RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 TMEM8BA6NDV4 472 aa11.92□□□□□ -0.5
TVP23C-210ENST00000584811 CFHR3Q02985 330 aa11.92□□□□□ -0.5
TVP23C-210ENST00000584811 ZFAND2AQ8N6M9 145 aa11.92□□□□□ -0.5
TVP23C-210ENST00000584811 LINC01545Q5VT33 79 aa11.92□□□□□ -0.5
TVP23C-210ENST00000584811 USMG5Q96IX5 58 aa11.91□□□□□ -0.5
TVP23C-210ENST00000584811 TMEM208Q9BTX3 173 aa11.91□□□□□ -0.5
TVP23C-210ENST00000584811 M0QZK8 103 aa11.91□□□□□ -0.5
TVP23C-210ENST00000584811 TNFRSF6BO95407 300 aa11.91□□□□□ -0.5
TVP23C-210ENST00000584811 PET117Q6UWS5 81 aa11.91□□□□□ -0.5
TVP23C-210ENST00000584811 C9orf139Q6ZV77 190 aa11.91□□□□□ -0.5
TVP23C-210ENST00000584811 ZNF843Q8N446 348 aa11.91□□□□□ -0.5
TVP23C-210ENST00000584811 ACANP16112 2415 aa11.91□□□□□ -0.5
TVP23C-210ENST00000584811 CACNG7P62955 275 aa11.91□□□□□ -0.5
TVP23C-210ENST00000584811 ERASQ7Z444 233 aa11.91□□□□□ -0.5
TVP23C-210ENST00000584811 C20orf202A1L168 122 aa11.9□□□□□ -0.5
TVP23C-210ENST00000584811 TCF21O43680 179 aa11.9□□□□□ -0.5
TVP23C-210ENST00000584811 NPSP0C0P6 89 aa11.9□□□□□ -0.5
TVP23C-210ENST00000584811 RNASE4P34096 147 aaKnown RBP11.9□□□□□ -0.5
TVP23C-210ENST00000584811 DMRTA1Q5VZB9 504 aa11.9□□□□□ -0.5
TVP23C-210ENST00000584811 LINC01356Q8N9X3 169 aa11.9□□□□□ -0.5
TVP23C-210ENST00000584811 M0R381 172 aa11.89□□□□□ -0.51
TVP23C-210ENST00000584811 GNRH2O43555 120 aa11.89□□□□□ -0.51
TVP23C-210ENST00000584811 MPV17L2Q567V2 206 aa11.89□□□□□ -0.51
TVP23C-210ENST00000584811 SPANXN1Q5VSR9 72 aa11.89□□□□□ -0.51
TVP23C-210ENST00000584811 DEFB104AQ8WTQ1 72 aa11.89□□□□□ -0.51
TVP23C-210ENST00000584811 DAZ1Q9NQZ3 744 aaKnown RBP11.89□□□□□ -0.51
TVP23C-210ENST00000584811 BEX4Q9NWD9 120 aaPredicted RBP11.89□□□□□ -0.51
TVP23C-210ENST00000584811 COX6B1P14854 86 aa11.89□□□□□ -0.51
TVP23C-210ENST00000584811 SRSF2Q01130 221 aaKnown RBP11.89□□□□□ -0.51
TVP23C-210ENST00000584811 MRPL53Q96EL3 112 aaKnown RBP11.89□□□□□ -0.51
TVP23C-210ENST00000584811 FLNAP21333 2647 aaKnown RBP11.89□□□□□ -0.51
TVP23C-210ENST00000584811 PSMB8P28062 276 aa11.88□□□□□ -0.51
TVP23C-210ENST00000584811 DKK2Q9UBU2 259 aa11.88□□□□□ -0.51
TVP23C-210ENST00000584811 HBDP02042 147 aa11.88□□□□□ -0.51
TVP23C-210ENST00000584811 ANKRD39Q53RE8 183 aa11.88□□□□□ -0.51
TVP23C-210ENST00000584811 COL5A1-AS1Q5SY13 56 aa11.88□□□□□ -0.51
TVP23C-210ENST00000584811 OR10J6PQ8NGY7 276 aa11.88□□□□□ -0.51
TVP23C-210ENST00000584811 SCRT2Q9NQ03 307 aa11.88□□□□□ -0.51
TVP23C-210ENST00000584811 PEF1Q9UBV8 284 aaKnown RBP11.88□□□□□ -0.51
TVP23C-210ENST00000584811 IGKV3-20P01619 116 aa11.88□□□□□ -0.51
TVP23C-210ENST00000584811 LEPP41159 167 aa11.88□□□□□ -0.51
TVP23C-210ENST00000584811 ANXA2RQ3ZCQ2 193 aa11.88□□□□□ -0.51
TVP23C-210ENST00000584811 ST20Q9HBF5 79 aa11.88□□□□□ -0.51
TVP23C-210ENST00000584811 HIST2H2BCQ6DN03 193 aa11.87□□□□□ -0.51
TVP23C-210ENST00000584811 ATP6V0BQ99437 205 aa11.87□□□□□ -0.51
TVP23C-210ENST00000584811 MAP1LC3AQ9H492 121 aa11.87□□□□□ -0.51
TVP23C-210ENST00000584811 SMPXQ9UHP9 88 aa11.87□□□□□ -0.51
TVP23C-210ENST00000584811 MRPS16Q9Y3D3 137 aaKnown RBP11.87□□□□□ -0.51
TVP23C-210ENST00000584811 GOLT1BQ9Y3E0 138 aa11.87□□□□□ -0.51
TVP23C-210ENST00000584811 A0A0G2JLM5 398 aa11.86□□□□□ -0.51
TVP23C-210ENST00000584811 H3BUA1 57 aa11.86□□□□□ -0.51
TVP23C-210ENST00000584811 MTORP42345 2549 aa11.86□□□□□ -0.51
TVP23C-210ENST00000584811 CR1P17927 2039 aa11.86□□□□□ -0.51
TVP23C-210ENST00000584811 HSBP1L1C9JCN9 74 aa11.86□□□□□ -0.51
TVP23C-210ENST00000584811 SLC25A16P16260 332 aa11.86□□□□□ -0.51
TVP23C-210ENST00000584811 C18orf65Q6ZTR6 163 aa11.86□□□□□ -0.51
TVP23C-210ENST00000584811 IFI27L1Q96BM0 104 aa11.85□□□□□ -0.51
TVP23C-210ENST00000584811 MUC4Q99102 2169 aa11.85□□□□□ -0.51
TVP23C-210ENST00000584811 ITPR2Q14571 2701 aa11.85□□□□□ -0.51
TVP23C-210ENST00000584811 NUDT3O95989 172 aa11.85□□□□□ -0.51
TVP23C-210ENST00000584811 ZNF688P0C7X2 276 aa11.85□□□□□ -0.51
TVP23C-210ENST00000584811 SLC25A34Q6PIV7 304 aa11.85□□□□□ -0.51
TVP23C-210ENST00000584811 MRPL52Q86TS9 123 aaKnown RBP11.85□□□□□ -0.51
TVP23C-210ENST00000584811 NRACQ8N912 160 aa11.85□□□□□ -0.51
TVP23C-210ENST00000584811 WNK1Q9H4A3 2382 aa11.85□□□□□ -0.51
TVP23C-210ENST00000584811 C14orf178Q8N769 122 aaPredicted RBP11.85□□□□□ -0.51
TVP23C-210ENST00000584811 OR2K2Q8NGT1 345 aa11.85□□□□□ -0.51
TVP23C-210ENST00000584811 CBY1Q9Y3M2 126 aa11.85□□□□□ -0.51
TVP23C-210ENST00000584811 HOXA3O43365 443 aaPredicted RBP11.84□□□□□ -0.51
TVP23C-210ENST00000584811 SYNJ2BPP57105 145 aa11.84□□□□□ -0.51
TVP23C-210ENST00000584811 DEFB136Q30KP8 78 aa11.84□□□□□ -0.51
TVP23C-210ENST00000584811 DCANP1Q8TF63 244 aa11.84□□□□□ -0.51
TVP23C-210ENST00000584811 TMEM158Q8WZ71 300 aa11.84□□□□□ -0.51
TVP23C-210ENST00000584811 LINC00477Q96M19 166 aa11.84□□□□□ -0.51
TVP23C-210ENST00000584811 IGHV4-31P0DP07 118 aa11.84□□□□□ -0.51
TVP23C-210ENST00000584811 S100A4P26447 101 aaKnown RBP11.84□□□□□ -0.51
TVP23C-210ENST00000584811 IGLV2-18A0A075B6J9 118 aa11.83□□□□□ -0.52
TVP23C-210ENST00000584811 DLEU1O43261 78 aa11.83□□□□□ -0.52
TVP23C-210ENST00000584811 BRI3O95415 125 aa11.83□□□□□ -0.52
TVP23C-210ENST00000584811 GATA3P23771 443 aa11.83□□□□□ -0.52
TVP23C-210ENST00000584811 DSCR9P59020 149 aa11.83□□□□□ -0.52
TVP23C-210ENST00000584811 RPL39LQ96EH5 51 aaKnown RBP11.83□□□□□ -0.52
TVP23C-210ENST00000584811 TTTY13Q9BZ97 58 aa11.83□□□□□ -0.52
TVP23C-210ENST00000584811 JPT2Q9H910 190 aa11.83□□□□□ -0.52
TVP23C-210ENST00000584811 TRAV12-2A0A075B6T6 113 aa11.82□□□□□ -0.52
TVP23C-210ENST00000584811 OVOL1O14753 267 aa11.82□□□□□ -0.52
TVP23C-210ENST00000584811 PPP1R14DQ9NXH3 145 aa11.82□□□□□ -0.52
TVP23C-210ENST00000584811 PPBPP02775 128 aa11.82□□□□□ -0.52
TVP23C-210ENST00000584811 FAM19A4Q96LR4 140 aa11.82□□□□□ -0.52
TVP23C-210ENST00000584811 DUX3Q96PT4 197 aa11.82□□□□□ -0.52
TVP23C-210ENST00000584811 TRAV21A0A0B4J279 112 aa11.82□□□□□ -0.52
TVP23C-210ENST00000584811 PSMG4Q5JS54 123 aa11.82□□□□□ -0.52
TVP23C-210ENST00000584811 Q5PR19 223 aa11.82□□□□□ -0.52
TVP23C-210ENST00000584811 C2orf91Q6ZV80 131 aa11.82□□□□□ -0.52
TVP23C-210ENST00000584811 IGHV4OR15-8A0A075B7B6 117 aa11.81□□□□□ -0.52
TVP23C-210ENST00000584811 A0A087WW49 117 aa11.81□□□□□ -0.52
TVP23C-210ENST00000584811 RNASE3P12724 160 aaKnown RBP11.81□□□□□ -0.52
TVP23C-210ENST00000584811 MS4A6AQ9H2W1 248 aa11.81□□□□□ -0.52
TVP23C-210ENST00000584811 TRAV12-3A0A0B4J271 114 aa11.81□□□□□ -0.52
TVP23C-210ENST00000584811 CD5LO43866 347 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms