RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 LEPP41159 167 aa10.94□□□□□ -0.66
MKS1-211ENST00000581761 PROK1P58294 105 aa10.94□□□□□ -0.66
MKS1-211ENST00000581761 EBLN2Q6P2I7 272 aa10.94□□□□□ -0.66
MKS1-211ENST00000581761 LINC00518Q8N0U6 118 aa10.94□□□□□ -0.66
MKS1-211ENST00000581761 TMEM256Q8N2U0 113 aa10.94□□□□□ -0.66
MKS1-211ENST00000581761 GATD1Q8NB37 220 aa10.94□□□□□ -0.66
MKS1-211ENST00000581761 TP53TG3Q9ULZ0 132 aa10.94□□□□□ -0.66
MKS1-211ENST00000581761 MUC21A0A0G2JKD1 596 aa10.93□□□□□ -0.66
MKS1-211ENST00000581761 A0A0J9YX75 114 aa10.93□□□□□ -0.66
MKS1-211ENST00000581761 MUC21A0A140T8X8 626 aa10.93□□□□□ -0.66
MKS1-211ENST00000581761 F2Z2F3 143 aa10.93□□□□□ -0.66
MKS1-211ENST00000581761 DUSP14O95147 198 aaKnown RBP10.93□□□□□ -0.66
MKS1-211ENST00000581761 SSTP61278 116 aa10.93□□□□□ -0.66
MKS1-211ENST00000581761 OR10J3Q5JRS4 329 aa10.93□□□□□ -0.66
MKS1-211ENST00000581761 MUC21Q5SSG8 566 aa10.93□□□□□ -0.66
MKS1-211ENST00000581761 Q6ZQT7 251 aa10.93□□□□□ -0.66
MKS1-211ENST00000581761 OR10D4PQ8NGN7 298 aa10.93□□□□□ -0.66
MKS1-211ENST00000581761 HIST1H2BLQ99880 126 aa10.93□□□□□ -0.66
MKS1-211ENST00000581761 NAGKQ9UJ70 344 aa10.93□□□□□ -0.66
MKS1-211ENST00000581761 PKD1L1Q8TDX9 2849 aa10.92□□□□□ -0.66
MKS1-211ENST00000581761 AMBPP02760 352 aa10.92□□□□□ -0.66
MKS1-211ENST00000581761 DEFB114Q30KQ6 69 aa10.92□□□□□ -0.66
MKS1-211ENST00000581761 FOXI2Q6ZQN5 318 aa10.92□□□□□ -0.66
MKS1-211ENST00000581761 ZNF575Q86XF7 245 aa10.92□□□□□ -0.66
MKS1-211ENST00000581761 APRG1Q8IVJ8 170 aa10.92□□□□□ -0.66
MKS1-211ENST00000581761 TMEM61Q8N0U2 210 aa10.92□□□□□ -0.66
MKS1-211ENST00000581761 TMEM18Q96B42 140 aa10.92□□□□□ -0.66
MKS1-211ENST00000581761 ODF3Q96PU9 254 aa10.92□□□□□ -0.66
MKS1-211ENST00000581761 ALKBH7Q9BT30 221 aaPredicted RBP10.92□□□□□ -0.66
MKS1-211ENST00000581761 LOC102724200A0A096LPH7 203 aaPredicted RBP10.91□□□□□ -0.66
MKS1-211ENST00000581761 NUPR1O60356 82 aa10.91□□□□□ -0.66
MKS1-211ENST00000581761 SERF1AO75920 110 aa10.91□□□□□ -0.66
MKS1-211ENST00000581761 TWIST1Q15672 202 aa10.91□□□□□ -0.66
MKS1-211ENST00000581761 IQCJQ1A5X6 159 aa10.91□□□□□ -0.66
MKS1-211ENST00000581761 NSUN5P1Q3KNT7 163 aa10.91□□□□□ -0.66
MKS1-211ENST00000581761 C3orf56Q8N813 242 aa10.91□□□□□ -0.66
MKS1-211ENST00000581761 PACRGQ96M98 296 aaPredicted RBP10.91□□□□□ -0.66
MKS1-211ENST00000581761 KLLNB2CW77 178 aa10.9□□□□□ -0.66
MKS1-211ENST00000581761 IGKV3-20P01619 116 aa10.9□□□□□ -0.66
MKS1-211ENST00000581761 SMIM6P0DI80 62 aa10.9□□□□□ -0.66
MKS1-211ENST00000581761 LINC00310P59036 64 aa10.9□□□□□ -0.66
MKS1-211ENST00000581761 DEFB131AP59861 70 aa10.9□□□□□ -0.66
MKS1-211ENST00000581761 KIR3DS1Q14943 382 aa10.9□□□□□ -0.66
MKS1-211ENST00000581761 CD300EQ496F6 205 aaPredicted RBP10.9□□□□□ -0.66
MKS1-211ENST00000581761 ZNF493Q6ZR52 646 aa10.9□□□□□ -0.66
MKS1-211ENST00000581761 C18orf32Q8TCD1 76 aa10.9□□□□□ -0.66
MKS1-211ENST00000581761 C12orf57Q99622 126 aa10.9□□□□□ -0.66
MKS1-211ENST00000581761 TRAV25A0A0B4J276 109 aa10.89□□□□□ -0.67
MKS1-211ENST00000581761 OR4C46A6NHA9 309 aa10.89□□□□□ -0.67
MKS1-211ENST00000581761 ADARB2-AS1A8MUL3 147 aa10.89□□□□□ -0.67
MKS1-211ENST00000581761 ESDP10768 282 aa10.89□□□□□ -0.67
MKS1-211ENST00000581761 ANXA2RQ3ZCQ2 193 aa10.89□□□□□ -0.67
MKS1-211ENST00000581761 TRRAPQ9Y4A5 3859 aa10.88□□□□□ -0.67
MKS1-211ENST00000581761 C7orf71A4D174 169 aa10.88□□□□□ -0.67
MKS1-211ENST00000581761 KNCNA6PVL3 124 aa10.88□□□□□ -0.67
MKS1-211ENST00000581761 H3BVH4 76 aa10.88□□□□□ -0.67
MKS1-211ENST00000581761 NTF3P20783 257 aa10.88□□□□□ -0.67
MKS1-211ENST00000581761 TSPOP30536 169 aa10.88□□□□□ -0.67
MKS1-211ENST00000581761 KRTAP10-3P60369 221 aa10.88□□□□□ -0.67
MKS1-211ENST00000581761 KCNS1Q96KK3 526 aa10.88□□□□□ -0.67
MKS1-211ENST00000581761 SPAG8Q99932 426 aaPredicted RBP10.88□□□□□ -0.67
MKS1-211ENST00000581761 CNFNQ9BYD5 112 aa10.88□□□□□ -0.67
MKS1-211ENST00000581761 TIMM8BQ9Y5J9 83 aaPredicted RBP10.88□□□□□ -0.67
MKS1-211ENST00000581761 SNAI2O43623 268 aa10.87□□□□□ -0.67
MKS1-211ENST00000581761 ASIPP42127 132 aa10.87□□□□□ -0.67
MKS1-211ENST00000581761 CACNG7P62955 275 aa10.87□□□□□ -0.67
MKS1-211ENST00000581761 FAM104BQ5XKR9 115 aa10.87□□□□□ -0.67
MKS1-211ENST00000581761 NDUFA11Q86Y39 141 aa10.87□□□□□ -0.67
MKS1-211ENST00000581761 RCHY1Q96PM5 261 aa10.87□□□□□ -0.67
MKS1-211ENST00000581761 MAP6D1Q9H9H5 199 aa10.87□□□□□ -0.67
MKS1-211ENST00000581761 SIGLEC8Q9NYZ4 499 aa10.87□□□□□ -0.67
MKS1-211ENST00000581761 TRAV12-3A0A0B4J271 114 aa10.86□□□□□ -0.67
MKS1-211ENST00000581761 OR5AL1P0C617 328 aa10.86□□□□□ -0.67
MKS1-211ENST00000581761 S100A4P26447 101 aaKnown RBP10.86□□□□□ -0.67
MKS1-211ENST00000581761 AMN1Q8IY45 258 aa10.86□□□□□ -0.67
MKS1-211ENST00000581761 SAMD10Q9BYL1 202 aa10.86□□□□□ -0.67
MKS1-211ENST00000581761 TMEM191AQ9H0A3 160 aa10.86□□□□□ -0.67
MKS1-211ENST00000581761 MSRB1Q9NZV6 116 aa10.86□□□□□ -0.67
MKS1-211ENST00000581761 M0R2Z0 102 aa10.85□□□□□ -0.67
MKS1-211ENST00000581761 SAP30O75446 220 aa10.85□□□□□ -0.67
MKS1-211ENST00000581761 MED14OSP0DP75 135 aa10.85□□□□□ -0.67
MKS1-211ENST00000581761 HLA-DRB4P13762 266 aa10.85□□□□□ -0.67
MKS1-211ENST00000581761 CDKN1BP46527 198 aa10.85□□□□□ -0.67
MKS1-211ENST00000581761 SPINK13Q1W4C9 94 aa10.85□□□□□ -0.67
MKS1-211ENST00000581761 MRPL51Q4U2R6 128 aaKnown RBP10.85□□□□□ -0.67
MKS1-211ENST00000581761 SPANXN1Q5VSR9 72 aa10.85□□□□□ -0.67
MKS1-211ENST00000581761 FAM159AQ6UWV7 190 aa10.85□□□□□ -0.67
MKS1-211ENST00000581761 OR10AG1Q8NH19 301 aa10.85□□□□□ -0.67
MKS1-211ENST00000581761 HLA-DRB4X5D2U9 266 aa10.85□□□□□ -0.67
MKS1-211ENST00000581761 MGAM2Q2M2H8 2515 aa10.84□□□□□ -0.67
MKS1-211ENST00000581761 TRAV12-2A0A075B6T6 113 aa10.84□□□□□ -0.67
MKS1-211ENST00000581761 GNRH2O43555 120 aa10.84□□□□□ -0.67
MKS1-211ENST00000581761 PMCHP20382 165 aa10.84□□□□□ -0.67
MKS1-211ENST00000581761 ZNF124Q15973 351 aa10.84□□□□□ -0.67
MKS1-211ENST00000581761 PYY3Q5JQD4 70 aa10.84□□□□□ -0.67
MKS1-211ENST00000581761 RNASEKQ6P5S7 137 aaKnown RBP10.84□□□□□ -0.67
MKS1-211ENST00000581761 AMTNQ6UX39 209 aa10.84□□□□□ -0.67
MKS1-211ENST00000581761 SMIM15Q7Z3B0 74 aa10.84□□□□□ -0.67
MKS1-211ENST00000581761 D6R8Y8 96 aa10.83□□□□□ -0.68
MKS1-211ENST00000581761 H3BMM0 161 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms