RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 LINC01545Q5VT33 79 aa12.31□□□□□ -0.44
TNXB-208ENST00000611016 STPG4Q8N801 248 aa12.31□□□□□ -0.44
TNXB-208ENST00000611016 ZNF491Q8N8L2 437 aa12.31□□□□□ -0.44
TNXB-208ENST00000611016 NDUFA12Q9UI09 145 aa12.31□□□□□ -0.44
TNXB-208ENST00000611016 UBL5Q9BZL1 73 aa12.31□□□□□ -0.44
TNXB-208ENST00000611016 TMEM126AQ9H061 195 aa12.31□□□□□ -0.44
TNXB-208ENST00000611016 CGB7P0DN87 165 aa12.3□□□□□ -0.44
TNXB-208ENST00000611016 PRSS57Q6UWY2 283 aa12.3□□□□□ -0.44
TNXB-208ENST00000611016 ZC2HC1AQ96GY0 325 aa12.3□□□□□ -0.44
TNXB-208ENST00000611016 NOP10Q9NPE3 64 aaKnown RBP12.3□□□□□ -0.44
TNXB-208ENST00000611016 A0A0J9YY99 117 aa12.3□□□□□ -0.44
TNXB-208ENST00000611016 SLURP1P55000 103 aa12.3□□□□□ -0.44
TNXB-208ENST00000611016 FOXE3Q13461 319 aa12.3□□□□□ -0.44
TNXB-208ENST00000611016 LHBP01229 141 aa12.29□□□□□ -0.44
TNXB-208ENST00000611016 HLA-DMBP28068 263 aa12.29□□□□□ -0.44
TNXB-208ENST00000611016 SPANXCQ9NY87 97 aa12.29□□□□□ -0.44
TNXB-208ENST00000611016 ANGP03950 147 aaKnown RBP12.29□□□□□ -0.44
TNXB-208ENST00000611016 SPINK8P0C7L1 97 aa12.29□□□□□ -0.44
TNXB-208ENST00000611016 ZGRF1Q86YA3 2104 aa12.29□□□□□ -0.44
TNXB-208ENST00000611016 C17orf77Q96MU5 243 aa12.29□□□□□ -0.44
TNXB-208ENST00000611016 C10orf105Q8TEF2 133 aa12.29□□□□□ -0.44
TNXB-208ENST00000611016 SIGLEC8Q9NYZ4 499 aa12.29□□□□□ -0.44
TNXB-208ENST00000611016 IGLC7A0M8Q6 106 aa12.29□□□□□ -0.44
TNXB-208ENST00000611016 GTF3C1Q12789 2109 aa12.28□□□□□ -0.44
TNXB-208ENST00000611016 CLPSL2Q6UWE3 100 aa12.28□□□□□ -0.44
TNXB-208ENST00000611016 NXPH4O95158 308 aa12.28□□□□□ -0.44
TNXB-208ENST00000611016 IGLC2P0DOY2 106 aa12.28□□□□□ -0.44
TNXB-208ENST00000611016 IGLC3P0DOY3 106 aa12.28□□□□□ -0.44
TNXB-208ENST00000611016 C9orf66Q5T8R8 295 aa12.28□□□□□ -0.44
TNXB-208ENST00000611016 ASPHD1Q5U4P2 390 aa12.28□□□□□ -0.44
TNXB-208ENST00000611016 ZFHX2Q9C0A1 2572 aaPredicted RBP12.28□□□□□ -0.44
TNXB-208ENST00000611016 A0A1W2PNU3 283 aaPredicted RBP12.28□□□□□ -0.44
TNXB-208ENST00000611016 BLCAPP62952 87 aa12.28□□□□□ -0.44
TNXB-208ENST00000611016 APRG1Q8IVJ8 170 aa12.28□□□□□ -0.44
TNXB-208ENST00000611016 A0A1B0GUS0 222 aa12.27□□□□□ -0.44
TNXB-208ENST00000611016 EDA2RQ9HAV5 297 aa12.27□□□□□ -0.44
TNXB-208ENST00000611016 KLF5Q13887 457 aaPredicted RBP12.27□□□□□ -0.44
TNXB-208ENST00000611016 PRO1854Q9UHT4 67 aa12.27□□□□□ -0.45
TNXB-208ENST00000611016 SH2D6Q7Z4S9 175 aa12.27□□□□□ -0.45
TNXB-208ENST00000611016 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.26□□□□□ -0.45
TNXB-208ENST00000611016 NPBQ8NG41 125 aa12.26□□□□□ -0.45
TNXB-208ENST00000611016 PCNX2A6NKB5 2137 aa12.26□□□□□ -0.45
TNXB-208ENST00000611016 HERV-K104P63124 156 aa12.26□□□□□ -0.45
TNXB-208ENST00000611016 FGF23Q9GZV9 251 aaPredicted RBP12.26□□□□□ -0.45
TNXB-208ENST00000611016 U3KQE9 123 aa12.26□□□□□ -0.45
TNXB-208ENST00000611016 K7EP34 96 aa12.25□□□□□ -0.45
TNXB-208ENST00000611016 GNRH2O43555 120 aa12.25□□□□□ -0.45
TNXB-208ENST00000611016 IGLV2-23P01705 113 aa12.25□□□□□ -0.45
TNXB-208ENST00000611016 CEND1Q8N111 149 aa12.25□□□□□ -0.45
TNXB-208ENST00000611016 DYNAPQ8N1N2 210 aa12.25□□□□□ -0.45
TNXB-208ENST00000611016 WIPF3A6NGB9 483 aa12.25□□□□□ -0.45
TNXB-208ENST00000611016 GP9P14770 177 aa12.25□□□□□ -0.45
TNXB-208ENST00000611016 IGHV7-81A0A0B4J1V7 117 aa12.25□□□□□ -0.45
TNXB-208ENST00000611016 J3QQQ9 107 aa12.25□□□□□ -0.45
TNXB-208ENST00000611016 NPYP01303 97 aa12.25□□□□□ -0.45
TNXB-208ENST00000611016 Q6ZSR3 168 aa12.25□□□□□ -0.45
TNXB-208ENST00000611016 RNF138Q8WVD3 245 aa12.24□□□□□ -0.45
TNXB-208ENST00000611016 KRTAP27-1Q3LI81 207 aa12.24□□□□□ -0.45
TNXB-208ENST00000611016 PRSS29PA6NIE9 313 aa12.24□□□□□ -0.45
TNXB-208ENST00000611016 IL15RAQ13261 267 aa12.24□□□□□ -0.45
TNXB-208ENST00000611016 RITA1Q96K30 269 aa12.24□□□□□ -0.45
TNXB-208ENST00000611016 DAZAP2Q15038 168 aaPredicted RBP12.24□□□□□ -0.45
TNXB-208ENST00000611016 KIF26AQ9ULI4 1882 aaPredicted RBP12.24□□□□□ -0.45
TNXB-208ENST00000611016 DSCR8Q96T75 97 aa12.24□□□□□ -0.45
TNXB-208ENST00000611016 IGKV1OR2-108A0A075B7D4 117 aa12.23□□□□□ -0.45
TNXB-208ENST00000611016 H3BQ85 93 aa12.23□□□□□ -0.45
TNXB-208ENST00000611016 RNASE13Q5GAN3 156 aaKnown RBP12.23□□□□□ -0.45
TNXB-208ENST00000611016 Q6ZWC4 215 aa12.23□□□□□ -0.45
TNXB-208ENST00000611016 PIFOQ8TCI5 191 aa12.23□□□□□ -0.45
TNXB-208ENST00000611016 AJUBAQ96IF1 538 aa12.23□□□□□ -0.45
TNXB-208ENST00000611016 MRPL35Q9NZE8 188 aaKnown RBP12.23□□□□□ -0.45
TNXB-208ENST00000611016 IGKV2D-24A0A075B6R9 120 aa12.23□□□□□ -0.45
TNXB-208ENST00000611016 LYPD6BQ8NI32 183 aa12.23□□□□□ -0.45
TNXB-208ENST00000611016 CITED1Q99966 193 aa12.23□□□□□ -0.45
TNXB-208ENST00000611016 PRSS47A8MTI9 375 aa12.23□□□□□ -0.45
TNXB-208ENST00000611016 SEM1Q6ZVN7 128 aa12.23□□□□□ -0.45
TNXB-208ENST00000611016 AGPAT4-IT1Q9H0P7 198 aa12.23□□□□□ -0.45
TNXB-208ENST00000611016 GTSF1LQ9H1H1 148 aa12.23□□□□□ -0.45
TNXB-208ENST00000611016 NOTCH3Q9UM47 2321 aa12.22□□□□□ -0.45
TNXB-208ENST00000611016 CRLF1O75462 422 aa12.22□□□□□ -0.45
TNXB-208ENST00000611016 FGF6P10767 208 aa12.22□□□□□ -0.45
TNXB-208ENST00000611016 SCRT2Q9NQ03 307 aa12.22□□□□□ -0.45
TNXB-208ENST00000611016 MALRD1Q5VYJ5 2156 aa12.22□□□□□ -0.45
TNXB-208ENST00000611016 Q6ZQT7 251 aa12.21□□□□□ -0.45
TNXB-208ENST00000611016 BVES-AS1Q5T3Y7 98 aa12.21□□□□□ -0.46
TNXB-208ENST00000611016 CFHR4Q92496 578 aa12.21□□□□□ -0.46
TNXB-208ENST00000611016 MUC6Q6W4X9 2439 aa12.21□□□□□ -0.46
TNXB-208ENST00000611016 Q9HAA7 133 aa12.2□□□□□ -0.46
TNXB-208ENST00000611016 TMEM89A2RUT3 159 aa12.2□□□□□ -0.46
TNXB-208ENST00000611016 IGHG4P01861 327 aa12.2□□□□□ -0.46
TNXB-208ENST00000611016 C9orf153Q5TBE3 101 aa12.2□□□□□ -0.46
TNXB-208ENST00000611016 SPRY4Q9C004 299 aa12.2□□□□□ -0.46
TNXB-208ENST00000611016 C16orf74Q96GX8 76 aa12.2□□□□□ -0.46
TNXB-208ENST00000611016 NPSP0C0P6 89 aa12.2□□□□□ -0.46
TNXB-208ENST00000611016 SLC25A29Q8N8R3 303 aa12.2□□□□□ -0.46
TNXB-208ENST00000611016 A0A1W2PPM0 123 aa12.19□□□□□ -0.46
TNXB-208ENST00000611016 IFITM1P13164 125 aa12.19□□□□□ -0.46
TNXB-208ENST00000611016 ZFP36P26651 326 aaKnown RBP12.19□□□□□ -0.46
TNXB-208ENST00000611016 DENND4CQ5VZ89 1909 aa12.19□□□□□ -0.46
TNXB-208ENST00000611016 IGLL1P15814 213 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms