RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SPTAN1Q13813 2472 aaKnown RBP13.33□□□□□ -0.28
SCARF1-205ENST00000571272 AMTNQ6UX39 209 aa13.32□□□□□ -0.28
SCARF1-205ENST00000571272 TMEM219Q86XT9 240 aa13.32□□□□□ -0.28
SCARF1-205ENST00000571272 ZNF479Q96JC4 524 aa13.32□□□□□ -0.28
SCARF1-205ENST00000571272 C20orf173Q96LM9 149 aa13.32□□□□□ -0.28
SCARF1-205ENST00000571272 SMIM2Q9BVW6 85 aa13.32□□□□□ -0.28
SCARF1-205ENST00000571272 A0A1W2PPR1 153 aa13.31□□□□□ -0.28
SCARF1-205ENST00000571272 PRSS47A8MTI9 375 aa13.31□□□□□ -0.28
SCARF1-205ENST00000571272 E9PLD3 99 aa13.31□□□□□ -0.28
SCARF1-205ENST00000571272 WFDC2Q14508 124 aa13.31□□□□□ -0.28
SCARF1-205ENST00000571272 C12orf74Q32Q52 190 aa13.31□□□□□ -0.28
SCARF1-205ENST00000571272 MTURNQ8N3F0 131 aa13.31□□□□□ -0.28
SCARF1-205ENST00000571272 H3BMG7 143 aa13.31□□□□□ -0.28
SCARF1-205ENST00000571272 UBE2E1P51965 193 aa13.31□□□□□ -0.28
SCARF1-205ENST00000571272 HIF1ANQ9NWT6 349 aa13.31□□□□□ -0.28
SCARF1-205ENST00000571272 CELSR1Q9NYQ6 3014 aa13.31□□□□□ -0.28
SCARF1-205ENST00000571272 RPL39LQ96EH5 51 aaKnown RBP13.3□□□□□ -0.28
SCARF1-205ENST00000571272 PLNP26678 52 aa13.3□□□□□ -0.28
SCARF1-205ENST00000571272 FOXI2Q6ZQN5 318 aa13.3□□□□□ -0.28
SCARF1-205ENST00000571272 SCGB3A1Q96QR1 104 aa13.3□□□□□ -0.28
SCARF1-205ENST00000571272 IGHV4-4A0A075B6R2 117 aa13.3□□□□□ -0.28
SCARF1-205ENST00000571272 F8VRH5 84 aa13.3□□□□□ -0.28
SCARF1-205ENST00000571272 H7C1H1 209 aa13.3□□□□□ -0.28
SCARF1-205ENST00000571272 HLA-DRB4P13762 266 aa13.3□□□□□ -0.28
SCARF1-205ENST00000571272 LCNL1Q6ZST4 164 aa13.3□□□□□ -0.28
SCARF1-205ENST00000571272 C14orf178Q8N769 122 aaPredicted RBP13.3□□□□□ -0.28
SCARF1-205ENST00000571272 HLA-DRB4X5D2U9 266 aa13.3□□□□□ -0.28
SCARF1-205ENST00000571272 TRBV7-1A0A0A6YYK4 115 aa13.29□□□□□ -0.28
SCARF1-205ENST00000571272 CENPVL3A0A0U1RRI6 287 aa13.29□□□□□ -0.28
SCARF1-205ENST00000571272 S100A4P26447 101 aaKnown RBP13.29□□□□□ -0.28
SCARF1-205ENST00000571272 ATP5G2Q06055 141 aa13.29□□□□□ -0.28
SCARF1-205ENST00000571272 MRPL53Q96EL3 112 aaKnown RBP13.29□□□□□ -0.28
SCARF1-205ENST00000571272 CHTOPQ9Y3Y2 248 aaKnown RBP13.29□□□□□ -0.28
SCARF1-205ENST00000571272 IGHV3OR16-10A0A075B7F0 116 aa13.28□□□□□ -0.28
SCARF1-205ENST00000571272 SUMO2P61956 95 aaKnown RBP13.28□□□□□ -0.28
SCARF1-205ENST00000571272 RASL10AQ92737 203 aa13.28□□□□□ -0.28
SCARF1-205ENST00000571272 U3KQE9 123 aa13.28□□□□□ -0.28
SCARF1-205ENST00000571272 OR11H12B2RN74 326 aa13.28□□□□□ -0.28
SCARF1-205ENST00000571272 SH2D6Q7Z4S9 175 aa13.28□□□□□ -0.28
SCARF1-205ENST00000571272 OR11H1Q8NG94 326 aa13.28□□□□□ -0.28
SCARF1-205ENST00000571272 OR11H2Q8NH07 326 aa13.28□□□□□ -0.28
SCARF1-205ENST00000571272 DEFB104AQ8WTQ1 72 aa13.28□□□□□ -0.28
SCARF1-205ENST00000571272 MRAP2Q96G30 205 aa13.28□□□□□ -0.28
SCARF1-205ENST00000571272 IGKV3-7A0A075B6H7 116 aa13.27□□□□□ -0.28
SCARF1-205ENST00000571272 MGPP08493 103 aa13.27□□□□□ -0.28
SCARF1-205ENST00000571272 CYSLTR1Q9Y271 337 aa13.27□□□□□ -0.28
SCARF1-205ENST00000571272 HIVEP3Q5T1R4 2406 aa13.27□□□□□ -0.29
SCARF1-205ENST00000571272 UNQ9165/PRO28630Q6UXU0 137 aa13.27□□□□□ -0.29
SCARF1-205ENST00000571272 TRBV12-3P01733 135 aa13.26□□□□□ -0.29
SCARF1-205ENST00000571272 GLMPQ8WWB7 406 aa13.26□□□□□ -0.29
SCARF1-205ENST00000571272 GTSF1LQ9H1H1 148 aa13.26□□□□□ -0.29
SCARF1-205ENST00000571272 TAL2Q16559 108 aa13.26□□□□□ -0.29
SCARF1-205ENST00000571272 KLK9Q2XQG4 91 aa13.26□□□□□ -0.29
SCARF1-205ENST00000571272 ETDBQ3ZM63 59 aa13.26□□□□□ -0.29
SCARF1-205ENST00000571272 C5orf56Q8N8D9 126 aa13.26□□□□□ -0.29
SCARF1-205ENST00000571272 KLK9Q9UKQ9 250 aa13.26□□□□□ -0.29
SCARF1-205ENST00000571272 PHLDA3Q9Y5J5 127 aa13.26□□□□□ -0.29
SCARF1-205ENST00000571272 TRBV7-3A0A075B6L6 115 aa13.26□□□□□ -0.29
SCARF1-205ENST00000571272 MYMXA0A1B0GTQ4 84 aa13.26□□□□□ -0.29
SCARF1-205ENST00000571272 ORMDL2Q53FV1 153 aa13.26□□□□□ -0.29
SCARF1-205ENST00000571272 ZFAND2AQ8N6M9 145 aa13.26□□□□□ -0.29
SCARF1-205ENST00000571272 TRAV12-1A0A0B4J245 112 aa13.25□□□□□ -0.29
SCARF1-205ENST00000571272 F6UB75 175 aa13.25□□□□□ -0.29
SCARF1-205ENST00000571272 RPL11P62913 178 aaKnown RBP13.25□□□□□ -0.29
SCARF1-205ENST00000571272 TOMM6Q96B49 74 aa13.25□□□□□ -0.29
SCARF1-205ENST00000571272 ANXA2RQ3ZCQ2 193 aa13.25□□□□□ -0.29
SCARF1-205ENST00000571272 C9orf139Q6ZV77 190 aa13.25□□□□□ -0.29
SCARF1-205ENST00000571272 NEXN-AS1Q8NBZ9 246 aa13.25□□□□□ -0.29
SCARF1-205ENST00000571272 ITLN2Q8WWU7 325 aaPredicted RBP13.25□□□□□ -0.29
SCARF1-205ENST00000571272 SPANXB1Q9NS25 103 aaPredicted RBP13.25□□□□□ -0.29
SCARF1-205ENST00000571272 F8W1H4 67 aa13.24□□□□□ -0.29
SCARF1-205ENST00000571272 NPFFO15130 113 aa13.24□□□□□ -0.29
SCARF1-205ENST00000571272 ARL3P36405 182 aa13.24□□□□□ -0.29
SCARF1-205ENST00000571272 C2orf66Q6UXQ4 117 aa13.24□□□□□ -0.29
SCARF1-205ENST00000571272 GPHB5Q86YW7 130 aa13.24□□□□□ -0.29
SCARF1-205ENST00000571272 BPESC1Q9GZL8 116 aa13.24□□□□□ -0.29
SCARF1-205ENST00000571272 UBTD1Q9HAC8 227 aa13.24□□□□□ -0.29
SCARF1-205ENST00000571272 TRAV41A0A0B4J266 112 aa13.24□□□□□ -0.29
SCARF1-205ENST00000571272 GNRH2O43555 120 aa13.24□□□□□ -0.29
SCARF1-205ENST00000571272 RNASE4P34096 147 aaKnown RBP13.24□□□□□ -0.29
SCARF1-205ENST00000571272 DPH3P1Q9H4G8 78 aa13.24□□□□□ -0.29
SCARF1-205ENST00000571272 RAXQ9Y2V3 346 aa13.24□□□□□ -0.29
SCARF1-205ENST00000571272 TSSC4Q9Y5U2 329 aaPredicted RBP13.24□□□□□ -0.29
SCARF1-205ENST00000571272 SCGB2A2Q13296 93 aa13.23□□□□□ -0.29
SCARF1-205ENST00000571272 RRN3P1Q2M238 152 aa13.23□□□□□ -0.29
SCARF1-205ENST00000571272 OR10J6PQ8NGY7 276 aa13.23□□□□□ -0.29
SCARF1-205ENST00000571272 VPS13CQ709C8 3753 aa13.23□□□□□ -0.29
SCARF1-205ENST00000571272 TRAV21A0A0B4J279 112 aa13.23□□□□□ -0.29
SCARF1-205ENST00000571272 ASIPP42127 132 aa13.23□□□□□ -0.29
SCARF1-205ENST00000571272 SAMD13Q5VXD3 122 aa13.23□□□□□ -0.29
SCARF1-205ENST00000571272 BAALCQ8WXS3 180 aa13.23□□□□□ -0.29
SCARF1-205ENST00000571272 LINC00477Q96M19 166 aa13.22□□□□□ -0.29
SCARF1-205ENST00000571272 MAP1AP78559 2803 aaPredicted RBP13.22□□□□□ -0.29
SCARF1-205ENST00000571272 PRSS29PA6NIE9 313 aa13.22□□□□□ -0.29
SCARF1-205ENST00000571272 LGALS1P09382 135 aaKnown RBP13.22□□□□□ -0.29
SCARF1-205ENST00000571272 AZU1P20160 251 aa13.22□□□□□ -0.29
SCARF1-205ENST00000571272 PRADC1Q9BSG0 188 aa13.22□□□□□ -0.29
SCARF1-205ENST00000571272 IGHV3-11P01762 117 aa13.22□□□□□ -0.29
SCARF1-205ENST00000571272 SMAGPQ0VAQ4 97 aa13.22□□□□□ -0.29
SCARF1-205ENST00000571272 NBL1P41271 181 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms