RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	TPPP3	Q9BW30	176 aa		10.66	□□□□□ -0.7
COPS7B-223	ENST00000611614	SIGLEC8	Q9NYZ4	499 aa		10.66	□□□□□ -0.7
COPS7B-223	ENST00000611614	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.66	□□□□□ -0.7
COPS7B-223	ENST00000611614	TEX15	Q9BXT5	2789 aa		10.66	□□□□□ -0.7
COPS7B-223	ENST00000611614	FLNA	P21333	2647 aa	Known RBP	10.66	□□□□□ -0.7
COPS7B-223	ENST00000611614		A0A096LNJ9	63 aa		10.65	□□□□□ -0.7
COPS7B-223	ENST00000611614	C9orf118	A6NHY6	69 aa		10.65	□□□□□ -0.7
COPS7B-223	ENST00000611614	BUB3	O43684	328 aa		10.65	□□□□□ -0.7
COPS7B-223	ENST00000611614	HBD	P02042	147 aa		10.65	□□□□□ -0.7
COPS7B-223	ENST00000611614	IFI27	P40305	119 aa	Predicted RBP	10.65	□□□□□ -0.7
COPS7B-223	ENST00000611614	SCGB2A2	Q13296	93 aa		10.65	□□□□□ -0.7
COPS7B-223	ENST00000611614	IGFL4	Q6B9Z1	124 aa		10.65	□□□□□ -0.7
COPS7B-223	ENST00000611614	CLEC19A	Q6UXS0	136 aa		10.65	□□□□□ -0.7
COPS7B-223	ENST00000611614	VGLL1	Q99990	258 aa		10.65	□□□□□ -0.7
COPS7B-223	ENST00000611614	TLN2	Q9Y4G6	2542 aa		10.65	□□□□□ -0.7
COPS7B-223	ENST00000611614	TRBV7-1	A0A0A6YYK4	115 aa		10.65	□□□□□ -0.7
COPS7B-223	ENST00000611614	GAGE10	A6NGK3	116 aa		10.65	□□□□□ -0.7
COPS7B-223	ENST00000611614		D6R8Y8	96 aa		10.65	□□□□□ -0.7
COPS7B-223	ENST00000611614	HLA-DMB	P28068	263 aa		10.65	□□□□□ -0.7
COPS7B-223	ENST00000611614	LYZL1	Q6UWQ5	148 aa		10.65	□□□□□ -0.7
COPS7B-223	ENST00000611614	OR8A1	Q8NGG7	326 aa		10.65	□□□□□ -0.7
COPS7B-223	ENST00000611614	TMSB15B	A0A087X1C1	80 aa		10.64	□□□□□ -0.71
COPS7B-223	ENST00000611614	CLPSL1	A2RUU4	121 aa		10.64	□□□□□ -0.71
COPS7B-223	ENST00000611614	ATP5G2	Q06055	141 aa		10.64	□□□□□ -0.71
COPS7B-223	ENST00000611614	UFSP1	Q6NVU6	142 aa		10.64	□□□□□ -0.71
COPS7B-223	ENST00000611614		Q8TAT8	98 aa		10.64	□□□□□ -0.71
COPS7B-223	ENST00000611614	FAM223B	A6NKX1	122 aa		10.63	□□□□□ -0.71
COPS7B-223	ENST00000611614	TRGV3	P03979	118 aa		10.63	□□□□□ -0.71
COPS7B-223	ENST00000611614	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.63	□□□□□ -0.71
COPS7B-223	ENST00000611614	FAM223A	Q8IWN6	122 aa		10.63	□□□□□ -0.71
COPS7B-223	ENST00000611614		H3BUA1	57 aa		10.63	□□□□□ -0.71
COPS7B-223	ENST00000611614	SRSF2	Q01130	221 aa	Known RBP	10.63	□□□□□ -0.71
COPS7B-223	ENST00000611614	ZNF80	P51504	273 aa	Predicted RBP	10.62	□□□□□ -0.71
COPS7B-223	ENST00000611614	SLC50A1	Q9BRV3	221 aa		10.62	□□□□□ -0.71
COPS7B-223	ENST00000611614	KRTAP1-1	Q07627	177 aa		10.62	□□□□□ -0.71
COPS7B-223	ENST00000611614	LINC01559	Q495D7	138 aa		10.62	□□□□□ -0.71
COPS7B-223	ENST00000611614	MRPL51	Q4U2R6	128 aa	Known RBP	10.62	□□□□□ -0.71
COPS7B-223	ENST00000611614	C19orf54	Q5BKX5	351 aa		10.62	□□□□□ -0.71
COPS7B-223	ENST00000611614		Q6ZS46	218 aa		10.62	□□□□□ -0.71
COPS7B-223	ENST00000611614	IFI27L1	Q96BM0	104 aa		10.62	□□□□□ -0.71
COPS7B-223	ENST00000611614	LOC389332	A0A1B0GUA5	103 aa		10.61	□□□□□ -0.71
COPS7B-223	ENST00000611614	TMEM213	A2RRL7	107 aa		10.61	□□□□□ -0.71
COPS7B-223	ENST00000611614	RBAKDN	A6NC62	111 aa		10.61	□□□□□ -0.71
COPS7B-223	ENST00000611614	CACNG7	P62955	275 aa		10.61	□□□□□ -0.71
COPS7B-223	ENST00000611614	AMN1	Q8IY45	258 aa		10.61	□□□□□ -0.71
COPS7B-223	ENST00000611614	TMEM86B	Q8N661	226 aa		10.61	□□□□□ -0.71
COPS7B-223	ENST00000611614	METTL26	Q96S19	204 aa		10.61	□□□□□ -0.71
COPS7B-223	ENST00000611614	ATP6V0B	Q99437	205 aa		10.61	□□□□□ -0.71
COPS7B-223	ENST00000611614	ZNF580	Q9UK33	172 aa		10.61	□□□□□ -0.71
COPS7B-223	ENST00000611614	IGHV3-66	A0A0C4DH42	116 aa		10.61	□□□□□ -0.71
COPS7B-223	ENST00000611614	PRAC2	D3DTV9	90 aa		10.61	□□□□□ -0.71
COPS7B-223	ENST00000611614		K7EP34	96 aa		10.61	□□□□□ -0.71
COPS7B-223	ENST00000611614	TM4SF20	Q53R12	229 aa		10.61	□□□□□ -0.71
COPS7B-223	ENST00000611614	USMG5	Q96IX5	58 aa		10.61	□□□□□ -0.71
COPS7B-223	ENST00000611614	MYO9A	B2RTY4	2548 aa		10.61	□□□□□ -0.71
COPS7B-223	ENST00000611614	LINC01546	A6NGU7	62 aa		10.6	□□□□□ -0.71
COPS7B-223	ENST00000611614	PPIF	P30405	207 aa	Known RBP	10.6	□□□□□ -0.71
COPS7B-223	ENST00000611614	ERCC8	Q13216	396 aa		10.6	□□□□□ -0.71
COPS7B-223	ENST00000611614	FAM106A	Q4KMX7	169 aa		10.6	□□□□□ -0.71
COPS7B-223	ENST00000611614	FER1L6-AS1	Q8NA97	138 aa		10.6	□□□□□ -0.71
COPS7B-223	ENST00000611614	DUX5	Q96PT3	197 aa		10.6	□□□□□ -0.71
COPS7B-223	ENST00000611614	SON	P18583	2426 aa	Known RBP	10.6	□□□□□ -0.71
COPS7B-223	ENST00000611614	SNAI2	O43623	268 aa		10.6	□□□□□ -0.71
COPS7B-223	ENST00000611614	BRI3	O95415	125 aa		10.6	□□□□□ -0.71
COPS7B-223	ENST00000611614	IGLC6	P0CF74	106 aa		10.6	□□□□□ -0.71
COPS7B-223	ENST00000611614	CKS2	P33552	79 aa		10.6	□□□□□ -0.71
COPS7B-223	ENST00000611614	KIR3DS1	Q14943	382 aa		10.6	□□□□□ -0.71
COPS7B-223	ENST00000611614	ADAMTSL5	Q6ZMM2	481 aa		10.6	□□□□□ -0.71
COPS7B-223	ENST00000611614	RNF182	Q8N6D2	247 aa		10.6	□□□□□ -0.71
COPS7B-223	ENST00000611614	OR5A1	Q8NGJ0	315 aa		10.6	□□□□□ -0.71
COPS7B-223	ENST00000611614		U3KQE9	123 aa		10.6	□□□□□ -0.71
COPS7B-223	ENST00000611614	ACAN	P16112	2415 aa		10.6	□□□□□ -0.71
COPS7B-223	ENST00000611614		A0A0G2JLM5	398 aa		10.59	□□□□□ -0.71
COPS7B-223	ENST00000611614	FABP5P3	A8MUU1	101 aa		10.59	□□□□□ -0.71
COPS7B-223	ENST00000611614	IGHV3OR16-13	A0A075B7E8	117 aa		10.59	□□□□□ -0.71
COPS7B-223	ENST00000611614	IGHV3-74	A0A0B4J1X5	117 aa		10.59	□□□□□ -0.71
COPS7B-223	ENST00000611614	FOXE3	Q13461	319 aa		10.59	□□□□□ -0.71
COPS7B-223	ENST00000611614	CSTL1	Q9H114	145 aa		10.59	□□□□□ -0.71
COPS7B-223	ENST00000611614	ZNF207	O43670	478 aa	Known RBP	10.58	□□□□□ -0.72
COPS7B-223	ENST00000611614	ORM1	P02763	201 aa		10.58	□□□□□ -0.72
COPS7B-223	ENST00000611614	ZNF575	Q86XF7	245 aa		10.58	□□□□□ -0.72
COPS7B-223	ENST00000611614	OR2K2	Q8NGT1	345 aa		10.58	□□□□□ -0.72
COPS7B-223	ENST00000611614	MRPL53	Q96EL3	112 aa	Known RBP	10.58	□□□□□ -0.72
COPS7B-223	ENST00000611614	MAP1LC3A	Q9H492	121 aa		10.58	□□□□□ -0.72
COPS7B-223	ENST00000611614	TMEM160	Q9NX00	188 aa		10.58	□□□□□ -0.72
COPS7B-223	ENST00000611614	TRAV8-2	A0A0B4J237	113 aa		10.58	□□□□□ -0.72
COPS7B-223	ENST00000611614	HIGD1B	Q9P298	99 aa		10.58	□□□□□ -0.72
COPS7B-223	ENST00000611614	IGHV3-49	A0A0A0MS15	119 aa		10.57	□□□□□ -0.72
COPS7B-223	ENST00000611614	TWIST1	Q15672	202 aa		10.57	□□□□□ -0.72
COPS7B-223	ENST00000611614	JMJD8	Q96S16	334 aa		10.57	□□□□□ -0.72
COPS7B-223	ENST00000611614	CNFN	Q9BYD5	112 aa		10.57	□□□□□ -0.72
COPS7B-223	ENST00000611614		H3BUT2	72 aa		10.57	□□□□□ -0.72
COPS7B-223	ENST00000611614	NPY	P01303	97 aa		10.57	□□□□□ -0.72
COPS7B-223	ENST00000611614	IGLV1-40	P01703	118 aa		10.57	□□□□□ -0.72
COPS7B-223	ENST00000611614	SRD5A1	P18405	259 aa		10.57	□□□□□ -0.72
COPS7B-223	ENST00000611614	C8orf86	Q6ZUL3	223 aa		10.57	□□□□□ -0.72
COPS7B-223	ENST00000611614	NXT2	Q9NPJ8	142 aa	Known RBP	10.57	□□□□□ -0.72
COPS7B-223	ENST00000611614	AGPAT4-IT1	Q9H0P7	198 aa		10.56	□□□□□ -0.72
COPS7B-223	ENST00000611614	ZNF702P	Q9H963	129 aa		10.56	□□□□□ -0.72
COPS7B-223	ENST00000611614	TMEM89	A2RUT3	159 aa		10.56	□□□□□ -0.72

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