RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 RNF185Q96GF1 192 aa17■□□□□ 0.31
POLR2J3-220ENST00000613744 SMKR1H3BMG3 65 aa17■□□□□ 0.31
POLR2J3-220ENST00000613744 APOMO95445 188 aa17■□□□□ 0.31
POLR2J3-220ENST00000613744 FOXI1Q12951 378 aa17■□□□□ 0.31
POLR2J3-220ENST00000613744 TTTY13Q9BZ97 58 aa17■□□□□ 0.31
POLR2J3-220ENST00000613744 NAV3Q8IVL0 2385 aa16.99■□□□□ 0.31
POLR2J3-220ENST00000613744 DIAPH2-AS1Q14236 149 aa16.99■□□□□ 0.31
POLR2J3-220ENST00000613744 WFDC3Q8IUB2 231 aa16.99■□□□□ 0.31
POLR2J3-220ENST00000613744 TMEM158Q8WZ71 300 aa16.99■□□□□ 0.31
POLR2J3-220ENST00000613744 C17orf77Q96MU5 243 aa16.99■□□□□ 0.31
POLR2J3-220ENST00000613744 OTOGQ6ZRI0 2925 aa16.99■□□□□ 0.31
POLR2J3-220ENST00000613744 ABCA2Q9BZC7 2435 aa16.99■□□□□ 0.31
POLR2J3-220ENST00000613744 ZANQ9Y493 2812 aa16.99■□□□□ 0.31
POLR2J3-220ENST00000613744 IGKV1-17P01599 117 aa16.98■□□□□ 0.31
POLR2J3-220ENST00000613744 Q8N8P6 123 aa16.98■□□□□ 0.31
POLR2J3-220ENST00000613744 TEX15Q9BXT5 2789 aa16.98■□□□□ 0.31
POLR2J3-220ENST00000613744 TRBV7-3A0A075B6L6 115 aa16.98■□□□□ 0.31
POLR2J3-220ENST00000613744 IGHV3-21A0A0B4J1V1 117 aa16.98■□□□□ 0.31
POLR2J3-220ENST00000613744 OR11H12B2RN74 326 aa16.98■□□□□ 0.31
POLR2J3-220ENST00000613744 OR11H1Q8NG94 326 aa16.98■□□□□ 0.31
POLR2J3-220ENST00000613744 OR11H2Q8NH07 326 aa16.98■□□□□ 0.31
POLR2J3-220ENST00000613744 CR1P17927 2039 aa16.98■□□□□ 0.31
POLR2J3-220ENST00000613744 TEX22C9J3V5 150 aa16.97■□□□□ 0.31
POLR2J3-220ENST00000613744 TNFRSF6BO95407 300 aa16.97■□□□□ 0.31
POLR2J3-220ENST00000613744 RBP4P02753 201 aa16.97■□□□□ 0.31
POLR2J3-220ENST00000613744 HIST1H4GQ99525 98 aa16.97■□□□□ 0.31
POLR2J3-220ENST00000613744 SIGLEC9Q9Y336 463 aa16.97■□□□□ 0.31
POLR2J3-220ENST00000613744 TMSB15BA0A087X1C1 80 aa16.97■□□□□ 0.31
POLR2J3-220ENST00000613744 TSPAN13O95857 204 aa16.97■□□□□ 0.31
POLR2J3-220ENST00000613744 C5orf64Q2M2E5 130 aa16.97■□□□□ 0.31
POLR2J3-220ENST00000613744 PLNP26678 52 aa16.96■□□□□ 0.31
POLR2J3-220ENST00000613744 PRB3Q04118 309 aaPredicted RBP16.96■□□□□ 0.31
POLR2J3-220ENST00000613744 ATP5G2Q06055 141 aa16.96■□□□□ 0.31
POLR2J3-220ENST00000613744 ONECUT1Q9UBC0 465 aa16.96■□□□□ 0.31
POLR2J3-220ENST00000613744 NCBP2LA6PVI3 153 aaKnown RBP16.95■□□□□ 0.3
POLR2J3-220ENST00000613744 DLX1P56177 255 aa16.95■□□□□ 0.3
POLR2J3-220ENST00000613744 CDIP1Q9H305 208 aa16.95■□□□□ 0.3
POLR2J3-220ENST00000613744 ENSAO43768 121 aaKnown RBP16.95■□□□□ 0.3
POLR2J3-220ENST00000613744 EGR2P11161 476 aaPredicted RBP16.95■□□□□ 0.3
POLR2J3-220ENST00000613744 CFAP126Q5VTH2 177 aa16.95■□□□□ 0.3
POLR2J3-220ENST00000613744 MAPKAPK5-AS1Q8N8E1 139 aa16.95■□□□□ 0.3
POLR2J3-220ENST00000613744 ZNF491Q8N8L2 437 aa16.95■□□□□ 0.3
POLR2J3-220ENST00000613744 RNF125Q96EQ8 232 aa16.95■□□□□ 0.3
POLR2J3-220ENST00000613744 PRR25Q96S07 402 aa16.95■□□□□ 0.3
POLR2J3-220ENST00000613744 ASCL2Q99929 193 aa16.95■□□□□ 0.3
POLR2J3-220ENST00000613744 A0A087WX48 190 aa16.94■□□□□ 0.3
POLR2J3-220ENST00000613744 M0R3E3 92 aa16.94■□□□□ 0.3
POLR2J3-220ENST00000613744 AMTNQ6UX39 209 aa16.94■□□□□ 0.3
POLR2J3-220ENST00000613744 MYOZ3Q8TDC0 251 aa16.94■□□□□ 0.3
POLR2J3-220ENST00000613744 FLNAP21333 2647 aaKnown RBP16.94■□□□□ 0.3
POLR2J3-220ENST00000613744 SPINK8P0C7L1 97 aa16.93■□□□□ 0.3
POLR2J3-220ENST00000613744 INSL3P51460 131 aa16.93■□□□□ 0.3
POLR2J3-220ENST00000613744 DLX4Q92988 240 aaPredicted RBP16.93■□□□□ 0.3
POLR2J3-220ENST00000613744 C20orf78Q9BR46 151 aa16.93■□□□□ 0.3
POLR2J3-220ENST00000613744 WNK2Q9Y3S1 2297 aa16.93■□□□□ 0.3
POLR2J3-220ENST00000613744 DLX6P56179 175 aa16.93■□□□□ 0.3
POLR2J3-220ENST00000613744 SYT8Q8NBV8 401 aa16.93■□□□□ 0.3
POLR2J3-220ENST00000613744 TMEM160Q9NX00 188 aa16.93■□□□□ 0.3
POLR2J3-220ENST00000613744 IGLV2-18A0A075B6J9 118 aa16.92■□□□□ 0.3
POLR2J3-220ENST00000613744 TRAV40A0A0B4J280 105 aa16.92■□□□□ 0.3
POLR2J3-220ENST00000613744 PPP1R27Q86WC6 154 aa16.92■□□□□ 0.3
POLR2J3-220ENST00000613744 RPEQ96AT9 228 aa16.92■□□□□ 0.3
POLR2J3-220ENST00000613744 MRPL35Q9NZE8 188 aaKnown RBP16.92■□□□□ 0.3
POLR2J3-220ENST00000613744 HOXA3O43365 443 aaPredicted RBP16.92■□□□□ 0.3
POLR2J3-220ENST00000613744 IGHV1-8P0DP01 117 aa16.91■□□□□ 0.3
POLR2J3-220ENST00000613744 IGHV4-31P0DP07 118 aa16.91■□□□□ 0.3
POLR2J3-220ENST00000613744 LYRM7Q5U5X0 104 aa16.91■□□□□ 0.3
POLR2J3-220ENST00000613744 LY6G5BQ8NDX9 201 aa16.91■□□□□ 0.3
POLR2J3-220ENST00000613744 ERG28Q9UKR5 140 aa16.91■□□□□ 0.3
POLR2J3-220ENST00000613744 TRAV12-1A0A0B4J245 112 aa16.9■□□□□ 0.3
POLR2J3-220ENST00000613744 A6NJY4 79 aa16.9■□□□□ 0.3
POLR2J3-220ENST00000613744 TGFAP01135 160 aa16.9■□□□□ 0.3
POLR2J3-220ENST00000613744 MSMBP08118 114 aa16.9■□□□□ 0.3
POLR2J3-220ENST00000613744 CREBBPQ92793 2442 aa16.9■□□□□ 0.3
POLR2J3-220ENST00000613744 B4DSR2 109 aa16.9■□□□□ 0.3
POLR2J3-220ENST00000613744 MORN3Q6PF18 240 aaPredicted RBP16.9■□□□□ 0.3
POLR2J3-220ENST00000613744 K7EIM0 57 aa16.89■□□□□ 0.29
POLR2J3-220ENST00000613744 IL4P05112 153 aa16.89■□□□□ 0.29
POLR2J3-220ENST00000613744 Q6ZUT4 128 aa16.89■□□□□ 0.29
POLR2J3-220ENST00000613744 LINC01356Q8N9X3 169 aa16.89■□□□□ 0.29
POLR2J3-220ENST00000613744 RNF5Q99942 180 aa16.89■□□□□ 0.29
POLR2J3-220ENST00000613744 ACANP16112 2415 aa16.89■□□□□ 0.29
POLR2J3-220ENST00000613744 MYMXA0A1B0GTQ4 84 aa16.89■□□□□ 0.29
POLR2J3-220ENST00000613744 HIF1ANQ9NWT6 349 aa16.89■□□□□ 0.29
POLR2J3-220ENST00000613744 LAGE3Q14657 143 aa16.88■□□□□ 0.29
POLR2J3-220ENST00000613744 PPDPFLQ8WWR9 84 aa16.88■□□□□ 0.29
POLR2J3-220ENST00000613744 APELAP0DMC3 54 aa16.87■□□□□ 0.29
POLR2J3-220ENST00000613744 COX7A1P24310 79 aa16.87■□□□□ 0.29
POLR2J3-220ENST00000613744 ABCA1O95477 2261 aa16.87■□□□□ 0.29
POLR2J3-220ENST00000613744 CSPG4Q6UVK1 2322 aa16.86■□□□□ 0.29
POLR2J3-220ENST00000613744 FABP5P3A8MUU1 101 aa16.86■□□□□ 0.29
POLR2J3-220ENST00000613744 H7C1H1 209 aa16.86■□□□□ 0.29
POLR2J3-220ENST00000613744 SMCPP49901 116 aaPredicted RBP16.86■□□□□ 0.29
POLR2J3-220ENST00000613744 ZNF575Q86XF7 245 aa16.86■□□□□ 0.29
POLR2J3-220ENST00000613744 SMR3AQ99954 134 aa16.86■□□□□ 0.29
POLR2J3-220ENST00000613744 IGHV3-72A0A0B4J1Y9 119 aa16.85■□□□□ 0.29
POLR2J3-220ENST00000613744 CNTFRP26992 372 aa16.85■□□□□ 0.29
POLR2J3-220ENST00000613744 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.85■□□□□ 0.297e-8■■■□□ 16.4
POLR2J3-220ENST00000613744 IGKV2-40A0A087WW87 121 aaPredicted RBP16.85■□□□□ 0.29
POLR2J3-220ENST00000613744 F8VRH5 84 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms