RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 AZU1P20160 251 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 PRR20EP86478 221 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 PRR20CP86479 221 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 PRR20DP86480 221 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 PRR20BP86481 221 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 PRR20AP86496 221 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 FXYD5Q96DB9 178 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 ZNF625Q96I27 306 aaPredicted RBP7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 AGPAT4-IT1Q9H0P7 198 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 DNAJC9-AS1A6NH13 148 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 DEFB4AO15263 64 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 GP9P14770 177 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 C8orf31Q8N9H6 132 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 ZNRF2Q8NHG8 242 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 TMEM158Q8WZ71 300 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 PIFOQ8TCI5 191 aa7.91□□□□□ -1.14
SMARCA1-205ENST00000617310 TRAV2A0A0B4J234 112 aa7.91□□□□□ -1.14
SMARCA1-205ENST00000617310 COLCA2A8K830 154 aa7.91□□□□□ -1.14
SMARCA1-205ENST00000617310 SMIM13P0DJ93 91 aa7.91□□□□□ -1.14
SMARCA1-205ENST00000617310 LAGE3Q14657 143 aa7.91□□□□□ -1.14
SMARCA1-205ENST00000617310 ODF3L1Q8IXM7 274 aa7.91□□□□□ -1.14
SMARCA1-205ENST00000617310 IGLV11-55A0A075B6I3 123 aa7.91□□□□□ -1.14
SMARCA1-205ENST00000617310 DNAL4O96015 105 aa7.91□□□□□ -1.14
SMARCA1-205ENST00000617310 LINC00158P58513 81 aa7.91□□□□□ -1.14
SMARCA1-205ENST00000617310 ATP5L2Q7Z4Y8 100 aa7.91□□□□□ -1.14
SMARCA1-205ENST00000617310 IGF2BP2-AS1Q96M15 143 aa7.91□□□□□ -1.14
SMARCA1-205ENST00000617310 GAGE10A6NGK3 116 aa7.9□□□□□ -1.14
SMARCA1-205ENST00000617310 VCYO14598 125 aa7.9□□□□□ -1.14
SMARCA1-205ENST00000617310 GNRH2O43555 120 aa7.9□□□□□ -1.14
SMARCA1-205ENST00000617310 IL15RAQ13261 267 aa7.9□□□□□ -1.14
SMARCA1-205ENST00000617310 ZC2HC1AQ96GY0 325 aa7.9□□□□□ -1.14
SMARCA1-205ENST00000617310 CHTOPQ9Y3Y2 248 aaKnown RBP7.9□□□□□ -1.14
SMARCA1-205ENST00000617310 DPM2O94777 84 aa7.9□□□□□ -1.14
SMARCA1-205ENST00000617310 PRSS57Q6UWY2 283 aa7.9□□□□□ -1.14
SMARCA1-205ENST00000617310 NOP10Q9NPE3 64 aaKnown RBP7.9□□□□□ -1.14
SMARCA1-205ENST00000617310 I3L2K1 104 aa7.9□□□□□ -1.15
SMARCA1-205ENST00000617310 FABP2P12104 132 aa7.9□□□□□ -1.15
SMARCA1-205ENST00000617310 LOXL1Q08397 574 aaPredicted RBP7.9□□□□□ -1.15
SMARCA1-205ENST00000617310 CLPSL2Q6UWE3 100 aa7.9□□□□□ -1.15
SMARCA1-205ENST00000617310 THAP8Q8NA92 274 aa7.9□□□□□ -1.15
SMARCA1-205ENST00000617310 ZNF815PA8K554 130 aa7.89□□□□□ -1.15
SMARCA1-205ENST00000617310 JOSD1Q15040 202 aaPredicted RBP7.89□□□□□ -1.15
SMARCA1-205ENST00000617310 UNQ9165/PRO28630Q6UXU0 137 aa7.89□□□□□ -1.15
SMARCA1-205ENST00000617310 TMEM190Q8WZ59 177 aa7.89□□□□□ -1.15
SMARCA1-205ENST00000617310 IGHV4-31P0DP07 118 aa7.89□□□□□ -1.15
SMARCA1-205ENST00000617310 APOC4P55056 127 aa7.89□□□□□ -1.15
SMARCA1-205ENST00000617310 CKS1BP61024 79 aa7.89□□□□□ -1.15
SMARCA1-205ENST00000617310 Q6ZPA2 131 aa7.89□□□□□ -1.15
SMARCA1-205ENST00000617310 OR2K2Q8NGT1 345 aa7.89□□□□□ -1.15
SMARCA1-205ENST00000617310 KIAA1549LQ6ZVL6 1849 aa7.89□□□□□ -1.15
SMARCA1-205ENST00000617310 COL4A2P08572 1712 aa7.89□□□□□ -1.15
SMARCA1-205ENST00000617310 NPBQ8NG41 125 aa7.89□□□□□ -1.15
SMARCA1-205ENST00000617310 TYMSP04818 313 aa7.89□□□□□ -1.15
SMARCA1-205ENST00000617310 C6orf226Q5I0X4 101 aa7.89□□□□□ -1.15
SMARCA1-205ENST00000617310 SMR3AQ99954 134 aa7.89□□□□□ -1.15
SMARCA1-205ENST00000617310 IGKV1OR2-108A0A075B7D4 117 aa7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 TNFRSF6BO95407 300 aa7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 GAGE6Q13070 117 aa7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 C10orf99Q6UWK7 81 aa7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 TEX43Q6ZNM6 134 aa7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 TMEM61Q8N0U2 210 aa7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 BBC3Q96PG8 261 aaPredicted RBP7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 HIST1H2BLQ99880 126 aa7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 BOD1L1Q8NFC6 3051 aa7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 TEP1Q99973 2627 aaKnown RBP7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 HELZ2Q9BYK8 2649 aaKnown RBP7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 ZFHX3Q15911 3703 aa7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 CLPSL1A2RUU4 121 aa7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 TEX22C9J3V5 150 aa7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 SPXQ9BT56 116 aa7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 MUC22E2RYF6 1773 aaPredicted RBP7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 SDHAF1A6NFY7 115 aa7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 IGHG2P01859 326 aa7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 PATE2Q6UY27 113 aa7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 NHP2Q9NX24 153 aaKnown RBP7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 DMRT1Q9Y5R6 373 aa7.88□□□□□ -1.15
SMARCA1-205ENST00000617310 RNASE13Q5GAN3 156 aaKnown RBP7.87□□□□□ -1.15
SMARCA1-205ENST00000617310 TMEM242Q9NWH2 141 aa7.87□□□□□ -1.15
SMARCA1-205ENST00000617310 H3BUA1 57 aa7.87□□□□□ -1.15
SMARCA1-205ENST00000617310 IGLV2-14P01704 120 aa7.87□□□□□ -1.15
SMARCA1-205ENST00000617310 AMBPP02760 352 aa7.87□□□□□ -1.15
SMARCA1-205ENST00000617310 DEFB135Q30KP9 77 aa7.87□□□□□ -1.15
SMARCA1-205ENST00000617310 CFAP46Q8IYW2 2715 aa7.87□□□□□ -1.15
SMARCA1-205ENST00000617310 CSMD1Q96PZ7 3565 aa7.87□□□□□ -1.15
SMARCA1-205ENST00000617310 A0A1B0GW64 132 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 IGKCP01834 107 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 ZC2HC1BQ5TFG8 222 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 C1orf229Q6ZS94 237 aaPredicted RBP7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 WIPF2Q8TF74 440 aaPredicted RBP7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 ZMAT4Q9H898 229 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 hDV102S1A0JD36 115 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 C2orf70A6NJV1 201 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 PRAC2D3DTV9 90 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 BUB3O43684 328 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 PLA2G2AP14555 144 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 LINC00518Q8N0U6 118 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 ATP6V0BQ99437 205 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 NAA38Q9BRA0 125 aaKnown RBP7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 LY96Q9Y6Y9 160 aa7.86□□□□□ -1.15
SMARCA1-205ENST00000617310 A0A1B0GV72 72 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms