RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 PTPRBP23467 1997 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 BPTFQ12830 3046 aa4.62□□□□□ -1.67
SMAD4-203ENST00000585448 C17orf98A8MV24 154 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 TEX22C9J3V5 150 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 INAFM1C9JVW0 142 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 H0YGG7 62 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 SCRG1O75711 98 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 IGHG2P01859 326 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 TCRAP04437 139 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 INAFM2P0DMQ5 153 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 COX6B1P14854 86 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 NNATQ16517 81 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 C10orf113Q5VZT2 155 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 Q6JHZ5 121 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 GUSBP11Q6P575 273 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 MRPL55Q7Z7F7 128 aaKnown RBP4.61□□□□□ -1.67
SMAD4-203ENST00000585448 Q86TA4 180 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 WFDC11Q8NEX6 87 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 UBALD1Q8TB05 177 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 ZNF524Q96C55 264 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 EMC6Q9BV81 110 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 GNG12Q9UBI6 72 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 SLC25A15Q9Y619 301 aa4.61□□□□□ -1.67
SMAD4-203ENST00000585448 MPDZO75970 2070 aa4.6□□□□□ -1.67
SMAD4-203ENST00000585448 A0A0U1RQV1 116 aa4.6□□□□□ -1.67
SMAD4-203ENST00000585448 LMO7DNF2Z398 122 aa4.6□□□□□ -1.67
SMAD4-203ENST00000585448 NDUFA3O95167 84 aa4.6□□□□□ -1.67
SMAD4-203ENST00000585448 IGHV4-39P01824 125 aa4.6□□□□□ -1.67
SMAD4-203ENST00000585448 CLPSP04118 112 aa4.6□□□□□ -1.67
SMAD4-203ENST00000585448 ZNF22P17026 224 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-203ENST00000585448 SUB1P53999 127 aaKnown RBP eCLIP4.6□□□□□ -1.67
SMAD4-203ENST00000585448 LAGE3Q14657 143 aa4.6□□□□□ -1.67
SMAD4-203ENST00000585448 Q1RN00 199 aa4.6□□□□□ -1.67
SMAD4-203ENST00000585448 SPINK9Q5DT21 86 aa4.6□□□□□ -1.67
SMAD4-203ENST00000585448 VSIG2Q96IQ7 327 aa4.6□□□□□ -1.67
SMAD4-203ENST00000585448 S1PR3Q99500 378 aa4.6□□□□□ -1.67
SMAD4-203ENST00000585448 ADAMTS9Q9P2N4 1935 aa4.6□□□□□ -1.67
SMAD4-203ENST00000585448 TCF20Q9UGU0 1960 aaKnown RBP4.6□□□□□ -1.67
SMAD4-203ENST00000585448 SCN10AQ9Y5Y9 1956 aa4.6□□□□□ -1.67
SMAD4-203ENST00000585448 FREM3P0C091 2139 aa4.6□□□□□ -1.67
SMAD4-203ENST00000585448 TRBV7-6A0A0J9YX20 115 aa4.59□□□□□ -1.67
SMAD4-203ENST00000585448 LST1O00453 97 aa4.59□□□□□ -1.67
SMAD4-203ENST00000585448 NDUFC1O43677 76 aa4.59□□□□□ -1.67
SMAD4-203ENST00000585448 SPTBP11277 2137 aa4.59□□□□□ -1.67
SMAD4-203ENST00000585448 HILS1P60008 231 aa4.59□□□□□ -1.67
SMAD4-203ENST00000585448 ERCC8Q13216 396 aa4.59□□□□□ -1.67
SMAD4-203ENST00000585448 C2orf83Q53S99 150 aa4.59□□□□□ -1.67
SMAD4-203ENST00000585448 FAM27BQ5VT28 67 aa4.59□□□□□ -1.67
SMAD4-203ENST00000585448 C9orf139Q6ZV77 190 aa4.59□□□□□ -1.67
SMAD4-203ENST00000585448 TMEM75Q8N9X5 138 aa4.59□□□□□ -1.67
SMAD4-203ENST00000585448 PHPT1Q9NRX4 125 aaPredicted RBP4.59□□□□□ -1.67
SMAD4-203ENST00000585448 SHANK1Q9Y566 2161 aa4.58□□□□□ -1.68
SMAD4-203ENST00000585448 TRBV19A0A075B6N1 114 aa4.58□□□□□ -1.68
SMAD4-203ENST00000585448 IGHV4-28A0A0C4DH34 117 aa4.58□□□□□ -1.68
SMAD4-203ENST00000585448 TMEM223A0PJW6 202 aa4.58□□□□□ -1.68
SMAD4-203ENST00000585448 PLAC8L1A1L4L8 177 aa4.58□□□□□ -1.68
SMAD4-203ENST00000585448 RBMY1BA6NDE4 496 aaKnown RBP4.58□□□□□ -1.68
SMAD4-203ENST00000585448 RBMY1EA6NEQ0 496 aaKnown RBP4.58□□□□□ -1.68
SMAD4-203ENST00000585448 WNT9BO14905 357 aa4.58□□□□□ -1.68
SMAD4-203ENST00000585448 RBMY1DP0C7P1 496 aaKnown RBP4.58□□□□□ -1.68
SMAD4-203ENST00000585448 RBMY1A1P0DJD3 496 aaKnown RBP4.58□□□□□ -1.68
SMAD4-203ENST00000585448 RBMY1CP0DJD4 496 aa4.58□□□□□ -1.68
SMAD4-203ENST00000585448 BRWD1-AS2P59051 145 aa4.58□□□□□ -1.68
SMAD4-203ENST00000585448 RBMY1FQ15415 496 aaKnown RBP4.58□□□□□ -1.68
SMAD4-203ENST00000585448 ORMDL2Q53FV1 153 aa4.58□□□□□ -1.68
SMAD4-203ENST00000585448 LINC00305Q7Z4B0 112 aa4.58□□□□□ -1.68
SMAD4-203ENST00000585448 Q8IYB0 196 aa4.58□□□□□ -1.68
SMAD4-203ENST00000585448 NFAM1Q8NET5 270 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-203ENST00000585448 NUP37Q8NFH4 326 aa4.58□□□□□ -1.68
SMAD4-203ENST00000585448 DCANP1Q8TF63 244 aa4.58□□□□□ -1.68
SMAD4-203ENST00000585448 CYSTM1Q9H1C7 97 aa4.58□□□□□ -1.68
SMAD4-203ENST00000585448 IGKV2D-30A0A075B6S6 120 aa4.57□□□□□ -1.68
SMAD4-203ENST00000585448 TMEM30CPA0ZSE6 113 aa4.57□□□□□ -1.68
SMAD4-203ENST00000585448 LILRA5A6NI73 299 aa4.57□□□□□ -1.68
SMAD4-203ENST00000585448 USP17L23D6RBM5 183 aa4.57□□□□□ -1.68
SMAD4-203ENST00000585448 FXYD7P58549 80 aa4.57□□□□□ -1.68
SMAD4-203ENST00000585448 PLGLAQ15195 96 aa4.57□□□□□ -1.68
SMAD4-203ENST00000585448 FAM222AQ5U5X8 452 aa4.57□□□□□ -1.68
SMAD4-203ENST00000585448 LYZL1Q6UWQ5 148 aa4.57□□□□□ -1.68
SMAD4-203ENST00000585448 IGFL2Q6UWQ7 119 aa4.57□□□□□ -1.68
SMAD4-203ENST00000585448 FP248Q71RG6 208 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-203ENST00000585448 CD177Q8N6Q3 437 aa4.57□□□□□ -1.68
SMAD4-203ENST00000585448 FLVCR1-AS1Q8TAF5 88 aa4.57□□□□□ -1.68
SMAD4-203ENST00000585448 SMCR5Q8TEV8 140 aa4.57□□□□□ -1.68
SMAD4-203ENST00000585448 SLC50A1Q9BRV3 221 aa4.57□□□□□ -1.68
SMAD4-203ENST00000585448 TIMM21Q9BVV7 248 aa4.57□□□□□ -1.68
SMAD4-203ENST00000585448 DAZ1Q9NQZ3 744 aaKnown RBP4.57□□□□□ -1.68
SMAD4-203ENST00000585448 ICOSQ9Y6W8 199 aa4.57□□□□□ -1.68
SMAD4-203ENST00000585448 CACNA1CQ13936 2221 aa4.57□□□□□ -1.68
SMAD4-203ENST00000585448 COL5A1P20908 1838 aaPredicted RBP4.56□□□□□ -1.68
SMAD4-203ENST00000585448 IGLV2-18A0A075B6J9 118 aa4.56□□□□□ -1.68
SMAD4-203ENST00000585448 A0A0J9YX75 114 aa4.56□□□□□ -1.68
SMAD4-203ENST00000585448 IQCF6A8MYZ5 107 aa4.56□□□□□ -1.68
SMAD4-203ENST00000585448 SS18L1O75177 396 aaPredicted RBP4.56□□□□□ -1.68
SMAD4-203ENST00000585448 IGHV3-13P01766 116 aa4.56□□□□□ -1.68
SMAD4-203ENST00000585448 RHOHQ15669 191 aa4.56□□□□□ -1.68
SMAD4-203ENST00000585448 S100A7L2Q5SY68 101 aa4.56□□□□□ -1.68
SMAD4-203ENST00000585448 SERTAD4-AS1Q5TG53 156 aa4.56□□□□□ -1.68
SMAD4-203ENST00000585448 ATP5EP2Q5VTU8 51 aa4.56□□□□□ -1.68
SMAD4-203ENST00000585448 COX8CQ7Z4L0 72 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms