RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 KLK9Q9UKQ9 250 aa12.02□□□□□ -0.48
CTSA-214ENST00000606788 TRAV12-2A0A075B6T6 113 aa12.02□□□□□ -0.49
CTSA-214ENST00000606788 SNAI2O43623 268 aa12.02□□□□□ -0.49
CTSA-214ENST00000606788 S100A4P26447 101 aaKnown RBP12.02□□□□□ -0.49
CTSA-214ENST00000606788 CFHR3Q02985 330 aa12.02□□□□□ -0.49
CTSA-214ENST00000606788 Q6AWC8 147 aa12.02□□□□□ -0.49
CTSA-214ENST00000606788 C2CD3Q4AC94 2353 aa12.02□□□□□ -0.49
CTSA-214ENST00000606788 PSMG4Q5JS54 123 aa12.02□□□□□ -0.49
CTSA-214ENST00000606788 Q6ZN92 141 aa12.02□□□□□ -0.49
CTSA-214ENST00000606788 SMPXQ9UHP9 88 aa12.02□□□□□ -0.49
CTSA-214ENST00000606788 IGLL1P15814 213 aa12.01□□□□□ -0.49
CTSA-214ENST00000606788 SYS1-DBNDD2H3BUS1 97 aa12.01□□□□□ -0.49
CTSA-214ENST00000606788 OR5AL1P0C617 328 aa12□□□□□ -0.49
CTSA-214ENST00000606788 HTN1P15515 57 aa12□□□□□ -0.49
CTSA-214ENST00000606788 RAB4AP20338 218 aa12□□□□□ -0.49
CTSA-214ENST00000606788 CTRLP40313 264 aa12□□□□□ -0.49
CTSA-214ENST00000606788 MIEN1Q9BRT3 115 aa12□□□□□ -0.49
CTSA-214ENST00000606788 A0A1W2PRX2 142 aa12□□□□□ -0.49
CTSA-214ENST00000606788 SLURP1P55000 103 aa12□□□□□ -0.49
CTSA-214ENST00000606788 HIVEP2P31629 2446 aa12□□□□□ -0.49
CTSA-214ENST00000606788 ANXA2RQ3ZCQ2 193 aa12□□□□□ -0.49
CTSA-214ENST00000606788 LINC01559Q495D7 138 aa12□□□□□ -0.49
CTSA-214ENST00000606788 C9orf47Q6ZRZ4 202 aa12□□□□□ -0.49
CTSA-214ENST00000606788 CHCHD1Q96BP2 118 aaKnown RBP12□□□□□ -0.49
CTSA-214ENST00000606788 RNF185Q96GF1 192 aa12□□□□□ -0.49
CTSA-214ENST00000606788 ZNF702PQ9H963 129 aa12□□□□□ -0.49
CTSA-214ENST00000606788 SOCS3O14543 225 aa11.99□□□□□ -0.49
CTSA-214ENST00000606788 RPS20P60866 119 aaKnown RBP11.99□□□□□ -0.49
CTSA-214ENST00000606788 ZFAND2AQ8N6M9 145 aa11.99□□□□□ -0.49
CTSA-214ENST00000606788 Q6YL49 198 aa11.99□□□□□ -0.49
CTSA-214ENST00000606788 TRAV12-3A0A0B4J271 114 aa11.98□□□□□ -0.49
CTSA-214ENST00000606788 RBAKDNA6NC62 111 aa11.98□□□□□ -0.49
CTSA-214ENST00000606788 G0S2P27469 103 aa11.98□□□□□ -0.49
CTSA-214ENST00000606788 HOXD3P31249 432 aaPredicted RBP11.98□□□□□ -0.49
CTSA-214ENST00000606788 ZNF493Q6ZR52 646 aa11.98□□□□□ -0.49
CTSA-214ENST00000606788 C20orf144Q9BQM9 153 aa11.98□□□□□ -0.49
CTSA-214ENST00000606788 MAP1LC3CQ9BXW4 147 aa11.98□□□□□ -0.49
CTSA-214ENST00000606788 PDZD2O15018 2839 aa11.97□□□□□ -0.49
CTSA-214ENST00000606788 A0A096LNJ9 63 aa11.97□□□□□ -0.49
CTSA-214ENST00000606788 H3BUA1 57 aa11.97□□□□□ -0.49
CTSA-214ENST00000606788 ZNF124Q15973 351 aa11.97□□□□□ -0.49
CTSA-214ENST00000606788 MS4A6AQ9H2W1 248 aa11.97□□□□□ -0.49
CTSA-214ENST00000606788 NACAE9PAV3 2078 aa11.97□□□□□ -0.49
CTSA-214ENST00000606788 M0R143 59 aa11.97□□□□□ -0.49
CTSA-214ENST00000606788 IGLC3P0DOY3 106 aa11.97□□□□□ -0.49
CTSA-214ENST00000606788 KRTAP1-3Q8IUG1 177 aa11.97□□□□□ -0.49
CTSA-214ENST00000606788 PPP1R14DQ9NXH3 145 aa11.97□□□□□ -0.49
CTSA-214ENST00000606788 SETXQ7Z333 2677 aaKnown RBP11.97□□□□□ -0.49
CTSA-214ENST00000606788 MGPP08493 103 aa11.97□□□□□ -0.49
CTSA-214ENST00000606788 C14orf178Q8N769 122 aaPredicted RBP11.97□□□□□ -0.49
CTSA-214ENST00000606788 AKAP9Q99996 3911 aa11.96□□□□□ -0.49
CTSA-214ENST00000606788 J3QLI3 93 aa11.96□□□□□ -0.49
CTSA-214ENST00000606788 HINT1P49773 126 aaPredicted RBP11.96□□□□□ -0.49
CTSA-214ENST00000606788 COX8CQ7Z4L0 72 aa11.96□□□□□ -0.49
CTSA-214ENST00000606788 A0A1B0GW15 77 aa11.96□□□□□ -0.5
CTSA-214ENST00000606788 TCAPO15273 167 aa11.96□□□□□ -0.5
CTSA-214ENST00000606788 TNFRSF6BO95407 300 aa11.96□□□□□ -0.5
CTSA-214ENST00000606788 PRM2P04554 102 aa11.96□□□□□ -0.5
CTSA-214ENST00000606788 HNRNPA3P51991 378 aaKnown RBP11.96□□□□□ -0.5
CTSA-214ENST00000606788 Q6ZVH6 145 aa11.96□□□□□ -0.5
CTSA-214ENST00000606788 TMEM191AQ9H0A3 160 aa11.96□□□□□ -0.5
CTSA-214ENST00000606788 JPT2Q9H910 190 aa11.96□□□□□ -0.5
CTSA-214ENST00000606788 FBLL1A6NHQ2 334 aaKnown RBP11.95□□□□□ -0.5
CTSA-214ENST00000606788 CYB5R2Q6BCY4 276 aa11.95□□□□□ -0.5
CTSA-214ENST00000606788 TRAV9-2A0A087WT02 112 aa11.95□□□□□ -0.5
CTSA-214ENST00000606788 C21orf62-AS1Q17RA5 79 aa11.95□□□□□ -0.5
CTSA-214ENST00000606788 KLHDC1Q8N7A1 406 aa11.95□□□□□ -0.5
CTSA-214ENST00000606788 PSMG3-AS1Q96PY0 264 aa11.95□□□□□ -0.5
CTSA-214ENST00000606788 MUC4Q99102 2169 aa11.95□□□□□ -0.5
CTSA-214ENST00000606788 ZNF747Q9BV97 191 aa11.95□□□□□ -0.5
CTSA-214ENST00000606788 PHLDA3Q9Y5J5 127 aa11.95□□□□□ -0.5
CTSA-214ENST00000606788 CACNG7P62955 275 aa11.94□□□□□ -0.5
CTSA-214ENST00000606788 SPINK13Q1W4C9 94 aa11.94□□□□□ -0.5
CTSA-214ENST00000606788 OVOL1O14753 267 aa11.94□□□□□ -0.5
CTSA-214ENST00000606788 NEGR1Q7Z3B1 354 aa11.94□□□□□ -0.5
CTSA-214ENST00000606788 ARL6IP6Q8N6S5 226 aa11.94□□□□□ -0.5
CTSA-214ENST00000606788 DCANP1Q8TF63 244 aa11.94□□□□□ -0.5
CTSA-214ENST00000606788 LINC00477Q96M19 166 aa11.94□□□□□ -0.5
CTSA-214ENST00000606788 TCF21O43680 179 aa11.93□□□□□ -0.5
CTSA-214ENST00000606788 LEPP41159 167 aa11.93□□□□□ -0.5
CTSA-214ENST00000606788 HSPB8Q9UJY1 196 aa11.93□□□□□ -0.5
CTSA-214ENST00000606788 ERASQ7Z444 233 aa11.93□□□□□ -0.5
CTSA-214ENST00000606788 STPG4Q8N801 248 aa11.93□□□□□ -0.5
CTSA-214ENST00000606788 OR11H1Q8NG94 326 aa11.93□□□□□ -0.5
CTSA-214ENST00000606788 TRAV21A0A0B4J279 112 aa11.92□□□□□ -0.5
CTSA-214ENST00000606788 SRSF2Q01130 221 aaKnown RBP11.92□□□□□ -0.5
CTSA-214ENST00000606788 MRPL53Q96EL3 112 aaKnown RBP11.92□□□□□ -0.5
CTSA-214ENST00000606788 MAP1LC3AQ9H492 121 aa11.92□□□□□ -0.5
CTSA-214ENST00000606788 UQCR10Q9UDW1 63 aa11.92□□□□□ -0.5
CTSA-214ENST00000606788 SMIM15Q7Z3B0 74 aa11.92□□□□□ -0.5
CTSA-214ENST00000606788 RPL39LQ96EH5 51 aaKnown RBP11.92□□□□□ -0.5
CTSA-214ENST00000606788 C20orf202A1L168 122 aa11.92□□□□□ -0.5
CTSA-214ENST00000606788 KNCNA6PVL3 124 aa11.92□□□□□ -0.5
CTSA-214ENST00000606788 CD7P09564 240 aa11.92□□□□□ -0.5
CTSA-214ENST00000606788 TCTEX1D4Q5JR98 221 aa11.92□□□□□ -0.5
CTSA-214ENST00000606788 A0A087WWL8 130 aa11.91□□□□□ -0.5
CTSA-214ENST00000606788 LGALS1P09382 135 aaKnown RBP11.91□□□□□ -0.5
CTSA-214ENST00000606788 SMR3AQ99954 134 aa11.91□□□□□ -0.5
CTSA-214ENST00000606788 FLNBO75369 2602 aaKnown RBP11.91□□□□□ -0.5
CTSA-214ENST00000606788 FSHBP01225 129 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms