220ENST00000617470 MUC21A0A140T8X8 626 aa15.24■□□□□ 0.03
SDHA-220ENST00000617470 INSL3P51460 131 aa15.24■□□□□ 0.03
SDHA-220ENST00000617470 IQCJQ1A5X6 159 aa15.24■□□□□ 0.03
SDHA-220ENST00000617470 MUC21Q5SSG8 566 aa15.24■□□□□ 0.03
SDHA-220ENST00000617470 FER1L6-AS1Q8NA97 138 aa15.24■□□□□ 0.03
SDHA-220ENST00000617470 LOC102724200A0A096LPH7 203 aaPredicted RBP15.24■□□□□ 0.03
SDHA-220ENST00000617470 ZNF688P0C7X2 276 aa15.24■□□□□ 0.03
SDHA-220ENST00000617470 OXLD1Q5BKU9 147 aa15.24■□□□□ 0.03
SDHA-220ENST00000617470 A0A1B0GW15 77 aa15.23■□□□□ 0.03
SDHA-220ENST00000617470 IGLV1-51P01701 117 aa15.23■□□□□ 0.03
SDHA-220ENST00000617470 KIR3DS1Q14943 382 aa15.23■□□□□ 0.03
SDHA-220ENST00000617470 APRG1Q8IVJ8 170 aa15.23■□□□□ 0.03
SDHA-220ENST00000617470 TMEM61Q8N0U2 210 aa15.23■□□□□ 0.03
SDHA-220ENST00000617470 TMEM18Q96B42 140 aa15.23■□□□□ 0.03
SDHA-220ENST00000617470 PKD1L1Q8TDX9 2849 aa15.23■□□□□ 0.03
SDHA-220ENST00000617470 ZNF493Q6ZR52 646 aa15.22■□□□□ 0.03
SDHA-220ENST00000617470 J3KRW8 73 aa15.22■□□□□ 0.03
SDHA-220ENST00000617470 SSTP61278 116 aa15.22■□□□□ 0.03
SDHA-220ENST00000617470 PSMG4Q5JS54 123 aa15.22■□□□□ 0.03
SDHA-220ENST00000617470 CDPF1Q6NVV7 123 aa15.22■□□□□ 0.03
SDHA-220ENST00000617470 DNHD1Q96M86 4753 aa15.21■□□□□ 0.03
SDHA-220ENST00000617470 BORCS7Q96B45 105 aa15.21■□□□□ 0.03
SDHA-220ENST00000617470 CNFNQ9BYD5 112 aa15.21■□□□□ 0.03
SDHA-220ENST00000617470 TRBV7-9A0A0J9YWB2 115 aa15.2■□□□□ 0.02
SDHA-220ENST00000617470 DNLZQ5SXM8 178 aa15.19■□□□□ 0.02
SDHA-220ENST00000617470 MSRB1Q9NZV6 116 aa15.19■□□□□ 0.02
SDHA-220ENST00000617470 CMYA5Q8N3K9 4069 aa15.19■□□□□ 0.02
SDHA-220ENST00000617470 A0A0J9YX75 114 aa15.18■□□□□ 0.02
SDHA-220ENST00000617470 LINC00587B1AMM8 73 aa15.18■□□□□ 0.02
SDHA-220ENST00000617470 NTF3P20783 257 aa15.18■□□□□ 0.02
SDHA-220ENST00000617470 SNRPD3P62318 126 aaKnown RBP15.18■□□□□ 0.02
SDHA-220ENST00000617470 PAFAH1B2P68402 229 aa15.18■□□□□ 0.02
SDHA-220ENST00000617470 GPX1P07203 203 aa15.18■□□□□ 0.02
SDHA-220ENST00000617470 RNASE4P34096 147 aaKnown RBP15.18■□□□□ 0.02
SDHA-220ENST00000617470 OR2K2Q8NGT1 345 aa15.18■□□□□ 0.02
SDHA-220ENST00000617470 URB1-AS1Q96HZ7 61 aa15.18■□□□□ 0.02
SDHA-220ENST00000617470 TRAV25A0A0B4J276 109 aa15.17■□□□□ 0.02
SDHA-220ENST00000617470 TRAV21A0A0B4J279 112 aa15.17■□□□□ 0.02
SDHA-220ENST00000617470 KLLNB2CW77 178 aa15.17■□□□□ 0.02
SDHA-220ENST00000617470 G3V4G9 280 aa15.17■□□□□ 0.02
SDHA-220ENST00000617470 KCNS1Q96KK3 526 aa15.17■□□□□ 0.02
SDHA-220ENST00000617470 JOSD1Q15040 202 aaPredicted RBP15.16■□□□□ 0.02
SDHA-220ENST00000617470 TWIST1Q15672 202 aa15.16■□□□□ 0.02
SDHA-220ENST00000617470 CTAG1AP78358 180 aa15.15■□□□□ 0.02
SDHA-220ENST00000617470 FAM104BQ5XKR9 115 aa15.15■□□□□ 0.02
SDHA-220ENST00000617470 AMN1Q8IY45 258 aa15.15■□□□□ 0.02
SDHA-220ENST00000617470 SPAG8Q99932 426 aaPredicted RBP15.15■□□□□ 0.02
SDHA-220ENST00000617470 Q6ZWC4 215 aa15.15■□□□□ 0.02
SDHA-220ENST00000617470 OR4C46A6NHA9 309 aa15.14■□□□□ 0.01
SDHA-220ENST00000617470 WIPF1O43516 503 aa15.14■□□□□ 0.01
SDHA-220ENST00000617470 OR10AG1Q8NH19 301 aa15.14■□□□□ 0.01
SDHA-220ENST00000617470 NAGKQ9UJ70 344 aa15.14■□□□□ 0.01
SDHA-220ENST00000617470 SNAI2O43623 268 aa15.13■□□□□ 0.01
SDHA-220ENST00000617470 OR5AL1P0C617 328 aa15.13■□□□□ 0.01
SDHA-220ENST00000617470 ANXA2RQ3ZCQ2 193 aa15.13■□□□□ 0.01
SDHA-220ENST00000617470 ODF3Q96PU9 254 aa15.13■□□□□ 0.01
SDHA-220ENST00000617470 ZNF324O75467 553 aaPredicted RBP15.13■□□□□ 0.01
SDHA-220ENST00000617470 DMRTA1Q5VZB9 504 aa15.13■□□□□ 0.01
SDHA-220ENST00000617470 NIT1Q86X76 327 aa15.13■□□□□ 0.01
SDHA-220ENST00000617470 SAMD10Q9BYL1 202 aa15.13■□□□□ 0.01
SDHA-220ENST00000617470 TMEM191AQ9H0A3 160 aa15.13■□□□□ 0.01
SDHA-220ENST00000617470 U3KQK5 164 aa15.13■□□□□ 0.01
SDHA-220ENST00000617470 AGRNO00468 2067 aa15.12■□□□□ 0.01
SDHA-220ENST00000617470 TRAV2A0A0B4J234 112 aa15.12■□□□□ 0.01
SDHA-220ENST00000617470 MRPL51Q4U2R6 128 aaKnown RBP15.12■□□□□ 0.01
SDHA-220ENST00000617470 SAMD5Q5TGI4 173 aa15.12■□□□□ 0.01
SDHA-220ENST00000617470 FAM19A2Q8N3H0 131 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms