RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 OXLD1Q5BKU9 147 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 LYZL1Q6UWQ5 148 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 AMTNQ6UX39 209 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 ATP5L2Q7Z4Y8 100 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 TMEM61Q8N0U2 210 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 ZNF491Q8N8L2 437 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 Q8N9W7 124 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 NPBQ8NG41 125 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 IMMP2LQ96T52 175 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 FAM110AQ9BQ89 295 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 PMCHL2Q9BQD1 86 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 NDUFA12Q9UI09 145 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 TRAV9-1A0A075B6T8 112 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 ZNF503-AS2A6NEH8 195 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 LYRM9A8MSI8 78 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 VWC2LB2RUY7 222 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 SLC25A34Q6PIV7 304 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 OR11H7Q8NGC8 314 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 LINC00479Q96M42 142 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 C20orf144Q9BQM9 153 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 HSPB9Q9BQS6 159 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 SLC25A2Q9BXI2 301 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 SLC17A3O00476 420 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 DPM2O94777 84 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 STAG3L3P0CL85 134 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 PRB4P10163 310 aaPredicted RBP2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 HLA-DRB4P13762 266 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 XCL1P47992 114 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 RPL23P62829 140 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 LY6G6FQ5SQ64 297 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 DNAJC30Q96LL9 226 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 TIMM21Q9BVV7 248 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 HLA-DRB4X5D2U9 266 aa2.29□□□□□ -2.04
SMCHD1-203ENST00000577880 ADAMTS9Q9P2N4 1935 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 IGHG4P01861 327 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 DIAPH2-AS1Q14236 149 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 MLANAQ16655 118 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 RNF151Q2KHN1 245 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 ZNF506Q5JVG8 444 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 WDR86Q86TI4 376 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 DEFB104AQ8WTQ1 72 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 OVOL2Q9BRP0 275 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 KLK12Q9UKR0 248 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 LENEPQ9Y5L5 61 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 IGKV1D-8A0A087WSZ0 117 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 NDUFA1O15239 70 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 TYMSP04818 313 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 ZNF25P17030 456 aaPredicted RBP2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 SNRPEP62304 92 aaKnown RBP2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 FHL1Q13642 323 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 GAGE2EQ4V326 116 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 BBC3Q96PG8 261 aaPredicted RBP2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 GAGE2DQ9UEU5 116 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 EPG5Q9HCE0 2579 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 FBN3Q75N90 2809 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 SDHAF1A6NFY7 115 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 CRYGDP07320 174 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 LINC00205P59089 165 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 KRTAP10-9P60411 292 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 B9D2Q9BPU9 175 aa2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 RSPO3Q9BXY4 272 aaPredicted RBP2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 RNASE7Q9H1E1 156 aaKnown RBP2.28□□□□□ -2.04
SMCHD1-203ENST00000577880 TRBV19A0A075B6N1 114 aa2.28□□□□□ -2.05
SMCHD1-203ENST00000577880 IGKV2-24A0A0C4DH68 120 aa2.28□□□□□ -2.05
SMCHD1-203ENST00000577880 A0A1B0GWB2 263 aa2.28□□□□□ -2.05
SMCHD1-203ENST00000577880 C15orf65H3BRN8 121 aa2.28□□□□□ -2.05
SMCHD1-203ENST00000577880 COX7A2LO14548 114 aa2.28□□□□□ -2.05
SMCHD1-203ENST00000577880 RBMY1FQ15415 496 aaKnown RBP2.28□□□□□ -2.05
SMCHD1-203ENST00000577880 TMEM14EPQ6UXP3 125 aa2.28□□□□□ -2.05
SMCHD1-203ENST00000577880 PUSL1Q8N0Z8 303 aaKnown RBP2.28□□□□□ -2.05
SMCHD1-203ENST00000577880 Q8N7P7 452 aa2.28□□□□□ -2.05
SMCHD1-203ENST00000577880 MGST2Q99735 147 aa2.28□□□□□ -2.05
SMCHD1-203ENST00000577880 TPSG1Q9NRR2 321 aa2.28□□□□□ -2.05
SMCHD1-203ENST00000577880 F8P00451 2351 aa2.28□□□□□ -2.05
SMCHD1-203ENST00000577880 WDFY3Q8IZQ1 3526 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 PLXND1Q9Y4D7 1925 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 DMDP11532 3685 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 NUP210Q8TEM1 1887 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 IGLV10-54A0A075B6I4 117 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 A0A0A6YYD4 124 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 H3BRN7 92 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 K7EQD1 137 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 SIVA1O15304 175 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 WT1-ASQ06250 92 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 LBHQ53QV2 105 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 FAM222AQ5U5X8 452 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 SUMO4Q6EEV6 95 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 SFTA2Q6UW10 78 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 ZNF747Q9BV97 191 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 TMEM242Q9NWH2 141 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 LAMTOR2Q9Y2Q5 125 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 PAM16Q9Y3D7 125 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 NCR2O95944 276 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 IGLC1P0CG04 106 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 CFPP27918 469 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 HERVK_113P63121 156 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 DAZ2Q13117 558 aaKnown RBP2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 LINC00322Q6ZN03 302 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 DAZ4Q86SG3 579 aaKnown RBP2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 LINC00518Q8N0U6 118 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms