RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 S100A2P29034 98 aa7.02□□□□□ -1.29
VPS25-205ENST00000590339 SRIP30626 198 aa7.02□□□□□ -1.29
VPS25-205ENST00000590339 CAMPP49913 170 aa7.02□□□□□ -1.29
VPS25-205ENST00000590339 DEFB1P60022 68 aa7.02□□□□□ -1.29
VPS25-205ENST00000590339 RPL11P62913 178 aaKnown RBP7.02□□□□□ -1.29
VPS25-205ENST00000590339 KIAA1644Q3SXP7 199 aa7.02□□□□□ -1.29
VPS25-205ENST00000590339 PDZD11Q5EBL8 140 aa7.02□□□□□ -1.29
VPS25-205ENST00000590339 ZNF493Q6ZR52 646 aa7.02□□□□□ -1.29
VPS25-205ENST00000590339 TMEM256Q8N2U0 113 aa7.02□□□□□ -1.29
VPS25-205ENST00000590339 FER1L6-AS1Q8NA97 138 aa7.02□□□□□ -1.29
VPS25-205ENST00000590339 OR9G4Q8NGQ1 327 aa7.02□□□□□ -1.29
VPS25-205ENST00000590339 DPF1Q92782 380 aa7.02□□□□□ -1.29
VPS25-205ENST00000590339 RAX2Q96IS3 184 aa7.02□□□□□ -1.29
VPS25-205ENST00000590339 ALKBH7Q9BT30 221 aaPredicted RBP7.02□□□□□ -1.29
VPS25-205ENST00000590339 SSBP4Q9BWG4 385 aaPredicted RBP7.02□□□□□ -1.29
VPS25-205ENST00000590339 PEMTQ9UBM1 199 aa7.02□□□□□ -1.29
VPS25-205ENST00000590339 TMSB15BA0A087X1C1 80 aa7.01□□□□□ -1.29
VPS25-205ENST00000590339 A0A0J9YX75 114 aa7.01□□□□□ -1.29
VPS25-205ENST00000590339 KLLNB2CW77 178 aa7.01□□□□□ -1.29
VPS25-205ENST00000590339 F6UB75 175 aa7.01□□□□□ -1.29
VPS25-205ENST00000590339 SERF1AO75920 110 aa7.01□□□□□ -1.29
VPS25-205ENST00000590339 CSN3P07498 182 aa7.01□□□□□ -1.29
VPS25-205ENST00000590339 FABP4P15090 132 aa7.01□□□□□ -1.29
VPS25-205ENST00000590339 LYZL1Q6UWQ5 148 aa7.01□□□□□ -1.29
VPS25-205ENST00000590339 WFDC9Q8NEX5 89 aa7.01□□□□□ -1.29
VPS25-205ENST00000590339 OR10D4PQ8NGN7 298 aa7.01□□□□□ -1.29
VPS25-205ENST00000590339 C18orf32Q8TCD1 76 aa7.01□□□□□ -1.29
VPS25-205ENST00000590339 DLX4Q92988 240 aaPredicted RBP7.01□□□□□ -1.29
VPS25-205ENST00000590339 PACRGQ96M98 296 aaPredicted RBP7.01□□□□□ -1.29
VPS25-205ENST00000590339 DUX3Q96PT4 197 aa7.01□□□□□ -1.29
VPS25-205ENST00000590339 SELENOKQ9Y6D0 94 aa7.01□□□□□ -1.29
VPS25-205ENST00000590339 LOC102724200A0A096LPH7 203 aaPredicted RBP7□□□□□ -1.29
VPS25-205ENST00000590339 TRAV21A0A0B4J279 112 aa7□□□□□ -1.29
VPS25-205ENST00000590339 A8MTW9 85 aa7□□□□□ -1.29
VPS25-205ENST00000590339 SNAI2O43623 268 aa7□□□□□ -1.29
VPS25-205ENST00000590339 NUPR1O60356 82 aa7□□□□□ -1.29
VPS25-205ENST00000590339 ORM1P02763 201 aa7□□□□□ -1.29
VPS25-205ENST00000590339 ZNF688P0C7X2 276 aa7□□□□□ -1.29
VPS25-205ENST00000590339 SNRPD3P62318 126 aaKnown RBP7□□□□□ -1.29
VPS25-205ENST00000590339 DNLZQ5SXM8 178 aa7□□□□□ -1.29
VPS25-205ENST00000590339 DMRTA1Q5VZB9 504 aa7□□□□□ -1.29
VPS25-205ENST00000590339 MRAPQ8TCY5 172 aa7□□□□□ -1.29
VPS25-205ENST00000590339 BORCS7Q96B45 105 aa7□□□□□ -1.29
VPS25-205ENST00000590339 KCNS1Q96KK3 526 aa7□□□□□ -1.29
VPS25-205ENST00000590339 C12orf57Q99622 126 aa7□□□□□ -1.29
VPS25-205ENST00000590339 CMYA5Q8N3K9 4069 aa7□□□□□ -1.29
VPS25-205ENST00000590339 OR5AL1P0C617 328 aa6.99□□□□□ -1.29
VPS25-205ENST00000590339 MED14OSP0DP75 135 aa6.99□□□□□ -1.29
VPS25-205ENST00000590339 PYY3Q5JQD4 70 aa6.99□□□□□ -1.29
VPS25-205ENST00000590339 PSMG4Q5JS54 123 aa6.99□□□□□ -1.29
VPS25-205ENST00000590339 KPRPQ5T749 579 aaPredicted RBP6.99□□□□□ -1.29
VPS25-205ENST00000590339 FOXI2Q6ZQN5 318 aa6.99□□□□□ -1.29
VPS25-205ENST00000590339 Q6ZQT7 251 aa6.99□□□□□ -1.29
VPS25-205ENST00000590339 WFDC3Q8IUB2 231 aa6.99□□□□□ -1.29
VPS25-205ENST00000590339 TMEM18Q96B42 140 aa6.99□□□□□ -1.29
VPS25-205ENST00000590339 RCHY1Q96PM5 261 aa6.99□□□□□ -1.29
VPS25-205ENST00000590339 SIGLEC8Q9NYZ4 499 aa6.99□□□□□ -1.29
VPS25-205ENST00000590339 VWFP04275 2813 aa6.99□□□□□ -1.29
VPS25-205ENST00000590339 IGHV4-4A0A075B6R2 117 aa6.98□□□□□ -1.29
VPS25-205ENST00000590339 CCL24O00175 119 aa6.98□□□□□ -1.29
VPS25-205ENST00000590339 DUSP14O95147 198 aaKnown RBP6.98□□□□□ -1.29
VPS25-205ENST00000590339 LEPP41159 167 aa6.98□□□□□ -1.29
VPS25-205ENST00000590339 TFPI2P48307 235 aa6.98□□□□□ -1.29
VPS25-205ENST00000590339 IQCJQ1A5X6 159 aa6.98□□□□□ -1.29
VPS25-205ENST00000590339 DEFB121Q5J5C9 76 aa6.98□□□□□ -1.29
VPS25-205ENST00000590339 BAGE3Q86Y29 109 aa6.98□□□□□ -1.29
VPS25-205ENST00000590339 TMEM61Q8N0U2 210 aa6.98□□□□□ -1.29
VPS25-205ENST00000590339 LINC00482Q8N8I6 264 aa6.98□□□□□ -1.29
VPS25-205ENST00000590339 TPPP3Q9BW30 176 aa6.98□□□□□ -1.29
VPS25-205ENST00000590339 U3KQK5 164 aa6.98□□□□□ -1.29
VPS25-205ENST00000590339 TRAV25A0A0B4J276 109 aa6.97□□□□□ -1.29
VPS25-205ENST00000590339 GPX1P07203 203 aa6.97□□□□□ -1.29
VPS25-205ENST00000590339 PAFAH1B2P68402 229 aa6.97□□□□□ -1.29
VPS25-205ENST00000590339 KIR3DS1Q14943 382 aa6.97□□□□□ -1.29
VPS25-205ENST00000590339 DEFB114Q30KQ6 69 aa6.97□□□□□ -1.29
VPS25-205ENST00000590339 FAM104BQ5XKR9 115 aa6.97□□□□□ -1.29
VPS25-205ENST00000590339 AMTNQ6UX39 209 aa6.97□□□□□ -1.29
VPS25-205ENST00000590339 DYNLRB2Q8TF09 96 aa6.97□□□□□ -1.29
VPS25-205ENST00000590339 URB1-AS1Q96HZ7 61 aa6.97□□□□□ -1.29
VPS25-205ENST00000590339 TMEM191AQ9H0A3 160 aa6.97□□□□□ -1.29
VPS25-205ENST00000590339 NOTCH1P46531 2555 aa6.96□□□□□ -1.29
VPS25-205ENST00000590339 C7orf71A4D174 169 aa6.96□□□□□ -1.3
VPS25-205ENST00000590339 ZNF324O75467 553 aaPredicted RBP6.96□□□□□ -1.3
VPS25-205ENST00000590339 NXPH4O95158 308 aa6.96□□□□□ -1.3
VPS25-205ENST00000590339 HLA-DRB4P13762 266 aa6.96□□□□□ -1.3
VPS25-205ENST00000590339 KRTAP10-11P60412 298 aa6.96□□□□□ -1.3
VPS25-205ENST00000590339 CACNG7P62955 275 aa6.96□□□□□ -1.3
VPS25-205ENST00000590339 JOSD1Q15040 202 aaPredicted RBP6.96□□□□□ -1.3
VPS25-205ENST00000590339 EBLN2Q6P2I7 272 aa6.96□□□□□ -1.3
VPS25-205ENST00000590339 OR10AG1Q8NH19 301 aa6.96□□□□□ -1.3
VPS25-205ENST00000590339 SPAG8Q99932 426 aaPredicted RBP6.96□□□□□ -1.3
VPS25-205ENST00000590339 MAP6D1Q9H9H5 199 aa6.96□□□□□ -1.3
VPS25-205ENST00000590339 SCRT2Q9NQ03 307 aa6.96□□□□□ -1.3
VPS25-205ENST00000590339 HLA-DRB4X5D2U9 266 aa6.96□□□□□ -1.3
VPS25-205ENST00000590339 J3KRW8 73 aa6.95□□□□□ -1.3
VPS25-205ENST00000590339 NTF3P20783 257 aa6.95□□□□□ -1.3
VPS25-205ENST00000590339 RNASE4P34096 147 aaKnown RBP6.95□□□□□ -1.3
VPS25-205ENST00000590339 ASIPP42127 132 aa6.95□□□□□ -1.3
VPS25-205ENST00000590339 TDRG1Q3Y452 100 aa6.95□□□□□ -1.3
VPS25-205ENST00000590339 ANXA2RQ3ZCQ2 193 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms