RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 XCL2Q9UBD3 114 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 PAIP2BQ9ULR5 123 aaKnown RBP2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 APLNQ9ULZ1 77 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 HIGD1AQ9Y241 93 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 RFNGQ9Y644 331 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 MUC4Q99102 2169 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 DEFB131BA0A096LNP1 70 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 SMCO3A2RU48 225 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 RNF222A6NCQ9 220 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 F6UB75 175 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 F8WDY8 70 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 PANO1I0J062 215 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 L7N2F9 121 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 GOSR2O14653 212 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 DEFB4AO15263 64 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 CRXO43186 299 aaPredicted RBP2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 OR5G3P0C626 314 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 SPART-AS1P0CW21 52 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 IGLC2P0DOY2 106 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 CXCL3P19876 107 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 PVALBP20472 110 aaPredicted RBP2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 CAMLGP49069 296 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 SULT1A1P50225 295 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 DEFB1P60022 68 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 RRAS2P62070 204 aaPredicted RBP2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 HBG1P69891 147 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 HBG2P69892 147 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 SLC38A11Q08AI6 406 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 RAB31Q13636 194 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 PSG3Q16557 428 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 GUK1Q16774 197 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 RRN3P1Q2M238 152 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 LCN15Q6UWW0 184 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 LINC00305Q7Z4B0 112 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 BPIFA4PQ86YQ2 179 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 TMEM256Q8N2U0 113 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 TMEM252Q8N6L7 170 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 OR11H7Q8NGC8 314 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 OR4B1Q8NGF8 309 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 OR8A1Q8NGG7 326 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 OR1L4Q8NGR5 311 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 PFDN5Q99471 154 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 MGST2Q99735 147 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 C20orf144Q9BQM9 153 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 SEC22CQ9BRL7 303 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 SLC50A1Q9BRV3 221 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 MARVELD1Q9BSK0 173 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 NMES1Q9C002 83 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 ARL6Q9H0F7 186 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 SLC35B3Q9H1N7 401 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 ZNF331Q9NQX6 463 aaPredicted RBP2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 BATF3Q9NR55 127 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 UQCC1Q9NVA1 299 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 GOLT1BQ9Y3E0 138 aa2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 LSM5Q9Y4Y9 91 aaKnown RBP2.36□□□□□ -2.03
CKS1BP3-201ENST00000600888 ALMS1Q8TCU4 4167 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 FAM24AA6NFZ4 105 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 LYRM9A8MSI8 78 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 IGLL5B9A064 214 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 INMT-MINDY4F8WBC2 141 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 BOLA2-SMG1P6H3BVE0 249 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 RTL8CO15255 209 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 COX7A2P2O60397 106 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 CST7O76096 145 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 INSP01308 110 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 HBE1P02100 147 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 RLN2P04090 185 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 P0DMU3 169 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 FAM231AP0DMU4 169 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 FAM231CP0DMU5 169 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 CDKN1BP46527 198 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 BCAP31P51572 246 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 CAV2P51636 162 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 IFITM3Q01628 133 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 BAXQ07812 192 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 PDE6HQ13956 83 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 FAM222AQ5U5X8 452 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 C10orf113Q5VZT2 155 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 ZNF493Q6ZR52 646 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 STX12Q86Y82 276 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 RNF182Q8N6D2 247 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 ZNF738Q8NE65 137 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 ENKURQ8TC29 256 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 RPUSD4Q96CM3 377 aaKnown RBP2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 ODF3Q96PU9 254 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 NIPSNAP3BQ9BS92 247 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 SLC25A31Q9H0C2 315 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 SLC39A9Q9NUM3 307 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 TMEM14CQ9P0S9 112 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 PRELID1Q9Y255 219 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 YTHDF2Q9Y5A9 579 aaKnown RBP2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 PXMP4Q9Y6I8 212 aa2.35□□□□□ -2.03
CKS1BP3-201ENST00000600888 KMT2AQ03164 3969 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 TRBV19A0A075B6N1 114 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 IGSF23A1L1A6 192 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 PLAC8L1A1L4L8 177 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 FAM25EA8MYX2 175 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 H3BQ15 152 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 H7BYZ3 331 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 M0R2Z0 102 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms