RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 TIMM8BQ9Y5J9 83 aaPredicted RBP12.29□□□□□ -0.44
POLR2A-201ENST00000572844 FCER1GP30273 86 aa12.28□□□□□ -0.44
POLR2A-201ENST00000572844 Q8N8P6 123 aa12.28□□□□□ -0.44
POLR2A-201ENST00000572844 MAPK1IP1LQ8NDC0 245 aa12.28□□□□□ -0.44
POLR2A-201ENST00000572844 OR2K2Q8NGT1 345 aa12.28□□□□□ -0.44
POLR2A-201ENST00000572844 SCRT2Q9NQ03 307 aa12.28□□□□□ -0.44
POLR2A-201ENST00000572844 LGALS9O00182 355 aa12.28□□□□□ -0.44
POLR2A-201ENST00000572844 KRTAP10-9P60411 292 aa12.28□□□□□ -0.44
POLR2A-201ENST00000572844 RNF152Q8N8N0 203 aa12.28□□□□□ -0.44
POLR2A-201ENST00000572844 MRAP2Q96G30 205 aa12.28□□□□□ -0.44
POLR2A-201ENST00000572844 ZNF702PQ9H963 129 aa12.28□□□□□ -0.44
POLR2A-201ENST00000572844 CHD6Q8TD26 2715 aa12.27□□□□□ -0.44
POLR2A-201ENST00000572844 IGLV2-18A0A075B6J9 118 aa12.27□□□□□ -0.45
POLR2A-201ENST00000572844 H3BVH4 76 aa12.27□□□□□ -0.45
POLR2A-201ENST00000572844 GAS8-AS1O95177 125 aa12.27□□□□□ -0.45
POLR2A-201ENST00000572844 LGALS1P09382 135 aaKnown RBP12.27□□□□□ -0.45
POLR2A-201ENST00000572844 ASIPP42127 132 aa12.27□□□□□ -0.45
POLR2A-201ENST00000572844 Q5PR19 223 aa12.27□□□□□ -0.45
POLR2A-201ENST00000572844 IFI27L1Q96BM0 104 aa12.27□□□□□ -0.45
POLR2A-201ENST00000572844 KLLNB2CW77 178 aa12.26□□□□□ -0.45
POLR2A-201ENST00000572844 H0Y8G0 127 aa12.26□□□□□ -0.45
POLR2A-201ENST00000572844 BATFQ16520 125 aa12.26□□□□□ -0.45
POLR2A-201ENST00000572844 SLC25A34Q6PIV7 304 aa12.26□□□□□ -0.45
POLR2A-201ENST00000572844 NRACQ8N912 160 aa12.26□□□□□ -0.45
POLR2A-201ENST00000572844 SVEP1Q4LDE5 3571 aa12.26□□□□□ -0.45
POLR2A-201ENST00000572844 C10orf99Q6UWK7 81 aa12.26□□□□□ -0.45
POLR2A-201ENST00000572844 UBE2E2Q96LR5 201 aa12.26□□□□□ -0.45
POLR2A-201ENST00000572844 ODF3Q96PU9 254 aa12.26□□□□□ -0.45
POLR2A-201ENST00000572844 MCRIP2Q9BUT9 160 aaKnown RBP12.26□□□□□ -0.45
POLR2A-201ENST00000572844 GOLT1BQ9Y3E0 138 aa12.26□□□□□ -0.45
POLR2A-201ENST00000572844 KMT2BQ9UMN6 2715 aaPredicted RBP12.26□□□□□ -0.45
POLR2A-201ENST00000572844 F6UB75 175 aa12.25□□□□□ -0.45
POLR2A-201ENST00000572844 RNASE4P34096 147 aaKnown RBP12.25□□□□□ -0.45
POLR2A-201ENST00000572844 DEFB1P60022 68 aa12.25□□□□□ -0.45
POLR2A-201ENST00000572844 ANXA2RQ3ZCQ2 193 aa12.25□□□□□ -0.45
POLR2A-201ENST00000572844 PMCHL2Q9BQD1 86 aa12.25□□□□□ -0.45
POLR2A-201ENST00000572844 EDN2P20800 178 aa12.25□□□□□ -0.45
POLR2A-201ENST00000572844 OR1N2Q8NGR9 330 aa12.25□□□□□ -0.45
POLR2A-201ENST00000572844 VPS13CQ709C8 3753 aa12.24□□□□□ -0.45
POLR2A-201ENST00000572844 IGKV3-7A0A075B6H7 116 aa12.24□□□□□ -0.45
POLR2A-201ENST00000572844 GATA1P15976 413 aaPredicted RBP12.24□□□□□ -0.45
POLR2A-201ENST00000572844 Q8N2B8 174 aa12.24□□□□□ -0.45
POLR2A-201ENST00000572844 STPG4Q8N801 248 aa12.24□□□□□ -0.45
POLR2A-201ENST00000572844 S100A4P26447 101 aaKnown RBP12.23□□□□□ -0.45
POLR2A-201ENST00000572844 LEPP41159 167 aa12.23□□□□□ -0.45
POLR2A-201ENST00000572844 J3KRW8 73 aa12.23□□□□□ -0.45
POLR2A-201ENST00000572844 HOXA3O43365 443 aaPredicted RBP12.23□□□□□ -0.45
POLR2A-201ENST00000572844 NXPH4O95158 308 aa12.23□□□□□ -0.45
POLR2A-201ENST00000572844 COX8AP10176 69 aa12.23□□□□□ -0.45
POLR2A-201ENST00000572844 PSMG4Q5JS54 123 aa12.23□□□□□ -0.45
POLR2A-201ENST00000572844 DPH3P1Q9H4G8 78 aa12.23□□□□□ -0.45
POLR2A-201ENST00000572844 K7EQG2 157 aa12.22□□□□□ -0.45
POLR2A-201ENST00000572844 SRD5A1P18405 259 aa12.22□□□□□ -0.45
POLR2A-201ENST00000572844 FXYD7P58549 80 aa12.22□□□□□ -0.45
POLR2A-201ENST00000572844 PHLDA3Q9Y5J5 127 aa12.22□□□□□ -0.45
POLR2A-201ENST00000572844 CELSR1Q9NYQ6 3014 aa12.22□□□□□ -0.45
POLR2A-201ENST00000572844 GAGE1Q13065 139 aa12.22□□□□□ -0.45
POLR2A-201ENST00000572844 ZFHX3Q15911 3703 aa12.22□□□□□ -0.45
POLR2A-201ENST00000572844 M0R381 172 aa12.21□□□□□ -0.45
POLR2A-201ENST00000572844 RNASE3P12724 160 aaKnown RBP12.21□□□□□ -0.45
POLR2A-201ENST00000572844 POM121L12Q8N7R1 296 aa12.21□□□□□ -0.45
POLR2A-201ENST00000572844 Q96MF0 132 aa12.21□□□□□ -0.45
POLR2A-201ENST00000572844 HINT1P49773 126 aaPredicted RBP12.2□□□□□ -0.46
POLR2A-201ENST00000572844 SNRPD3P62318 126 aaKnown RBP12.2□□□□□ -0.46
POLR2A-201ENST00000572844 LAGE3Q14657 143 aa12.2□□□□□ -0.46
POLR2A-201ENST00000572844 KRTAP1-3Q8IUG1 177 aa12.2□□□□□ -0.46
POLR2A-201ENST00000572844 C20orf78Q9BR46 151 aa12.2□□□□□ -0.46
POLR2A-201ENST00000572844 CELSR2Q9HCU4 2923 aa12.2□□□□□ -0.46
POLR2A-201ENST00000572844 IGHV4OR15-8A0A075B7B6 117 aa12.2□□□□□ -0.46
POLR2A-201ENST00000572844 A0A087WW49 117 aa12.2□□□□□ -0.46
POLR2A-201ENST00000572844 K7EMI3 77 aa12.2□□□□□ -0.46
POLR2A-201ENST00000572844 ZNF25P17030 456 aaPredicted RBP12.2□□□□□ -0.46
POLR2A-201ENST00000572844 KIR3DS1Q14943 382 aa12.2□□□□□ -0.46
POLR2A-201ENST00000572844 WFDC3Q8IUB2 231 aa12.2□□□□□ -0.46
POLR2A-201ENST00000572844 TMEM158Q8WZ71 300 aa12.2□□□□□ -0.46
POLR2A-201ENST00000572844 ZMAT4Q9H898 229 aa12.2□□□□□ -0.46
POLR2A-201ENST00000572844 A0A0J9YX75 114 aa12.19□□□□□ -0.46
POLR2A-201ENST00000572844 GNRH2O43555 120 aa12.19□□□□□ -0.46
POLR2A-201ENST00000572844 CD5LO43866 347 aa12.19□□□□□ -0.46
POLR2A-201ENST00000572844 ATP5LO75964 103 aa12.19□□□□□ -0.46
POLR2A-201ENST00000572844 SYNJ2BPP57105 145 aa12.19□□□□□ -0.46
POLR2A-201ENST00000572844 TEX29Q8N6K0 151 aa12.19□□□□□ -0.46
POLR2A-201ENST00000572844 SMIM2Q9BVW6 85 aa12.19□□□□□ -0.46
POLR2A-201ENST00000572844 FBN2P35556 2912 aa12.19□□□□□ -0.46
POLR2A-201ENST00000572844 USP9YO00507 2555 aaPredicted RBP12.19□□□□□ -0.46
POLR2A-201ENST00000572844 TRAV26-2A0A0B4J265 109 aa12.18□□□□□ -0.46
POLR2A-201ENST00000572844 PPP1R17O96001 155 aa12.18□□□□□ -0.46
POLR2A-201ENST00000572844 HOXD3P31249 432 aaPredicted RBP12.18□□□□□ -0.46
POLR2A-201ENST00000572844 AP1S3Q96PC3 154 aa12.18□□□□□ -0.46
POLR2A-201ENST00000572844 TMEM208Q9BTX3 173 aa12.18□□□□□ -0.46
POLR2A-201ENST00000572844 CENPEQ02224 2701 aa12.18□□□□□ -0.46
POLR2A-201ENST00000572844 C7orf71A4D174 169 aa12.18□□□□□ -0.46
POLR2A-201ENST00000572844 TFPI2P48307 235 aa12.18□□□□□ -0.46
POLR2A-201ENST00000572844 FAM159AQ6UWV7 190 aa12.18□□□□□ -0.46
POLR2A-201ENST00000572844 C12orf54Q6X4T0 127 aa12.18□□□□□ -0.46
POLR2A-201ENST00000572844 TMEM86BQ8N661 226 aa12.18□□□□□ -0.46
POLR2A-201ENST00000572844 DLEU1O43261 78 aa12.17□□□□□ -0.46
POLR2A-201ENST00000572844 ZNF688P0C7X2 276 aa12.17□□□□□ -0.46
POLR2A-201ENST00000572844 SMIM17P0DL12 118 aa12.17□□□□□ -0.46
POLR2A-201ENST00000572844 ANKRD39Q53RE8 183 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms