RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 PLCE1Q9P212 2302 aa5.17□□□□□ -1.58
SMG1-217ENST00000569764 FOXA3P55318 350 aaPredicted RBP5.17□□□□□ -1.58
SMG1-217ENST00000569764 RPL7L1Q6DKI1 246 aaKnown RBP5.17□□□□□ -1.58
SMG1-217ENST00000569764 ARL2-SNX15V9GYD0 113 aa5.17□□□□□ -1.58
SMG1-217ENST00000569764 C9orf118A6NHY6 69 aa5.17□□□□□ -1.58
SMG1-217ENST00000569764 ZNF253O75346 499 aa5.17□□□□□ -1.58
SMG1-217ENST00000569764 FXYD3Q14802 87 aa5.17□□□□□ -1.58
SMG1-217ENST00000569764 RBMY1FQ15415 496 aaKnown RBP5.17□□□□□ -1.58
SMG1-217ENST00000569764 Q6ZWC4 215 aa5.17□□□□□ -1.58
SMG1-217ENST00000569764 PMCHL2Q9BQD1 86 aa5.17□□□□□ -1.58
SMG1-217ENST00000569764 IFI27L2Q9H2X8 130 aa5.17□□□□□ -1.58
SMG1-217ENST00000569764 TRBV24-1A0A075B6N3 115 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 IGHV4-59P01825 116 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 TRACP01848 142 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 FCGR3AP08637 254 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 SMDT1Q9H4I9 107 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 TRAPPC1Q9Y5R8 145 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 FAM223BA6NKX1 122 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 ZNF736B4DX44 427 aaPredicted RBP5.16□□□□□ -1.58
SMG1-217ENST00000569764 SRSF9Q13242 221 aaKnown RBP eCLIP5.16□□□□□ -1.58
SMG1-217ENST00000569764 BVES-AS1Q5T3Y7 98 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 UFSP1Q6NVU6 142 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 WDR86Q86TI4 376 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 FAM223AQ8IWN6 122 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 ZNRF1Q8ND25 227 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 PARP12Q9H0J9 701 aaKnown RBP5.16□□□□□ -1.58
SMG1-217ENST00000569764 C16orf95Q9H693 158 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 SMIM26A0A096LP01 95 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 C9JQL5 133 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 TFF1P04155 84 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 CSN1S1P47710 185 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 SUPT4H1P63272 117 aaKnown RBP5.16□□□□□ -1.58
SMG1-217ENST00000569764 YPEL4Q96NS1 127 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 DSCR8Q96T75 97 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 SMR3AQ99954 134 aa5.16□□□□□ -1.58
SMG1-217ENST00000569764 TRAV14DV4A0A0A6YYC5 116 aa5.15□□□□□ -1.58
SMG1-217ENST00000569764 F8W1H4 67 aa5.15□□□□□ -1.58
SMG1-217ENST00000569764 HSPB1P04792 205 aaKnown RBP5.15□□□□□ -1.58
SMG1-217ENST00000569764 MSMPQ1L6U9 139 aa5.15□□□□□ -1.58
SMG1-217ENST00000569764 VAX1Q5SQQ9 334 aa5.15□□□□□ -1.58
SMG1-217ENST00000569764 FAM19A3Q7Z5A8 133 aa5.15□□□□□ -1.58
SMG1-217ENST00000569764 PRIMA1Q86XR5 153 aa5.15□□□□□ -1.58
SMG1-217ENST00000569764 PPP1R1CQ8WVI7 109 aa5.15□□□□□ -1.58
SMG1-217ENST00000569764 SLC25A4P12235 298 aa5.15□□□□□ -1.58
SMG1-217ENST00000569764 KRTAP24-1Q3LI83 254 aa5.15□□□□□ -1.58
SMG1-217ENST00000569764 LINC00305Q7Z4B0 112 aa5.15□□□□□ -1.58
SMG1-217ENST00000569764 SH2D6Q7Z4S9 175 aa5.15□□□□□ -1.58
SMG1-217ENST00000569764 Q6ZVQ6 151 aa5.15□□□□□ -1.59
SMG1-217ENST00000569764 C3orf22Q8N5N4 141 aa5.15□□□□□ -1.59
SMG1-217ENST00000569764 MALRD1Q5VYJ5 2156 aa5.15□□□□□ -1.59
SMG1-217ENST00000569764 TMEM250H0YL14 139 aa5.15□□□□□ -1.59
SMG1-217ENST00000569764 K7ERJ3 54 aa5.15□□□□□ -1.59
SMG1-217ENST00000569764 OPRK1P41145 380 aa5.15□□□□□ -1.59
SMG1-217ENST00000569764 CYCSP99999 105 aaKnown RBP5.15□□□□□ -1.59
SMG1-217ENST00000569764 BPIFA4PQ86YQ2 179 aa5.15□□□□□ -1.59
SMG1-217ENST00000569764 PIFOQ8TCI5 191 aa5.15□□□□□ -1.59
SMG1-217ENST00000569764 NDUFS5O43920 106 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 EGR2P11161 476 aaPredicted RBP5.14□□□□□ -1.59
SMG1-217ENST00000569764 FXYD4P59646 89 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 RRN3P1Q2M238 152 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 SPRNQ5BIV9 151 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 FAM53AQ6NSI3 398 aaPredicted RBP5.14□□□□□ -1.59
SMG1-217ENST00000569764 DPH3Q96FX2 82 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 WWC2-AS2Q96NR7 200 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 H3BRM9 83 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 FLNCQ14315 2725 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 LHFPL1Q86WI0 220 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 GAFA1Q96PS6 74 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 TRGV11A0A075B6L2 103 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 TRAV9-2A0A087WT02 112 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 TEX50A0A1B0GTY4 177 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 C17orf112F2Z3M2 114 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 BMPR1BO00238 502 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 YPEL1O60688 119 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 SLC25A5P05141 298 aaKnown RBP5.14□□□□□ -1.59
SMG1-217ENST00000569764 MORN5Q5VZ52 161 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 PRELID3AQ96N28 172 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 YPEL2Q96QA6 119 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 TIMM17AQ99595 171 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 RABAC1Q9UI14 185 aa5.14□□□□□ -1.59
SMG1-217ENST00000569764 FN1P02751 2386 aaKnown RBP5.13□□□□□ -1.59
SMG1-217ENST00000569764 H3BMG7 143 aa5.13□□□□□ -1.59
SMG1-217ENST00000569764 CRISP2P16562 243 aa5.13□□□□□ -1.59
SMG1-217ENST00000569764 LINC00311Q8N616 119 aa5.13□□□□□ -1.59
SMG1-217ENST00000569764 ABHD14BQ96IU4 210 aa5.13□□□□□ -1.59
SMG1-217ENST00000569764 TMEM191AQ9H0A3 160 aa5.13□□□□□ -1.59
SMG1-217ENST00000569764 MANBALQ9NQG1 85 aa5.13□□□□□ -1.59
SMG1-217ENST00000569764 A0A087WZ39 114 aa5.13□□□□□ -1.59
SMG1-217ENST00000569764 C3orf84H3BNL1 204 aa5.13□□□□□ -1.59
SMG1-217ENST00000569764 BUB1B-PAK6H3BSN5 160 aa5.13□□□□□ -1.59
SMG1-217ENST00000569764 S100A7L2Q5SY68 101 aa5.13□□□□□ -1.59
SMG1-217ENST00000569764 RNF182Q8N6D2 247 aa5.13□□□□□ -1.59
SMG1-217ENST00000569764 NAA60Q9H7X0 242 aa5.13□□□□□ -1.59
SMG1-217ENST00000569764 C17orf98A8MV24 154 aa5.13□□□□□ -1.59
SMG1-217ENST00000569764 OR5C1Q8NGR4 320 aa5.13□□□□□ -1.59
SMG1-217ENST00000569764 PHLDA1Q8WV24 401 aaPredicted RBP5.13□□□□□ -1.59
SMG1-217ENST00000569764 U3KQK5 164 aa5.13□□□□□ -1.59
SMG1-217ENST00000569764 A0A1B0GXF2 115 aa5.12□□□□□ -1.59
SMG1-217ENST00000569764 DUSP14O95147 198 aaKnown RBP5.12□□□□□ -1.59
SMG1-217ENST00000569764 CFHR3Q02985 330 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms